RNA–Protein interactions for RNA: ENST00000567817.5

CAPN3-217, Transcript of calpain 3, humanhuman

TSL 5

Gene CAPN3, Length 711 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CAPN3-217ENST00000567817 MMS22LQ6ZRQ5 1243 aa5.48□□□□□ -1.53
CAPN3-217ENST00000567817 MAEAQ7L5Y9 396 aa5.48□□□□□ -1.53
CAPN3-217ENST00000567817 PALB2Q86YC2 1186 aa5.48□□□□□ -1.53
CAPN3-217ENST00000567817 WDR49Q8IV35 697 aa5.48□□□□□ -1.53
CAPN3-217ENST00000567817 HERC6Q8IVU3 1022 aa5.48□□□□□ -1.53
CAPN3-217ENST00000567817 KATNAL2Q8IYT4 538 aa5.48□□□□□ -1.53
CAPN3-217ENST00000567817 MCOLN2Q8IZK6 566 aa5.48□□□□□ -1.53
CAPN3-217ENST00000567817 TTC39CQ8N584 583 aa5.48□□□□□ -1.53
CAPN3-217ENST00000567817 SH2D3CQ8N5H7 860 aa5.48□□□□□ -1.53
CAPN3-217ENST00000567817 REPS2Q8NFH8 660 aa5.48□□□□□ -1.53
CAPN3-217ENST00000567817 EXD1Q8NHP7 514 aa5.48□□□□□ -1.53
CAPN3-217ENST00000567817 DEPTORQ8TB45 409 aa5.48□□□□□ -1.53
CAPN3-217ENST00000567817 FBXO25Q8TCJ0 367 aa5.48□□□□□ -1.53
CAPN3-217ENST00000567817 TAS1R2Q8TE23 839 aa5.48□□□□□ -1.53
CAPN3-217ENST00000567817 ZNF483Q8TF39 744 aaPredicted RBP5.48□□□□□ -1.53
CAPN3-217ENST00000567817 SLC20A1Q8WUM9 679 aa5.48□□□□□ -1.53
CAPN3-217ENST00000567817 TCP11Q8WWU5 503 aa5.48□□□□□ -1.53
CAPN3-217ENST00000567817 PSPC1Q8WXF1 523 aaKnown RBP5.48□□□□□ -1.53
CAPN3-217ENST00000567817 KRT35Q92764 455 aa5.48□□□□□ -1.53
CAPN3-217ENST00000567817 ATOH1Q92858 354 aaPredicted RBP5.48□□□□□ -1.53
CAPN3-217ENST00000567817 PGBD4Q96DM1 585 aa5.48□□□□□ -1.53
CAPN3-217ENST00000567817 C18orf8Q96DM3 657 aa5.48□□□□□ -1.53
CAPN3-217ENST00000567817 CYFIP2Q96F07 1278 aa5.48□□□□□ -1.53
CAPN3-217ENST00000567817 TTC25Q96NG3 672 aa5.48□□□□□ -1.53
CAPN3-217ENST00000567817 PCDHB18PQ96TA0 734 aa5.48□□□□□ -1.53
CAPN3-217ENST00000567817 CGRRF1Q99675 332 aa5.48□□□□□ -1.53
CAPN3-217ENST00000567817 ACE2Q9BYF1 805 aaPredicted RBP5.48□□□□□ -1.53
CAPN3-217ENST00000567817 MIS12Q9H081 205 aa5.48□□□□□ -1.53
CAPN3-217ENST00000567817 POLR3FQ9H1D9 316 aaPredicted RBP5.48□□□□□ -1.53
CAPN3-217ENST00000567817 C2orf40Q9H1Z8 148 aa5.48□□□□□ -1.53
CAPN3-217ENST00000567817 NEUROG2Q9H2A3 272 aa5.48□□□□□ -1.53
CAPN3-217ENST00000567817 DPH5Q9H2P9 285 aa5.48□□□□□ -1.53
