RNA–Protein interactions for RNA: ENST00000568586.5

RAB40C-211, Transcript of RAB40C, member RAS oncogene family, humanhuman

TSL 2

Gene RAB40C, Length 648 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RAB40C-211ENST00000568586 CCNI2Q6ZMN8 369 aaPredicted RBP29.67■■■□□ 2.34
RAB40C-211ENST00000568586 TMPRSS7Q7RTY8 843 aa29.67■■■□□ 2.34
RAB40C-211ENST00000568586 EID2Q8N6I1 236 aa29.67■■■□□ 2.34
RAB40C-211ENST00000568586 CALN1Q9BXU9 219 aa29.67■■■□□ 2.34
RAB40C-211ENST00000568586 ATP13A3Q9H7F0 1226 aa29.67■■■□□ 2.34
RAB40C-211ENST00000568586 TMEM8BA6NDV4 472 aa29.66■■■□□ 2.34
RAB40C-211ENST00000568586 MMP20O60882 483 aa29.66■■■□□ 2.34
RAB40C-211ENST00000568586 TM7SF2O76062 418 aa29.66■■■□□ 2.34
RAB40C-211ENST00000568586 C1SP09871 688 aa29.66■■■□□ 2.34
RAB40C-211ENST00000568586 MAN1A1P33908 653 aa29.66■■■□□ 2.34
RAB40C-211ENST00000568586 SERPINB6P35237 376 aa29.66■■■□□ 2.34
RAB40C-211ENST00000568586 CDH6P55285 790 aa29.66■■■□□ 2.34
RAB40C-211ENST00000568586 SLC10A7Q0GE19 358 aa29.66■■■□□ 2.34
RAB40C-211ENST00000568586 FZD2Q14332 565 aa29.66■■■□□ 2.34
RAB40C-211ENST00000568586 ST3GAL2Q16842 350 aa29.66■■■□□ 2.34
RAB40C-211ENST00000568586 LRRC73Q5JTD7 316 aa29.66■■■□□ 2.34
RAB40C-211ENST00000568586 ZSWIM9Q86XI8 627 aa29.66■■■□□ 2.34
RAB40C-211ENST00000568586 LRRC49Q8IUZ0 686 aa29.66■■■□□ 2.34
RAB40C-211ENST00000568586 CNDP2Q96KP4 475 aaKnown RBP29.66■■■□□ 2.34
RAB40C-211ENST00000568586 DEF6Q9H4E7 631 aa29.66■■■□□ 2.34
RAB40C-211ENST00000568586 ZZEF1O43149 2961 aa29.66■■■□□ 2.34
RAB40C-211ENST00000568586 FREM2Q5SZK8 3169 aa29.66■■■□□ 2.34
RAB40C-211ENST00000568586 TRAFD1O14545 582 aaPredicted RBP29.65■■■□□ 2.34
RAB40C-211ENST00000568586 ENC1O14682 589 aa29.65■■■□□ 2.34
RAB40C-211ENST00000568586 RIOK3O14730 519 aaKnown RBP29.65■■■□□ 2.34
RAB40C-211ENST00000568586 AKR1B10O60218 316 aa29.65■■■□□ 2.34
RAB40C-211ENST00000568586 DGKAP23743 735 aa29.65■■■□□ 2.34
RAB40C-211ENST00000568586 SERPINA4P29622 427 aa29.65■■■□□ 2.34
RAB40C-211ENST00000568586 HSPA9P38646 679 aaKnown RBP29.65■■■□□ 2.34
RAB40C-211ENST00000568586 ADKP55263 362 aaKnown RBP29.65■■■□□ 2.34
RAB40C-211ENST00000568586 AP1S1P61966 158 aa29.65■■■□□ 2.34
RAB40C-211ENST00000568586 AGERQ15109 404 aa29.65■■■□□ 2.34
