RNA–Protein interactions for RNA: ENST00000566669.1

UBFD1-206, Transcript of ubiquitin family domain containing 1, humanhuman

TSL 2

Gene UBFD1, Length 577 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBFD1-206ENST00000566669 ELOCQ15369 112 aa27.96■■■□□ 2.07
UBFD1-206ENST00000566669 PRRT3Q5FWE3 981 aa27.96■■■□□ 2.07
UBFD1-206ENST00000566669 LVRNQ6Q4G3 990 aa27.96■■■□□ 2.07
UBFD1-206ENST00000566669 PSTKQ8IV42 348 aaKnown RBP27.96■■■□□ 2.07
UBFD1-206ENST00000566669 SUV39H2Q9H5I1 410 aa27.96■■■□□ 2.07
UBFD1-206ENST00000566669 LRRC19Q9H756 370 aa27.96■■■□□ 2.07
UBFD1-206ENST00000566669 THSD1Q9NS62 852 aa27.96■■■□□ 2.07
UBFD1-206ENST00000566669 TDRD6O60522 2096 aaKnown RBP27.95■■■□□ 2.07
UBFD1-206ENST00000566669 CFAP69A5D8W1 941 aa27.95■■■□□ 2.06
UBFD1-206ENST00000566669 ALPIP09923 528 aa27.95■■■□□ 2.06
UBFD1-206ENST00000566669 EIF4A3P38919 411 aaKnown RBP27.95■■■□□ 2.06
UBFD1-206ENST00000566669 GABREP78334 506 aa27.95■■■□□ 2.06
UBFD1-206ENST00000566669 CDKN3Q16667 212 aa27.95■■■□□ 2.06
UBFD1-206ENST00000566669 UGP2Q16851 508 aa27.95■■■□□ 2.06
UBFD1-206ENST00000566669 ISXQ2M1V0 245 aa27.95■■■□□ 2.06
UBFD1-206ENST00000566669 KLHL40Q2TBA0 621 aa27.95■■■□□ 2.06
UBFD1-206ENST00000566669 DEFB133Q30KQ1 61 aa27.95■■■□□ 2.06
UBFD1-206ENST00000566669 C6orf132Q5T0Z8 1188 aa27.95■■■□□ 2.06
UBFD1-206ENST00000566669 FAXCQ5TGI0 409 aa27.95■■■□□ 2.06
UBFD1-206ENST00000566669 ESRP1Q6NXG1 681 aaKnown RBP27.95■■■□□ 2.06
UBFD1-206ENST00000566669 APTXQ7Z2E3 356 aaKnown RBP27.95■■■□□ 2.06
UBFD1-206ENST00000566669 EFL1Q7Z2Z2 1120 aaKnown RBP27.95■■■□□ 2.06
UBFD1-206ENST00000566669 TP53I13Q8NBR0 393 aaPredicted RBP27.95■■■□□ 2.06
UBFD1-206ENST00000566669 LGMNQ99538 433 aa27.95■■■□□ 2.06
UBFD1-206ENST00000566669 LHX3Q9UBR4 397 aa27.95■■■□□ 2.06
UBFD1-206ENST00000566669 PCDHB1Q9Y5F3 818 aa27.95■■■□□ 2.06
UBFD1-206ENST00000566669 ASXL3Q9C0F0 2248 aa27.95■■■□□ 2.06
UBFD1-206ENST00000566669 TEX51A0A1B0GUA7 166 aa27.94■■■□□ 2.06
UBFD1-206ENST00000566669 CPED1A4D0V7 1026 aa27.94■■■□□ 2.06
UBFD1-206ENST00000566669 PRAMEF11O60813 436 aa27.94■■■□□ 2.06
UBFD1-206ENST00000566669 RNF8O76064 485 aa27.94■■■□□ 2.06
