RNA–Protein interactions for RNA: ENST00000568219.5

PALB2-206, Transcript of partner and localizer of BRCA2, humanhuman

TSL 1 (best) BASIC

Gene PALB2, Length 3,963 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PALB2-206ENST00000568219 MILR1Q7Z6M3 343 aa10.98□□□□□ -0.65
PALB2-206ENST00000568219 SPATA22Q8NHS9 363 aa10.98□□□□□ -0.65
PALB2-206ENST00000568219 ITFG1Q8TB96 612 aa10.98□□□□□ -0.65
PALB2-206ENST00000568219 PPM1MQ96MI6 270 aa10.98□□□□□ -0.65
PALB2-206ENST00000568219 TEX13BQ9BXU2 312 aa10.98□□□□□ -0.65
PALB2-206ENST00000568219 ASPSCR1Q9BZE9 553 aa10.98□□□□□ -0.65
PALB2-206ENST00000568219 RIBC2Q9H4K1 309 aa10.98□□□□□ -0.65
PALB2-206ENST00000568219 SCN3BQ9NY72 215 aa10.98□□□□□ -0.65
PALB2-206ENST00000568219 TAF1P21675 1872 aa10.98□□□□□ -0.65
PALB2-206ENST00000568219 PABPN1LA6NDY0 278 aaKnown RBP10.98□□□□□ -0.65
PALB2-206ENST00000568219 TBX1O43435 398 aa10.98□□□□□ -0.65
PALB2-206ENST00000568219 ZNF37AP17032 561 aaPredicted RBP10.98□□□□□ -0.65
PALB2-206ENST00000568219 ERCC2P18074 760 aa10.98□□□□□ -0.65
PALB2-206ENST00000568219 ATP5F1P24539 256 aaPredicted RBP10.98□□□□□ -0.65
PALB2-206ENST00000568219 GPD2P43304 727 aa10.98□□□□□ -0.65
PALB2-206ENST00000568219 NOVP48745 357 aa10.98□□□□□ -0.65
PALB2-206ENST00000568219 HARS2P49590 506 aaKnown RBP10.98□□□□□ -0.65
PALB2-206ENST00000568219 CXCR3P49682 368 aa10.98□□□□□ -0.65
PALB2-206ENST00000568219 CLCN2P51788 898 aa10.98□□□□□ -0.65
PALB2-206ENST00000568219 NRG1Q02297 640 aaPredicted RBP10.98□□□□□ -0.65
PALB2-206ENST00000568219 EN1Q05925 392 aaPredicted RBP10.98□□□□□ -0.65
PALB2-206ENST00000568219 CDH17Q12864 832 aa10.98□□□□□ -0.65
PALB2-206ENST00000568219 DMC1Q14565 340 aa10.98□□□□□ -0.65
PALB2-206ENST00000568219 DGUOKQ16854 277 aa10.98□□□□□ -0.65
PALB2-206ENST00000568219 C15orf52Q6ZUT6 534 aaKnown RBP10.98□□□□□ -0.65
PALB2-206ENST00000568219 NIPA1Q7RTP0 329 aa10.98□□□□□ -0.65
PALB2-206ENST00000568219 OTOP3Q7RTS5 596 aa10.98□□□□□ -0.65
PALB2-206ENST00000568219 C1orf127Q8N9H9 656 aa10.98□□□□□ -0.65
PALB2-206ENST00000568219 KCTD15Q96SI1 283 aaPredicted RBP10.98□□□□□ -0.65
PALB2-206ENST00000568219 CEP44Q9C0F1 390 aa10.98□□□□□ -0.65
PALB2-206ENST00000568219 LHX5Q9H2C1 402 aa10.98□□□□□ -0.65
PALB2-206ENST00000568219 EPB41L1Q9H4G0 881 aa10.98□□□□□ -0.65
PALB2-206ENST00000568219 ALG2Q9H553 416 aa10.98□□□□□ -0.65
PALB2-206ENST00000568219 PNPLA8Q9NP80 782 aa10.98□□□□□ -0.65
PALB2-206ENST00000568219 TIMM22Q9Y584 194 aa10.98□□□□□ -0.65
PALB2-206ENST00000568219 SNX8Q9Y5X2 465 aa10.98□□□□□ -0.65
PALB2-206ENST00000568219 C10orf71Q711Q0 1435 aa10.98□□□□□ -0.65
PALB2-206ENST00000568219 LAMB4A4D0S4 1761 aa10.98□□□□□ -0.65
PALB2-206ENST00000568219 PDZK1P1A8MUH7 402 aa10.98□□□□□ -0.65
PALB2-206ENST00000568219 TFECO14948 347 aaPredicted RBP10.98□□□□□ -0.65
PALB2-206ENST00000568219 XYLBO75191 536 aa10.98□□□□□ -0.65
PALB2-206ENST00000568219 GCATO75600 419 aa10.98□□□□□ -0.65
PALB2-206ENST00000568219 FUCA1P04066 466 aa10.98□□□□□ -0.65
PALB2-206ENST00000568219 VARSP26640 1264 aaKnown RBP10.98□□□□□ -0.65
PALB2-206ENST00000568219 HSD17B4P51659 736 aa10.98□□□□□ -0.65
PALB2-206ENST00000568219 RAB10P61026 200 aa10.98□□□□□ -0.65
PALB2-206ENST00000568219 SIM2Q14190 667 aaPredicted RBP10.98□□□□□ -0.65
PALB2-206ENST00000568219 MOGQ16653 247 aa10.98□□□□□ -0.65
PALB2-206ENST00000568219 ZPBP2Q6X784 338 aa10.98□□□□□ -0.65
