RNA–Protein interactions for RNA: ENST00000568373.5

SMPD3-211, Transcript of sphingomyelin phosphodiesterase 3, humanhuman

TSL 1 (best) BASIC

Gene SMPD3, Length 2,073 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMPD3-211ENST00000568373 UBA2Q9UBT2 640 aaPredicted RBP18.27■□□□□ 0.51
SMPD3-211ENST00000568373 ACTL7AQ9Y615 435 aa18.27■□□□□ 0.51
SMPD3-211ENST00000568373 A0A087X1B8 175 aa18.26■□□□□ 0.51
SMPD3-211ENST00000568373 ZNF559-ZNF177A0A0A6YYI6 481 aaPredicted RBP18.26■□□□□ 0.51
SMPD3-211ENST00000568373 CHUKO15111 745 aa18.26■□□□□ 0.51
SMPD3-211ENST00000568373 RHOCP08134 193 aa18.26■□□□□ 0.51
SMPD3-211ENST00000568373 ESRRAP11474 423 aaPredicted RBP18.26■□□□□ 0.51
SMPD3-211ENST00000568373 LAG3P18627 525 aa18.26■□□□□ 0.51
SMPD3-211ENST00000568373 GLRBP48167 497 aa18.26■□□□□ 0.51
SMPD3-211ENST00000568373 ARSDP51689 593 aa18.26■□□□□ 0.51
SMPD3-211ENST00000568373 SLC12A2P55011 1212 aa18.26■□□□□ 0.51
SMPD3-211ENST00000568373 ZNF177Q13360 481 aaPredicted RBP18.26■□□□□ 0.51
SMPD3-211ENST00000568373 TUBB3Q13509 450 aa18.26■□□□□ 0.51
SMPD3-211ENST00000568373 LRRC8EQ6NSJ5 796 aa18.26■□□□□ 0.51
SMPD3-211ENST00000568373 MAVSQ7Z434 540 aa18.26■□□□□ 0.51
SMPD3-211ENST00000568373 SETD3Q86TU7 594 aaPredicted RBP18.26■□□□□ 0.51
SMPD3-211ENST00000568373 FSTL5Q8N475 847 aaPredicted RBP18.26■□□□□ 0.51
SMPD3-211ENST00000568373 PEX13Q92968 403 aa18.26■□□□□ 0.51
SMPD3-211ENST00000568373 HDAC10Q969S8 669 aa18.26■□□□□ 0.51
SMPD3-211ENST00000568373 GPR78Q96P69 363 aa18.26■□□□□ 0.51
SMPD3-211ENST00000568373 MIPEPQ99797 713 aa18.26■□□□□ 0.51
SMPD3-211ENST00000568373 OMDQ99983 421 aa18.26■□□□□ 0.51
SMPD3-211ENST00000568373 BTBD10Q9BSF8 475 aa18.26■□□□□ 0.51
SMPD3-211ENST00000568373 SPG21Q9NZD8 308 aa18.26■□□□□ 0.51
SMPD3-211ENST00000568373 TARM1B6A8C7 271 aa18.26■□□□□ 0.51
SMPD3-211ENST00000568373 KLHL2O95198 593 aa18.26■□□□□ 0.51
SMPD3-211ENST00000568373 HSPA4LO95757 839 aa18.26■□□□□ 0.51
SMPD3-211ENST00000568373 GLDCP23378 1020 aa18.26■□□□□ 0.51
SMPD3-211ENST00000568373 ELF1P32519 619 aa18.26■□□□□ 0.51
SMPD3-211ENST00000568373 CLCN5P51795 746 aa18.26■□□□□ 0.51
SMPD3-211ENST00000568373 MNAT1P51948 309 aa18.26■□□□□ 0.51
