RNA–Protein interactions for RNA: ENST00000568877.5

COMMD4-224, Transcript of COMM domain containing 4, humanhuman

TSL 2

Gene COMMD4, Length 770 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COMMD4-224ENST00000568877 ACTN2P35609 894 aa16.88■□□□□ 0.29
COMMD4-224ENST00000568877 FNTAP49354 379 aa16.88■□□□□ 0.29
COMMD4-224ENST00000568877 POLR2LP62875 67 aaKnown RBP16.88■□□□□ 0.29
COMMD4-224ENST00000568877 SRSF5Q13243 272 aaKnown RBP16.88■□□□□ 0.29
COMMD4-224ENST00000568877 PRPSAP1Q14558 356 aa16.88■□□□□ 0.29
COMMD4-224ENST00000568877 UGP2Q16851 508 aa16.88■□□□□ 0.29
COMMD4-224ENST00000568877 SLC36A4Q6YBV0 504 aa16.88■□□□□ 0.29
COMMD4-224ENST00000568877 GLIS1Q8NBF1 620 aa16.88■□□□□ 0.29
COMMD4-224ENST00000568877 OR14C36Q8NHC7 312 aa16.88■□□□□ 0.29
COMMD4-224ENST00000568877 SPOCK2Q92563 424 aa16.88■□□□□ 0.29
COMMD4-224ENST00000568877 RAB7BQ96AH8 199 aa16.88■□□□□ 0.29
COMMD4-224ENST00000568877 OXNAD1Q96HP4 312 aaPredicted RBP16.88■□□□□ 0.29
COMMD4-224ENST00000568877 PPP1R2P1Q96PQ5 205 aa16.88■□□□□ 0.29
COMMD4-224ENST00000568877 PCDH9Q9HC56 1237 aa16.88■□□□□ 0.29
COMMD4-224ENST00000568877 VPS45Q9NRW7 570 aa16.88■□□□□ 0.29
COMMD4-224ENST00000568877 PAK5Q9P286 719 aa16.88■□□□□ 0.29
COMMD4-224ENST00000568877 FEZ2Q9UHY8 353 aaPredicted RBP16.88■□□□□ 0.29
COMMD4-224ENST00000568877 CHKBQ9Y259 395 aa16.88■□□□□ 0.29
COMMD4-224ENST00000568877 ZNF318Q5VUA4 2279 aa16.87■□□□□ 0.29
COMMD4-224ENST00000568877 UPK3BL1B0FP48 263 aa16.87■□□□□ 0.29
COMMD4-224ENST00000568877 UPK3BL2E5RIL1 263 aa16.87■□□□□ 0.29
COMMD4-224ENST00000568877 MAP3K13O43283 966 aa16.87■□□□□ 0.29
COMMD4-224ENST00000568877 PLRG1O43660 514 aaKnown RBP16.87■□□□□ 0.29
COMMD4-224ENST00000568877 LILRB5O75023 590 aa16.87■□□□□ 0.29
COMMD4-224ENST00000568877 PMPCBO75439 489 aa16.87■□□□□ 0.29
COMMD4-224ENST00000568877 ANXA9O76027 345 aa16.87■□□□□ 0.29
COMMD4-224ENST00000568877 METTL18O95568 372 aa16.87■□□□□ 0.29
COMMD4-224ENST00000568877 CPP00450 1065 aa16.87■□□□□ 0.29
COMMD4-224ENST00000568877 PRLP01236 227 aa16.87■□□□□ 0.29
COMMD4-224ENST00000568877 PDHA1P08559 390 aa16.87■□□□□ 0.29
COMMD4-224ENST00000568877 ZSCAN5DPP0CG00 497 aa16.87■□□□□ 0.29
COMMD4-224ENST00000568877 BCKDHBP21953 392 aa16.87■□□□□ 0.29