UBFD1-206ENST00000566669 MLLT3P42568 568 aaPredicted RBP27.94■■■□□ 2.06
UBFD1-206ENST00000566669 CCDC183Q5T5S1 534 aa27.94■■■□□ 2.06
UBFD1-206ENST00000566669 BROXQ5VW32 411 aa27.94■■■□□ 2.06
UBFD1-206ENST00000566669 RBM44Q6ZP01 1051 aaKnown RBP27.94■■■□□ 2.06
UBFD1-206ENST00000566669 GPR155Q7Z3F1 870 aa27.94■■■□□ 2.06
UBFD1-206ENST00000566669 IRF2BP2Q7Z5L9 587 aa27.94■■■□□ 2.06
UBFD1-206ENST00000566669 FNIP1Q8TF40 1166 aa27.94■■■□□ 2.06
UBFD1-206ENST00000566669 FCRL3Q96P31 734 aaPredicted RBP27.94■■■□□ 2.06
UBFD1-206ENST00000566669 KLC2Q9H0B6 622 aa27.94■■■□□ 2.06
UBFD1-206ENST00000566669 PDFQ9HBH1 243 aa27.94■■■□□ 2.06
UBFD1-206ENST00000566669 AP4E1Q9UPM8 1137 aa27.94■■■□□ 2.06
UBFD1-206ENST00000566669 MAMLD1Q13495 774 aa27.93■■■□□ 2.06
UBFD1-206ENST00000566669 RFTN1Q14699 578 aaPredicted RBP27.93■■■□□ 2.06
UBFD1-206ENST00000566669 NCAPHQ15003 741 aa27.93■■■□□ 2.06
UBFD1-206ENST00000566669 CYTH1Q15438 398 aa27.93■■■□□ 2.06
UBFD1-206ENST00000566669 TPRG1LQ5T0D9 272 aa27.93■■■□□ 2.06
UBFD1-206ENST00000566669 ERMARDQ5T6L9 678 aa27.93■■■□□ 2.06
UBFD1-206ENST00000566669 PLEKHA7Q6IQ23 1121 aa27.93■■■□□ 2.06
UBFD1-206ENST00000566669 HIC2Q96JB3 615 aa27.93■■■□□ 2.06
UBFD1-206ENST00000566669 WRAP53Q9BUR4 548 aaKnown RBP27.93■■■□□ 2.06
UBFD1-206ENST00000566669 LRRC61Q9BV99 259 aa27.93■■■□□ 2.06
UBFD1-206ENST00000566669 ATP13A3Q9H7F0 1226 aa27.93■■■□□ 2.06
UBFD1-206ENST00000566669 DOLKQ9UPQ8 538 aa27.93■■■□□ 2.06
UBFD1-206ENST00000566669 BPTFQ12830 3046 aa27.93■■■□□ 2.06
UBFD1-206ENST00000566669 EEF2KO00418 725 aaKnown RBP27.92■■■□□ 2.06
UBFD1-206ENST00000566669 DAPK3O43293 454 aa27.92■■■□□ 2.06
UBFD1-206ENST00000566669 MPOP05164 745 aa27.92■■■□□ 2.06
UBFD1-206ENST00000566669 GZMAP12544 262 aa27.92■■■□□ 2.06
UBFD1-206ENST00000566669 ATP1A3P13637 1013 aa27.92■■■□□ 2.06
UBFD1-206ENST00000566669 PSMA2P25787 234 aa27.92■■■□□ 2.06
UBFD1-206ENST00000566669 SERPINA4P29622 427 aa27.92■■■□□ 2.06
UBFD1-206ENST00000566669 ADKP55263 362 aaKnown RBP27.92■■■□□ 2.06
UBFD1-206ENST00000566669 POLR2LP62875 67 aaKnown RBP27.92■■■□□ 2.06
UBFD1-206ENST00000566669 TLE3Q04726 772 aa27.92■■■□□ 2.06
UBFD1-206ENST00000566669 FILIP1LQ4L180 1135 aa27.92■■■□□ 2.06