SMPD3-211ENST00000568373 PRKAA2P54646 552 aa18.26■□□□□ 0.51
SMPD3-211ENST00000568373 PRAMEP78395 509 aa18.26■□□□□ 0.51
SMPD3-211ENST00000568373 LAMB3Q13751 1172 aa18.26■□□□□ 0.51
SMPD3-211ENST00000568373 RFTN1Q14699 578 aaPredicted RBP18.26■□□□□ 0.51
SMPD3-211ENST00000568373 SLC14A2Q15849 920 aa18.26■□□□□ 0.51
SMPD3-211ENST00000568373 TSNAXIP1Q2TAA8 658 aa18.26■□□□□ 0.51
SMPD3-211ENST00000568373 ZNF789Q5FWF6 425 aa18.26■□□□□ 0.51
SMPD3-211ENST00000568373 RBM20Q5T481 1227 aaKnown RBP18.26■□□□□ 0.51
SMPD3-211ENST00000568373 LIPMQ5VYY2 423 aa18.26■□□□□ 0.51
SMPD3-211ENST00000568373 PTAR1Q7Z6K3 402 aaPredicted RBP18.26■□□□□ 0.51
SMPD3-211ENST00000568373 DNAJB7Q7Z6W7 309 aaPredicted RBP18.26■□□□□ 0.51
SMPD3-211ENST00000568373 DDX53Q86TM3 631 aaKnown RBP18.26■□□□□ 0.51
SMPD3-211ENST00000568373 OR6P1Q8NGX9 317 aa18.26■□□□□ 0.51
SMPD3-211ENST00000568373 WBP2Q969T9 261 aa18.26■□□□□ 0.51
SMPD3-211ENST00000568373 CINPQ9BW66 212 aaPredicted RBP18.26■□□□□ 0.51
SMPD3-211ENST00000568373 GATA5Q9BWX5 397 aaPredicted RBP18.26■□□□□ 0.51
SMPD3-211ENST00000568373 DNAJC28Q9NX36 388 aa18.26■□□□□ 0.51
SMPD3-211ENST00000568373 IGF2BP1Q9NZI8 577 aaKnown RBP eCLIP18.26■□□□□ 0.51
SMPD3-211ENST00000568373 TBC1D30Q9Y2I9 924 aa18.26■□□□□ 0.51
SMPD3-211ENST00000568373 ZNF195O14628 629 aa18.25■□□□□ 0.51
SMPD3-211ENST00000568373 ALDH18A1P54886 795 aaKnown RBP18.25■□□□□ 0.51
SMPD3-211ENST00000568373 ACVR1Q04771 509 aa18.25■□□□□ 0.51
SMPD3-211ENST00000568373 DLG1Q12959 904 aa18.25■□□□□ 0.51
SMPD3-211ENST00000568373 GALNT3Q14435 633 aa18.25■□□□□ 0.51
SMPD3-211ENST00000568373 TBCCQ15814 346 aa18.25■□□□□ 0.51
SMPD3-211ENST00000568373 TREML1Q86YW5 311 aa18.25■□□□□ 0.51
SMPD3-211ENST00000568373 LMNTD2Q8IXW0 634 aa18.25■□□□□ 0.51
SMPD3-211ENST00000568373 TCEAL8Q8IYN2 117 aa18.25■□□□□ 0.51
SMPD3-211ENST00000568373 CMTR2Q8IYT2 770 aaKnown RBP18.25■□□□□ 0.51
SMPD3-211ENST00000568373 BLOC1S5Q8TDH9 187 aa18.25■□□□□ 0.51
SMPD3-211ENST00000568373 AUTS2Q8WXX7 1259 aa18.25■□□□□ 0.51
SMPD3-211ENST00000568373 NXNL1Q96CM4 212 aa18.25■□□□□ 0.51
SMPD3-211ENST00000568373 TRIB3Q96RU7 358 aa18.25■□□□□ 0.51
SMPD3-211ENST00000568373 DDX50Q9BQ39 737 aaKnown RBP18.25■□□□□ 0.51
