RNA–Protein interactions for RNA: ENST00000569245.5

COMMD4-225, Transcript of COMM domain containing 4, humanhuman

TSL 2

Gene COMMD4, Length 867 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COMMD4-225ENST00000569245 ATP13A4Q4VNC1 1196 aa14.65□□□□□ -0.06
COMMD4-225ENST00000569245 SEL1L3Q68CR1 1132 aa14.65□□□□□ -0.06
COMMD4-225ENST00000569245 TMCO3Q6UWJ1 677 aa14.65□□□□□ -0.06
COMMD4-225ENST00000569245 TTC7BQ86TV6 843 aa14.65□□□□□ -0.06
COMMD4-225ENST00000569245 VSIG1Q86XK7 387 aa14.65□□□□□ -0.06
COMMD4-225ENST00000569245 CREG2Q8IUH2 290 aa14.65□□□□□ -0.06
COMMD4-225ENST00000569245 RASGEF1CQ8N431 466 aa14.65□□□□□ -0.06
COMMD4-225ENST00000569245 LZTR1Q8N653 840 aa14.65□□□□□ -0.06
COMMD4-225ENST00000569245 MFSD2AQ8NA29 543 aa14.65□□□□□ -0.06
COMMD4-225ENST00000569245 FAM71BQ8TC56 605 aa14.65□□□□□ -0.06
COMMD4-225ENST00000569245 RBM41Q96IZ5 413 aaKnown RBP14.65□□□□□ -0.06
COMMD4-225ENST00000569245 ELF4Q99607 663 aaPredicted RBP14.65□□□□□ -0.06
COMMD4-225ENST00000569245 ANGPTL2Q9UKU9 493 aa14.65□□□□□ -0.06
COMMD4-225ENST00000569245 CA5BQ9Y2D0 317 aa14.65□□□□□ -0.06
COMMD4-225ENST00000569245 FADS3Q9Y5Q0 445 aa14.65□□□□□ -0.06
COMMD4-225ENST00000569245 CACNA1EQ15878 2313 aa14.64□□□□□ -0.07
COMMD4-225ENST00000569245 ASCC3Q8N3C0 2202 aaKnown RBP14.64□□□□□ -0.07
COMMD4-225ENST00000569245 ZNF185O15231 689 aa14.64□□□□□ -0.07
COMMD4-225ENST00000569245 FLRT2O43155 660 aa14.64□□□□□ -0.07
COMMD4-225ENST00000569245 XPAP23025 273 aaPredicted RBP14.64□□□□□ -0.07
COMMD4-225ENST00000569245 AMPD1P23109 780 aa14.64□□□□□ -0.07
COMMD4-225ENST00000569245 PMLP29590 882 aa14.64□□□□□ -0.07
COMMD4-225ENST00000569245 PTPN7P35236 360 aa14.64□□□□□ -0.07
COMMD4-225ENST00000569245 ARRB1P49407 418 aaPredicted RBP14.64□□□□□ -0.07
COMMD4-225ENST00000569245 ARSEP51690 589 aa14.64□□□□□ -0.07
COMMD4-225ENST00000569245 NXPH1P58417 271 aa14.64□□□□□ -0.07
COMMD4-225ENST00000569245 COPS2P61201 443 aa14.64□□□□□ -0.07
COMMD4-225ENST00000569245 SGCGQ13326 291 aa14.64□□□□□ -0.07
COMMD4-225ENST00000569245 PDK2Q15119 407 aa14.64□□□□□ -0.07
COMMD4-225ENST00000569245 WHAMMP3Q1A5X7 153 aa14.64□□□□□ -0.07
COMMD4-225ENST00000569245 INAVAQ3KP66 663 aa14.64□□□□□ -0.07
COMMD4-225ENST00000569245 ZFYVE27Q5T4F4 411 aa14.64□□□□□ -0.07