PALB2-206ENST00000568219 GALNT5Q7Z7M9 940 aa10.98□□□□□ -0.65
PALB2-206ENST00000568219 ATPAF2Q8N5M1 289 aa10.98□□□□□ -0.65
PALB2-206ENST00000568219 RSPH1Q8WYR4 309 aa10.98□□□□□ -0.65
PALB2-206ENST00000568219 CENPNQ96H22 339 aaPredicted RBP10.98□□□□□ -0.65
PALB2-206ENST00000568219 FAR2Q96K12 515 aa10.98□□□□□ -0.65
PALB2-206ENST00000568219 CHID1Q9BWS9 393 aa10.98□□□□□ -0.65
PALB2-206ENST00000568219 MAF1Q9H063 256 aa10.98□□□□□ -0.65
PALB2-206ENST00000568219 HMX2A2RU54 273 aa10.97□□□□□ -0.65
PALB2-206ENST00000568219 H3BMQ9 156 aa10.97□□□□□ -0.65
PALB2-206ENST00000568219 SH3BP5O60239 455 aa10.97□□□□□ -0.65
PALB2-206ENST00000568219 SYNCRIPO60506 623 aaKnown RBP10.97□□□□□ -0.65
PALB2-206ENST00000568219 TSC22D2O75157 780 aa10.97□□□□□ -0.65
PALB2-206ENST00000568219 FCGR1AP12314 374 aa10.97□□□□□ -0.65
PALB2-206ENST00000568219 TNFAIP2Q03169 654 aa10.97□□□□□ -0.65
PALB2-206ENST00000568219 FAM91A1Q658Y4 838 aa10.97□□□□□ -0.65
PALB2-206ENST00000568219 AKAP14Q86UN6 197 aa10.97□□□□□ -0.65
PALB2-206ENST00000568219 P3H2Q8IVL5 708 aa10.97□□□□□ -0.65
PALB2-206ENST00000568219 LPAR1Q92633 364 aa10.97□□□□□ -0.65
PALB2-206ENST00000568219 DMRTB1Q96MA1 342 aa10.97□□□□□ -0.65
PALB2-206ENST00000568219 COG8Q96MW5 612 aa10.97□□□□□ -0.65
PALB2-206ENST00000568219 DEPDC7Q96QD5 511 aa10.97□□□□□ -0.65
PALB2-206ENST00000568219 ZBTB18Q99592 522 aa10.97□□□□□ -0.65
PALB2-206ENST00000568219 ACO2Q99798 780 aaKnown RBP10.97□□□□□ -0.65
PALB2-206ENST00000568219 TUBA8Q9NY65 449 aaPredicted RBP10.97□□□□□ -0.65
PALB2-206ENST00000568219 IDH3BO43837 385 aa10.97□□□□□ -0.65
PALB2-206ENST00000568219 IL18RAPO95256 599 aa10.97□□□□□ -0.65
PALB2-206ENST00000568219 ASPAP45381 313 aa10.97□□□□□ -0.65
PALB2-206ENST00000568219 TAS2R39P59534 338 aa10.97□□□□□ -0.65
PALB2-206ENST00000568219 CD300CQ08708 224 aa10.97□□□□□ -0.65
PALB2-206ENST00000568219 TNFAIP1Q13829 316 aa10.97□□□□□ -0.65
PALB2-206ENST00000568219 NEPROQ6NW34 567 aa10.97□□□□□ -0.65
PALB2-206ENST00000568219 TP53INP2Q8IXH6 220 aa10.97□□□□□ -0.65
PALB2-206ENST00000568219 CLIP4Q8N3C7 705 aa10.97□□□□□ -0.65
PALB2-206ENST00000568219 FNDC5Q8NAU1 212 aa10.97□□□□□ -0.65
PALB2-206ENST00000568219 ANKRD52Q8NB46 1076 aa10.97□□□□□ -0.65
PALB2-206ENST00000568219 OSCP1Q8WVF1 389 aa10.97□□□□□ -0.65
PALB2-206ENST00000568219 MUS81Q96NY9 551 aa10.97□□□□□ -0.65
PALB2-206ENST00000568219 FCRL3Q96P31 734 aaPredicted RBP10.97□□□□□ -0.65
PALB2-206ENST00000568219 HAPLN2Q9GZV7 340 aa10.97□□□□□ -0.65
PALB2-206ENST00000568219 AS3MTQ9HBK9 375 aa10.97□□□□□ -0.65
PALB2-206ENST00000568219 CACNA2D2Q9NY47 1150 aa10.97□□□□□ -0.65
PALB2-206ENST00000568219 AKAP8LQ9ULX6 646 aaKnown RBP eCLIP10.97□□□□□ -0.65
PALB2-206ENST00000568219 NUP188Q5SRE5 1749 aa10.97□□□□□ -0.65
PALB2-206ENST00000568219 KANSL1LA0AUZ9 987 aa10.97□□□□□ -0.65
PALB2-206ENST00000568219 CCDC154A6NI56 674 aa10.97□□□□□ -0.65
PALB2-206ENST00000568219 PFDN6O15212 129 aa10.97□□□□□ -0.65
PALB2-206ENST00000568219 FAM189A1O60320 539 aa10.97□□□□□ -0.65
PALB2-206ENST00000568219 ZNF682O95780 498 aa10.97□□□□□ -0.65
PALB2-206ENST00000568219 MT-CYBP00156 380 aaPredicted RBP10.97□□□□□ -0.65
PALB2-206ENST00000568219 SLC13A2Q13183 592 aa10.97□□□□□ -0.65
PALB2-206ENST00000568219 FAM98BQ52LJ0 330 aaKnown RBP10.97□□□□□ -0.65
Retrieved 100 of 20,778 RNA–protein pairs in 20.9 ms