SMPD3-211ENST00000568373 CCDC106Q9BWC9 280 aa18.25■□□□□ 0.51
SMPD3-211ENST00000568373 CD248Q9HCU0 757 aa18.25■□□□□ 0.51
SMPD3-211ENST00000568373 XPR1Q9UBH6 696 aa18.25■□□□□ 0.51
SMPD3-211ENST00000568373 SORCS3Q9UPU3 1222 aa18.25■□□□□ 0.51
SMPD3-211ENST00000568373 APOBEC2Q9Y235 224 aaKnown RBP18.25■□□□□ 0.51
SMPD3-211ENST00000568373 KCTD3Q9Y597 815 aa18.25■□□□□ 0.51
SMPD3-211ENST00000568373 NDST3O95803 873 aa18.24■□□□□ 0.51
SMPD3-211ENST00000568373 IDH3AP50213 366 aa18.24■□□□□ 0.51
SMPD3-211ENST00000568373 TMEM150AQ86TG1 271 aa18.24■□□□□ 0.51
SMPD3-211ENST00000568373 ZNF781Q8N8C0 355 aa18.24■□□□□ 0.51
SMPD3-211ENST00000568373 BRSK1Q8TDC3 778 aa18.24■□□□□ 0.51
SMPD3-211ENST00000568373 NDNQ99608 321 aa18.24■□□□□ 0.51
SMPD3-211ENST00000568373 INSL5Q9Y5Q6 135 aa18.24■□□□□ 0.51
SMPD3-211ENST00000568373 CCL22O00626 93 aa18.24■□□□□ 0.51
SMPD3-211ENST00000568373 TSPAN3O60637 253 aa18.24■□□□□ 0.51
SMPD3-211ENST00000568373 EPHB3P54753 998 aa18.24■□□□□ 0.51
SMPD3-211ENST00000568373 HERC6Q8IVU3 1022 aa18.24■□□□□ 0.51
SMPD3-211ENST00000568373 FAM13CQ8NE31 585 aa18.24■□□□□ 0.51
SMPD3-211ENST00000568373 OLFM1Q99784 485 aa18.24■□□□□ 0.51
SMPD3-211ENST00000568373 CADM1Q9BY67 442 aaKnown RBP18.24■□□□□ 0.51
SMPD3-211ENST00000568373 DRC3Q9H069 523 aa18.24■□□□□ 0.51
SMPD3-211ENST00000568373 CDH19Q9H159 772 aa18.24■□□□□ 0.51
SMPD3-211ENST00000568373 SMPD4Q9NXE4 827 aa18.24■□□□□ 0.51
SMPD3-211ENST00000568373 STOML2Q9UJZ1 356 aa18.24■□□□□ 0.51
SMPD3-211ENST00000568373 ARL5AQ9Y689 179 aa18.24■□□□□ 0.51
SMPD3-211ENST00000568373 PLXNA4Q9HCM2 1894 aa18.23■□□□□ 0.51
SMPD3-211ENST00000568373 CARNS1A5YM72 827 aa18.23■□□□□ 0.51
SMPD3-211ENST00000568373 GYG2O15488 501 aa18.23■□□□□ 0.51
SMPD3-211ENST00000568373 WFS1O76024 890 aa18.23■□□□□ 0.51
SMPD3-211ENST00000568373 ENO1P06733 434 aaKnown RBP18.23■□□□□ 0.51
SMPD3-211ENST00000568373 MBL2P11226 248 aaPredicted RBP18.23■□□□□ 0.51
SMPD3-211ENST00000568373 CR2P20023 1033 aa18.23■□□□□ 0.51
SMPD3-211ENST00000568373 SLC8A1P32418 973 aa18.23■□□□□ 0.51
SMPD3-211ENST00000568373 RGRP47804 291 aa18.23■□□□□ 0.51
SMPD3-211ENST00000568373 GRIA4P48058 902 aa18.23■□□□□ 0.51
Retrieved 100 of 20,778 RNA–protein pairs in 45.8 ms