COMMD4-225ENST00000569245 CFAP58Q5T655 872 aa14.64□□□□□ -0.07
COMMD4-225ENST00000569245 SEL1L2Q5TEA6 688 aa14.64□□□□□ -0.07
COMMD4-225ENST00000569245 AFMIDQ63HM1 303 aa14.64□□□□□ -0.07
COMMD4-225ENST00000569245 KIAA1161Q6NSJ0 714 aa14.64□□□□□ -0.07
COMMD4-225ENST00000569245 NPWQ8N729 165 aa14.64□□□□□ -0.07
COMMD4-225ENST00000569245 PAF1Q8N7H5 531 aa14.64□□□□□ -0.07
COMMD4-225ENST00000569245 ACTRT1Q8TDG2 376 aa14.64□□□□□ -0.07
COMMD4-225ENST00000569245 RAPGEF5Q92565 580 aa14.64□□□□□ -0.07
COMMD4-225ENST00000569245 RAB7BQ96AH8 199 aa14.64□□□□□ -0.07
COMMD4-225ENST00000569245 KLHDC7BQ96G42 594 aa14.64□□□□□ -0.07
COMMD4-225ENST00000569245 CSPG4P5Q96PW8 444 aa14.64□□□□□ -0.07
COMMD4-225ENST00000569245 CINPQ9BW66 212 aaPredicted RBP14.64□□□□□ -0.07
COMMD4-225ENST00000569245 SLC17A9Q9BYT1 436 aa14.64□□□□□ -0.07
COMMD4-225ENST00000569245 FZD3Q9NPG1 666 aa14.64□□□□□ -0.07
COMMD4-225ENST00000569245 PCOLCE2Q9UKZ9 415 aa14.64□□□□□ -0.07
COMMD4-225ENST00000569245 ZFR2Q9UPR6 939 aaKnown RBP14.64□□□□□ -0.07
COMMD4-225ENST00000569245 MFHAS1Q9Y4C4 1052 aa14.64□□□□□ -0.07
COMMD4-225ENST00000569245 A0A1B0GTQ1 180 aa14.63□□□□□ -0.07
COMMD4-225ENST00000569245 C3orf70A6NLC5 250 aaPredicted RBP14.63□□□□□ -0.07
COMMD4-225ENST00000569245 ZNF487B1APH4 448 aa14.63□□□□□ -0.07
COMMD4-225ENST00000569245 INSIG1O15503 277 aa14.63□□□□□ -0.07
COMMD4-225ENST00000569245 TSPAN6O43657 245 aa14.63□□□□□ -0.07
COMMD4-225ENST00000569245 AP1G1O43747 822 aa14.63□□□□□ -0.07
COMMD4-225ENST00000569245 CEP104O60308 925 aa14.63□□□□□ -0.07
COMMD4-225ENST00000569245 PAK4O96013 591 aaPredicted RBP14.63□□□□□ -0.07
COMMD4-225ENST00000569245 KRT1P04264 644 aa14.63□□□□□ -0.07
COMMD4-225ENST00000569245 ITGAVP06756 1048 aa14.63□□□□□ -0.07
COMMD4-225ENST00000569245 HNRNPA2B1P22626 353 aaKnown RBP14.63□□□□□ -0.07
COMMD4-225ENST00000569245 KDELR1P24390 212 aa14.63□□□□□ -0.07
COMMD4-225ENST00000569245 CETN2P41208 172 aa14.63□□□□□ -0.07
COMMD4-225ENST00000569245 GRK6P43250 576 aa14.63□□□□□ -0.07
COMMD4-225ENST00000569245 CDH6P55285 790 aa14.63□□□□□ -0.07
COMMD4-225ENST00000569245 OVGP1Q12889 678 aa14.63□□□□□ -0.07
COMMD4-225ENST00000569245 ZNF211Q13398 564 aaPredicted RBP14.63□□□□□ -0.07