COMMD4-224ENST00000568877 XPAP23025 273 aaPredicted RBP16.87■□□□□ 0.29
COMMD4-224ENST00000568877 ABL2P42684 1182 aa16.87■□□□□ 0.29
COMMD4-224ENST00000568877 SUOXP51687 545 aa16.87■□□□□ 0.29
COMMD4-224ENST00000568877 ADPRHP54922 357 aa16.87■□□□□ 0.29
COMMD4-224ENST00000568877 GEMP55040 296 aa16.87■□□□□ 0.29
COMMD4-224ENST00000568877 TAS2R38P59533 333 aa16.87■□□□□ 0.29
COMMD4-224ENST00000568877 MPP3Q13368 585 aa16.87■□□□□ 0.29
COMMD4-224ENST00000568877 TUBB2AQ13885 445 aa16.87■□□□□ 0.29
COMMD4-224ENST00000568877 PCSK7Q16549 785 aa16.87■□□□□ 0.29
COMMD4-224ENST00000568877 KDELC1Q6UW63 502 aa16.87■□□□□ 0.29
COMMD4-224ENST00000568877 PRUNE1Q86TP1 453 aa16.87■□□□□ 0.29
COMMD4-224ENST00000568877 C11orf74Q86VG3 221 aa16.87■□□□□ 0.29
COMMD4-224ENST00000568877 GRK7Q8WTQ7 553 aa16.87■□□□□ 0.29
COMMD4-224ENST00000568877 GORASP1Q9BQQ3 440 aa16.87■□□□□ 0.29
COMMD4-224ENST00000568877 TUBB2BQ9BVA1 445 aa16.87■□□□□ 0.29
COMMD4-224ENST00000568877 DDX47Q9H0S4 455 aaKnown RBP16.87■□□□□ 0.29
COMMD4-224ENST00000568877 IRF2BPLQ9H1B7 796 aa16.87■□□□□ 0.29
COMMD4-224ENST00000568877 KDM4CQ9H3R0 1056 aa16.87■□□□□ 0.29
COMMD4-224ENST00000568877 PHTF1Q9UMS5 762 aa16.87■□□□□ 0.29
COMMD4-224ENST00000568877 AAR2Q9Y312 384 aaKnown RBP16.87■□□□□ 0.29
COMMD4-224ENST00000568877 ARIH1Q9Y4X5 557 aaPredicted RBP16.87■□□□□ 0.29
COMMD4-224ENST00000568877 LRRC72A6NJI9 287 aa16.86■□□□□ 0.29
COMMD4-224ENST00000568877 ESPNB1AK53 854 aa16.86■□□□□ 0.29
COMMD4-224ENST00000568877 AP1G1O43747 822 aa16.86■□□□□ 0.29
COMMD4-224ENST00000568877 ZNF500O60304 480 aaPredicted RBP16.86■□□□□ 0.29
COMMD4-224ENST00000568877 NDUFS2O75306 463 aa16.86■□□□□ 0.29
COMMD4-224ENST00000568877 SEMA4FO95754 770 aa16.86■□□□□ 0.29
COMMD4-224ENST00000568877 RPL22P35268 128 aaKnown RBP16.86■□□□□ 0.29
COMMD4-224ENST00000568877 PTPN5P54829 565 aa16.86■□□□□ 0.29
COMMD4-224ENST00000568877 WNT3AP56704 352 aa16.86■□□□□ 0.29
COMMD4-224ENST00000568877 RPL26P61254 145 aaKnown RBP16.86■□□□□ 0.29
COMMD4-224ENST00000568877 CDK18Q07002 472 aa16.86■□□□□ 0.29
COMMD4-224ENST00000568877 CKAP4Q07065 602 aaKnown RBP16.86■□□□□ 0.29
COMMD4-224ENST00000568877 LRRC73Q5JTD7 316 aa16.86■□□□□ 0.29