CAPN3-217ENST00000567817 CENPHQ9H3R5 247 aa5.48□□□□□ -1.53
CAPN3-217ENST00000567817 ABHD16BQ9H3Z7 469 aa5.48□□□□□ -1.53
CAPN3-217ENST00000567817 DHX33Q9H6R0 707 aaKnown RBP5.48□□□□□ -1.53
CAPN3-217ENST00000567817 ZNF302Q9NR11 478 aa5.48□□□□□ -1.53
CAPN3-217ENST00000567817 PARVAQ9NVD7 372 aa5.48□□□□□ -1.53
CAPN3-217ENST00000567817 SENP1Q9P0U3 644 aa5.48□□□□□ -1.53
CAPN3-217ENST00000567817 SCOCQ9UIL1 159 aa5.48□□□□□ -1.53
CAPN3-217ENST00000567817 ANAPC7Q9UJX3 599 aa5.48□□□□□ -1.53
CAPN3-217ENST00000567817 AGO2Q9UKV8 859 aaKnown RBP5.48□□□□□ -1.53
CAPN3-217ENST00000567817 WDR3Q9UNX4 943 aaKnown RBP eCLIP5.48□□□□□ -1.53
CAPN3-217ENST00000567817 SNX24Q9Y343 169 aa5.48□□□□□ -1.53
CAPN3-217ENST00000567817 HS3ST3A1Q9Y663 406 aa5.48□□□□□ -1.53
CAPN3-217ENST00000567817 GVINP1Q7Z2Y8 2422 aa5.48□□□□□ -1.53
CAPN3-217ENST00000567817 C5orf42Q9H799 3197 aa5.48□□□□□ -1.53
CAPN3-217ENST00000567817 COL11A1P12107 1806 aaPredicted RBP5.47□□□□□ -1.53
CAPN3-217ENST00000567817 IGKV6D-21A0A0A0MT36 114 aa5.47□□□□□ -1.53
CAPN3-217ENST00000567817 A0A1B0GUA9 196 aa5.47□□□□□ -1.53
CAPN3-217ENST00000567817 EPOPA6NHQ4 379 aa5.47□□□□□ -1.53
CAPN3-217ENST00000567817 ANKRD63C9JTQ0 380 aa5.47□□□□□ -1.53
CAPN3-217ENST00000567817 K7ERI5 159 aa5.47□□□□□ -1.53
CAPN3-217ENST00000567817 O00370 1275 aa5.47□□□□□ -1.53
CAPN3-217ENST00000567817 TRIM24O15164 1050 aa5.47□□□□□ -1.53
CAPN3-217ENST00000567817 ATP9AO75110 1047 aa5.47□□□□□ -1.53
CAPN3-217ENST00000567817 CDH16O75309 829 aa5.47□□□□□ -1.53
CAPN3-217ENST00000567817 TJP3O95049 919 aa5.47□□□□□ -1.53
CAPN3-217ENST00000567817 STBD1O95210 358 aa5.47□□□□□ -1.53
CAPN3-217ENST00000567817 CLTAP09496 248 aa5.47□□□□□ -1.53
CAPN3-217ENST00000567817 MYOGP15173 224 aa5.47□□□□□ -1.53
CAPN3-217ENST00000567817 ARL2P36404 184 aa5.47□□□□□ -1.53
CAPN3-217ENST00000567817 RPL21P46778 160 aaKnown RBP5.47□□□□□ -1.53
CAPN3-217ENST00000567817 SLC5A3P53794 718 aa5.47□□□□□ -1.53
CAPN3-217ENST00000567817 SRSF2Q01130 221 aaKnown RBP5.47□□□□□ -1.53
CAPN3-217ENST00000567817 ACTN3Q08043 901 aaPredicted RBP5.47□□□□□ -1.53
CAPN3-217ENST00000567817 PIGHQ14442 188 aaPredicted RBP5.47□□□□□ -1.53