UBFD1-206ENST00000566669 GUSBP11Q6P575 273 aa27.92■■■□□ 2.06
UBFD1-206ENST00000566669 SPACA3Q8IXA5 215 aa27.92■■■□□ 2.06
UBFD1-206ENST00000566669 OR6C4Q8NGE1 309 aa27.92■■■□□ 2.06
UBFD1-206ENST00000566669 CCDC97Q96F63 343 aaPredicted RBP27.92■■■□□ 2.06
UBFD1-206ENST00000566669 SYT11Q9BT88 431 aa27.92■■■□□ 2.06
UBFD1-206ENST00000566669 DPH1Q9BZG8 443 aa27.92■■■□□ 2.06
UBFD1-206ENST00000566669 ATXN7O15265 892 aaPredicted RBP27.91■■■□□ 2.06
UBFD1-206ENST00000566669 RASGRP1O95267 797 aa27.91■■■□□ 2.06
UBFD1-206ENST00000566669 HK3P52790 923 aa27.91■■■□□ 2.06
UBFD1-206ENST00000566669 NSUN2Q08J23 767 aaKnown RBP eCLIP27.91■■■□□ 2.06
UBFD1-206ENST00000566669 IRF4Q15306 451 aa27.91■■■□□ 2.06
UBFD1-206ENST00000566669 TMCO4Q5TGY1 634 aa27.91■■■□□ 2.06
UBFD1-206ENST00000566669 RBFAQ8N0V3 343 aa27.91■■■□□ 2.06
UBFD1-206ENST00000566669 LZTR1Q8N653 840 aa27.91■■■□□ 2.06
UBFD1-206ENST00000566669 TRIM11Q96F44 468 aa27.91■■■□□ 2.06
UBFD1-206ENST00000566669 CRELD1Q96HD1 420 aa27.91■■■□□ 2.06
UBFD1-206ENST00000566669 BBC3Q96PG8 261 aaPredicted RBP27.91■■■□□ 2.06
UBFD1-206ENST00000566669 BPIFA3Q9BQP9 254 aa27.91■■■□□ 2.06
UBFD1-206ENST00000566669 PCDH12Q9NPG4 1184 aa27.91■■■□□ 2.06
UBFD1-206ENST00000566669 MBNL1Q9NR56 388 aaKnown RBP27.91■■■□□ 2.06
UBFD1-206ENST00000566669 ATP8A1Q9Y2Q0 1164 aa27.91■■■□□ 2.06
UBFD1-206ENST00000566669 PCDHGA8Q9Y5G5 932 aa27.91■■■□□ 2.06
UBFD1-206ENST00000566669 PTPRQQ9UMZ3 2332 aa27.91■■■□□ 2.06
UBFD1-206ENST00000566669 SMTNL1A8MU46 457 aa27.9■■■□□ 2.06
UBFD1-206ENST00000566669 PRPSAP2O60256 369 aa27.9■■■□□ 2.06
UBFD1-206ENST00000566669 GCATO75600 419 aa27.9■■■□□ 2.06
UBFD1-206ENST00000566669 PALMO75781 387 aa27.9■■■□□ 2.06
UBFD1-206ENST00000566669 CTSEP14091 401 aa27.9■■■□□ 2.06
UBFD1-206ENST00000566669 TGM2P21980 687 aa27.9■■■□□ 2.06
UBFD1-206ENST00000566669 RBMS1P29558 406 aaKnown RBP27.9■■■□□ 2.06
UBFD1-206ENST00000566669 HCAR3P49019 387 aa27.9■■■□□ 2.06
UBFD1-206ENST00000566669 CCDC173Q0VFZ6 552 aa27.9■■■□□ 2.06
UBFD1-206ENST00000566669 NFATC4Q14934 902 aa27.9■■■□□ 2.06
UBFD1-206ENST00000566669 LRRC73Q5JTD7 316 aa27.9■■■□□ 2.06
Retrieved 100 of 20,778 RNA–protein pairs in 22.5 ms