COMMD4-225ENST00000569245 PPP2R5EQ16537 467 aa14.63□□□□□ -0.07
COMMD4-225ENST00000569245 TAZQ16635 292 aa14.63□□□□□ -0.07
COMMD4-225ENST00000569245 ODF2Q5BJF6 829 aa14.63□□□□□ -0.07
COMMD4-225ENST00000569245 LRRC73Q5JTD7 316 aa14.63□□□□□ -0.07
COMMD4-225ENST00000569245 ARHGAP36Q6ZRI8 547 aa14.63□□□□□ -0.07
COMMD4-225ENST00000569245 IQCHQ86VS3 1027 aa14.63□□□□□ -0.07
COMMD4-225ENST00000569245 MAP7D3Q8IWC1 876 aa14.63□□□□□ -0.07
COMMD4-225ENST00000569245 ARHGAP12Q8IWW6 846 aa14.63□□□□□ -0.07
COMMD4-225ENST00000569245 KCTD6Q8NC69 237 aa14.63□□□□□ -0.07
COMMD4-225ENST00000569245 CDC6Q99741 560 aa14.63□□□□□ -0.07
COMMD4-225ENST00000569245 PDFQ9HBH1 243 aa14.63□□□□□ -0.07
COMMD4-225ENST00000569245 PCDH18Q9HCL0 1135 aa14.63□□□□□ -0.07
COMMD4-225ENST00000569245 LHX3Q9UBR4 397 aa14.63□□□□□ -0.07
COMMD4-225ENST00000569245 IPO11Q9UI26 975 aaKnown RBP14.63□□□□□ -0.07
COMMD4-225ENST00000569245 ITM2BQ9Y287 266 aa14.63□□□□□ -0.07
COMMD4-225ENST00000569245 EFR3BQ9Y2G0 817 aa14.63□□□□□ -0.07
COMMD4-225ENST00000569245 LRRD1A4D1F6 860 aa14.62□□□□□ -0.07
COMMD4-225ENST00000569245 IGLON5A6NGN9 336 aa14.62□□□□□ -0.07
COMMD4-225ENST00000569245 GOLGA8CPA6NN73 597 aa14.62□□□□□ -0.07
COMMD4-225ENST00000569245 PCDHGA12O60330 932 aa14.62□□□□□ -0.07
COMMD4-225ENST00000569245 PIGNO95427 931 aa14.62□□□□□ -0.07
COMMD4-225ENST00000569245 THEGLP0DJG4 465 aa14.62□□□□□ -0.07
COMMD4-225ENST00000569245 ABL2P42684 1182 aa14.62□□□□□ -0.07
COMMD4-225ENST00000569245 CLDN2P57739 230 aa14.62□□□□□ -0.07
COMMD4-225ENST00000569245 CKAP4Q07065 602 aaKnown RBP14.62□□□□□ -0.07
COMMD4-225ENST00000569245 IL10RBQ08334 325 aa14.62□□□□□ -0.07
COMMD4-225ENST00000569245 RFTN1Q14699 578 aaPredicted RBP14.62□□□□□ -0.07
COMMD4-225ENST00000569245 GRM3Q14832 879 aa14.62□□□□□ -0.07
COMMD4-225ENST00000569245 TMEM259Q4ZIN3 620 aa14.62□□□□□ -0.07
COMMD4-225ENST00000569245 MFSD7Q6UXD7 560 aa14.62□□□□□ -0.07
COMMD4-225ENST00000569245 SPOCD1Q6ZMY3 1216 aa14.62□□□□□ -0.07
COMMD4-225ENST00000569245 DBX2Q6ZNG2 339 aa14.62□□□□□ -0.07
COMMD4-225ENST00000569245 GATAD2AQ86YP4 633 aa14.62□□□□□ -0.07
COMMD4-225ENST00000569245 SLC13A5Q86YT5 568 aaPredicted RBP14.62□□□□□ -0.07
Retrieved 100 of 20,778 RNA–protein pairs in 25.3 ms