CAPN3-217ENST00000567817 MXD4Q14582 209 aaPredicted RBP5.47□□□□□ -1.53
CAPN3-217ENST00000567817 TRADDQ15628 312 aa5.47□□□□□ -1.53
CAPN3-217ENST00000567817 UGCGQ16739 394 aa5.47□□□□□ -1.53
CAPN3-217ENST00000567817 KYAT1Q16773 422 aa5.47□□□□□ -1.53
CAPN3-217ENST00000567817 LACTB2Q53H82 288 aaPredicted RBP5.47□□□□□ -1.53
CAPN3-217ENST00000567817 PLA2G4FQ68DD2 849 aa5.47□□□□□ -1.53
CAPN3-217ENST00000567817 PLEKHA7Q6IQ23 1121 aa5.47□□□□□ -1.53
CAPN3-217ENST00000567817 SWSAP1Q6NVH7 229 aa5.47□□□□□ -1.53
CAPN3-217ENST00000567817 MON1BQ7L1V2 547 aa5.47□□□□□ -1.53
CAPN3-217ENST00000567817 GPRIN1Q7Z2K8 1008 aa5.47□□□□□ -1.53
CAPN3-217ENST00000567817 CPLX4Q7Z7G2 160 aa5.47□□□□□ -1.53
CAPN3-217ENST00000567817 PCGF5Q86SE9 256 aa5.47□□□□□ -1.53
CAPN3-217ENST00000567817 DDX42Q86XP3 938 aaKnown RBP eCLIP5.47□□□□□ -1.53
CAPN3-217ENST00000567817 ZBTB8OSQ8IWT0 167 aa5.47□□□□□ -1.53
CAPN3-217ENST00000567817 RCOR2Q8IZ40 523 aa5.47□□□□□ -1.53
CAPN3-217ENST00000567817 CCDC197Q8NCU1 140 aa5.47□□□□□ -1.53
CAPN3-217ENST00000567817 GPR156Q8NFN8 814 aa5.47□□□□□ -1.53
CAPN3-217ENST00000567817 MAGEC3Q8TD91 643 aa5.47□□□□□ -1.53
CAPN3-217ENST00000567817 SEMA4DQ92854 862 aa5.47□□□□□ -1.53
CAPN3-217ENST00000567817 GLG1Q92896 1179 aa5.47□□□□□ -1.53
CAPN3-217ENST00000567817 GRAMD1AQ96CP6 724 aa5.47□□□□□ -1.53
CAPN3-217ENST00000567817 PABPC5Q96DU9 382 aaKnown RBP5.47□□□□□ -1.53
CAPN3-217ENST00000567817 MRPL38Q96DV4 380 aaKnown RBP5.47□□□□□ -1.53
CAPN3-217ENST00000567817 SAAL1Q96ER3 474 aa5.47□□□□□ -1.53
CAPN3-217ENST00000567817 SCLT1Q96NL6 688 aa5.47□□□□□ -1.53
CAPN3-217ENST00000567817 SORCS2Q96PQ0 1159 aa5.47□□□□□ -1.53
CAPN3-217ENST00000567817 XPO6Q96QU8 1125 aaKnown RBP5.47□□□□□ -1.53
CAPN3-217ENST00000567817 TGS1Q96RS0 853 aaKnown RBP5.47□□□□□ -1.53
CAPN3-217ENST00000567817 FAM213AQ9BRX8 229 aa5.47□□□□□ -1.53
CAPN3-217ENST00000567817 TRIM51Q9BSJ1 452 aa5.47□□□□□ -1.53
CAPN3-217ENST00000567817 MENTQ9BUN1 341 aa5.47□□□□□ -1.53
CAPN3-217ENST00000567817 CPEB1Q9BZB8 566 aaKnown RBP5.47□□□□□ -1.53
CAPN3-217ENST00000567817 PCED1AQ9H1Q7 454 aa5.47□□□□□ -1.53
CAPN3-217ENST00000567817 UBN1Q9NPG3 1134 aa5.47□□□□□ -1.53
Retrieved 100 of 20,778 RNA–protein pairs in 22.6 ms