RAB40C-211ENST00000568586 PTAR1Q7Z6K3 402 aaPredicted RBP29.65■■■□□ 2.34
RAB40C-211ENST00000568586 CXorf40AQ8TE69 158 aa29.65■■■□□ 2.34
RAB40C-211ENST00000568586 NSMCE3Q96MG7 304 aa29.65■■■□□ 2.34
RAB40C-211ENST00000568586 NHEJ1Q9H9Q4 299 aaPredicted RBP29.65■■■□□ 2.34
RAB40C-211ENST00000568586 PCDH12Q9NPG4 1184 aa29.65■■■□□ 2.34
RAB40C-211ENST00000568586 CFAP69A5D8W1 941 aa29.64■■■□□ 2.34
RAB40C-211ENST00000568586 TOR1BO14657 336 aa29.64■■■□□ 2.34
RAB40C-211ENST00000568586 PIAS2O75928 621 aa29.64■■■□□ 2.34
RAB40C-211ENST00000568586 CD48P09326 243 aa29.64■■■□□ 2.34
RAB40C-211ENST00000568586 CDK4P11802 303 aa29.64■■■□□ 2.34
RAB40C-211ENST00000568586 CR2P20023 1033 aa29.64■■■□□ 2.34
RAB40C-211ENST00000568586 DPYSL3Q14195 570 aa29.64■■■□□ 2.34
RAB40C-211ENST00000568586 KRT81Q14533 505 aa29.64■■■□□ 2.34
RAB40C-211ENST00000568586 SMAD1Q15797 465 aaKnown RBP29.64■■■□□ 2.34
RAB40C-211ENST00000568586 CPNE8Q86YQ8 564 aa29.64■■■□□ 2.34
RAB40C-211ENST00000568586 CNGA4Q8IV77 575 aa29.64■■■□□ 2.34
RAB40C-211ENST00000568586 CCDC42Q96M95 316 aa29.64■■■□□ 2.34
RAB40C-211ENST00000568586 C1QTNF7Q9BXJ2 289 aa29.64■■■□□ 2.34
RAB40C-211ENST00000568586 DMXL2Q8TDJ6 3036 aa29.63■■■□□ 2.33
RAB40C-211ENST00000568586 MTA2O94776 668 aa29.63■■■□□ 2.33
RAB40C-211ENST00000568586 CSF2P04141 144 aa29.63■■■□□ 2.33
RAB40C-211ENST00000568586 GIMD1P0DJR0 217 aa29.63■■■□□ 2.33
RAB40C-211ENST00000568586 XPAP23025 273 aaPredicted RBP29.63■■■□□ 2.33
RAB40C-211ENST00000568586 MMP12P39900 470 aa29.63■■■□□ 2.33
RAB40C-211ENST00000568586 TAS2R40P59535 323 aa29.63■■■□□ 2.33
RAB40C-211ENST00000568586 YPEL5P62699 121 aa29.63■■■□□ 2.33
RAB40C-211ENST00000568586 MMRN1Q13201 1228 aa29.63■■■□□ 2.33
RAB40C-211ENST00000568586 ZNF211Q13398 564 aaPredicted RBP29.63■■■□□ 2.33
RAB40C-211ENST00000568586 PAFAH1B3Q15102 231 aaKnown RBP29.63■■■□□ 2.33
RAB40C-211ENST00000568586 PDK2Q15119 407 aa29.63■■■□□ 2.33
RAB40C-211ENST00000568586 PROX2Q3B8N5 592 aa29.63■■■□□ 2.33
RAB40C-211ENST00000568586 ATP13A4Q4VNC1 1196 aa29.63■■■□□ 2.33
RAB40C-211ENST00000568586 TP53I13Q8NBR0 393 aaPredicted RBP29.63■■■□□ 2.33
RAB40C-211ENST00000568586 FAF2Q96CS3 445 aa29.63■■■□□ 2.33