COMMD4-224ENST00000568877 ZC3H14Q6PJT7 736 aaKnown RBP16.86■□□□□ 0.29
COMMD4-224ENST00000568877 C4orf22Q6V702 233 aa16.86■□□□□ 0.29
COMMD4-224ENST00000568877 KLHL7Q8IXQ5 586 aa16.86■□□□□ 0.29
COMMD4-224ENST00000568877 SPATA4Q8NEY3 305 aa16.86■□□□□ 0.29
COMMD4-224ENST00000568877 PIH1D2Q8WWB5 315 aa16.86■□□□□ 0.29
COMMD4-224ENST00000568877 IFT43Q96FT9 208 aa16.86■□□□□ 0.29
COMMD4-224ENST00000568877 TRIB3Q96RU7 358 aa16.86■□□□□ 0.29
COMMD4-224ENST00000568877 MLPHQ9BV36 600 aaPredicted RBP16.86■□□□□ 0.29
COMMD4-224ENST00000568877 GPR174Q9BXC1 333 aa16.86■□□□□ 0.29
COMMD4-224ENST00000568877 ADGRE3Q9BY15 652 aa16.86■□□□□ 0.29
COMMD4-224ENST00000568877 PCYOX1Q9UHG3 505 aa16.86■□□□□ 0.29
COMMD4-224ENST00000568877 RPL26L1Q9UNX3 145 aaKnown RBP16.86■□□□□ 0.29
COMMD4-224ENST00000568877 FADS3Q9Y5Q0 445 aa16.86■□□□□ 0.29
COMMD4-224ENST00000568877 R4GN57 208 aa16.86■□□□□ 0.29
COMMD4-224ENST00000568877 GOLGA6CA6NDK9 693 aa16.85■□□□□ 0.29
COMMD4-224ENST00000568877 GOLGA6BA6NDN3 693 aa16.85■□□□□ 0.29
COMMD4-224ENST00000568877 FAM47DPA6NHR8 397 aa16.85■□□□□ 0.29
COMMD4-224ENST00000568877 AREL1O15033 823 aa16.85■□□□□ 0.29
COMMD4-224ENST00000568877 PRKCGP05129 697 aa16.85■□□□□ 0.29
COMMD4-224ENST00000568877 GOLGA6DP0CG33 693 aa16.85■□□□□ 0.29
COMMD4-224ENST00000568877 ITIH2P19823 946 aa16.85■□□□□ 0.29
COMMD4-224ENST00000568877 FDFT1P37268 417 aa16.85■□□□□ 0.29
COMMD4-224ENST00000568877 EPHB1P54762 984 aa16.85■□□□□ 0.29
COMMD4-224ENST00000568877 RPL6Q02878 288 aaKnown RBP16.85■□□□□ 0.29
COMMD4-224ENST00000568877 WHAMMP3Q1A5X7 153 aa16.85■□□□□ 0.29
COMMD4-224ENST00000568877 FAXCQ5TGI0 409 aa16.85■□□□□ 0.29
COMMD4-224ENST00000568877 ERAP2Q6P179 960 aa16.85■□□□□ 0.29
COMMD4-224ENST00000568877 CEP68Q76N32 757 aa16.85■□□□□ 0.29
COMMD4-224ENST00000568877 KDELC2Q7Z4H8 507 aa16.85■□□□□ 0.29
COMMD4-224ENST00000568877 KLHDC8BQ8IXV7 354 aa16.85■□□□□ 0.29
COMMD4-224ENST00000568877 NDUFAF2Q8N183 169 aa16.85■□□□□ 0.29
COMMD4-224ENST00000568877 TAB3Q8N5C8 712 aaPredicted RBP16.85■□□□□ 0.29
COMMD4-224ENST00000568877 LPCAT1Q8NF37 534 aa16.85■□□□□ 0.29
COMMD4-224ENST00000568877 IPMKQ8NFU5 416 aa16.85■□□□□ 0.29
Retrieved 100 of 20,778 RNA–protein pairs in 40.5 ms