RAB40C-211ENST00000568586 ZNF670Q9BS34 389 aa29.63■■■□□ 2.33
RAB40C-211ENST00000568586 ATP8A1Q9Y2Q0 1164 aa29.63■■■□□ 2.33
RAB40C-211ENST00000568586 PTPRBP23467 1997 aa29.63■■■□□ 2.33
RAB40C-211ENST00000568586 SDC3O75056 442 aa29.62■■■□□ 2.33
RAB40C-211ENST00000568586 CAPNS1P04632 268 aa29.62■■■□□ 2.33
RAB40C-211ENST00000568586 KRT7P08729 469 aa29.62■■■□□ 2.33
RAB40C-211ENST00000568586 NME1P15531 152 aaKnown RBP29.62■■■□□ 2.33
RAB40C-211ENST00000568586 IGFALSP35858 605 aa29.62■■■□□ 2.33
RAB40C-211ENST00000568586 ACADVLP49748 655 aa29.62■■■□□ 2.33
RAB40C-211ENST00000568586 HNRNPKP61978 463 aaKnown RBP eCLIP29.62■■■□□ 2.33
RAB40C-211ENST00000568586 BCL2L1Q07817 233 aa29.62■■■□□ 2.33
RAB40C-211ENST00000568586 TCEAL1Q15170 157 aa29.62■■■□□ 2.33
RAB40C-211ENST00000568586 TPRG1LQ5T0D9 272 aa29.62■■■□□ 2.33
RAB40C-211ENST00000568586 ERAP2Q6P179 960 aa29.62■■■□□ 2.33
RAB40C-211ENST00000568586 PARGQ86W56 976 aa29.62■■■□□ 2.33
RAB40C-211ENST00000568586 ATPAF2Q8N5M1 289 aa29.62■■■□□ 2.33
RAB40C-211ENST00000568586 PCDH19Q8TAB3 1148 aa29.62■■■□□ 2.33
RAB40C-211ENST00000568586 MGME1Q9BQP7 344 aa29.62■■■□□ 2.33
RAB40C-211ENST00000568586 WRAP53Q9BUR4 548 aaKnown RBP29.62■■■□□ 2.33
RAB40C-211ENST00000568586 UCKL1Q9NWZ5 548 aa29.62■■■□□ 2.33
RAB40C-211ENST00000568586 LOC107983988A0A1B0GUW6 1196 aaPredicted RBP29.61■■■□□ 2.33
RAB40C-211ENST00000568586 TRIM38O00635 465 aa29.61■■■□□ 2.33
RAB40C-211ENST00000568586 HTRA2O43464 458 aaPredicted RBP29.61■■■□□ 2.33
RAB40C-211ENST00000568586 SSR1P43307 286 aaKnown RBP29.61■■■□□ 2.33
RAB40C-211ENST00000568586 SCNN1BP51168 640 aa29.61■■■□□ 2.33
RAB40C-211ENST00000568586 POLR2LP62875 67 aaKnown RBP29.61■■■□□ 2.33
RAB40C-211ENST00000568586 ILKQ13418 452 aa29.61■■■□□ 2.33
RAB40C-211ENST00000568586 RALGPS1Q5JS13 557 aa29.61■■■□□ 2.33
RAB40C-211ENST00000568586 CFAP58Q5T655 872 aa29.61■■■□□ 2.33
RAB40C-211ENST00000568586 GALNT15Q8N3T1 639 aa29.61■■■□□ 2.33
RAB40C-211ENST00000568586 PGBD5Q8N414 524 aa29.61■■■□□ 2.33
RAB40C-211ENST00000568586 TEX26Q8N6G2 289 aa29.61■■■□□ 2.33
RAB40C-211ENST00000568586 OR4C6Q8NH72 309 aa29.61■■■□□ 2.33
RAB40C-211ENST00000568586 SLC35G2Q8TBE7 412 aa29.61■■■□□ 2.33
Retrieved 100 of 20,778 RNA–protein pairs in 33.2 ms