RNA–Protein interactions for RNA: ENST00000565370.1

SPG7-211, Transcript of SPG7, paraplegin matrix AAA peptidase subunit, humanhuman

TSL 3

Gene SPG7, Length 686 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPG7-211ENST00000565370 TRAF3IP1Q8TDR0 691 aaPredicted RBP12.41□□□□□ -0.42
SPG7-211ENST00000565370 SAP25Q8TEE9 199 aa12.41□□□□□ -0.42
SPG7-211ENST00000565370 IFT43Q96FT9 208 aa12.41□□□□□ -0.42
SPG7-211ENST00000565370 LENG8Q96PV6 779 aaPredicted RBP12.41□□□□□ -0.42
SPG7-211ENST00000565370 C1QTNF2Q9BXJ5 285 aa12.41□□□□□ -0.42
SPG7-211ENST00000565370 SCUBE2Q9NQ36 999 aa12.41□□□□□ -0.42
SPG7-211ENST00000565370 ETNK2Q9NVF9 386 aa12.41□□□□□ -0.42
SPG7-211ENST00000565370 KLHL11Q9NVR0 708 aa12.41□□□□□ -0.42
SPG7-211ENST00000565370 BAHCC1Q9P281 2608 aa12.41□□□□□ -0.42
SPG7-211ENST00000565370 GGT7Q9UJ14 662 aa12.41□□□□□ -0.42
SPG7-211ENST00000565370 BTBD3Q9Y2F9 522 aa12.41□□□□□ -0.42
SPG7-211ENST00000565370 ATP8A1Q9Y2Q0 1164 aa12.41□□□□□ -0.42
SPG7-211ENST00000565370 NEUROG3Q9Y4Z2 214 aa12.41□□□□□ -0.42
SPG7-211ENST00000565370 HS3ST3A1Q9Y663 406 aa12.41□□□□□ -0.42
SPG7-211ENST00000565370 PCNX2A6NKB5 2137 aa12.41□□□□□ -0.42
SPG7-211ENST00000565370 LRRD1A4D1F6 860 aa12.4□□□□□ -0.42
SPG7-211ENST00000565370 GOLGA8CPA6NN73 597 aa12.4□□□□□ -0.42
SPG7-211ENST00000565370 TOR1BO14657 336 aa12.4□□□□□ -0.42
SPG7-211ENST00000565370 SPINT1O43278 529 aa12.4□□□□□ -0.42
SPG7-211ENST00000565370 HYAL3O43820 417 aaPredicted RBP12.4□□□□□ -0.42
SPG7-211ENST00000565370 MAFKO60675 156 aa12.4□□□□□ -0.42
SPG7-211ENST00000565370 MTA2O94776 668 aa12.4□□□□□ -0.42
SPG7-211ENST00000565370 LDOC1O95751 146 aaPredicted RBP12.4□□□□□ -0.42
SPG7-211ENST00000565370 PAK4O96013 591 aaPredicted RBP12.4□□□□□ -0.42
SPG7-211ENST00000565370 ALPPL2P10696 532 aa12.4□□□□□ -0.42
SPG7-211ENST00000565370 MMP12P39900 470 aa12.4□□□□□ -0.42
SPG7-211ENST00000565370 SLC1A1P43005 524 aa12.4□□□□□ -0.42
SPG7-211ENST00000565370 MMP13P45452 471 aa12.4□□□□□ -0.42
SPG7-211ENST00000565370 RGRP47804 291 aa12.4□□□□□ -0.42
SPG7-211ENST00000565370 THOP1P52888 689 aa12.4□□□□□ -0.42
SPG7-211ENST00000565370 HNRNPKP61978 463 aaKnown RBP eCLIP12.4□□□□□ -0.42
SPG7-211ENST00000565370 PTK2BQ14289 1009 aa12.4□□□□□ -0.42
SPG7-211ENST00000565370 SPA17Q15506 151 aa12.4□□□□□ -0.42
SPG7-211ENST00000565370 RALGPS1Q5JS13 557 aa12.4□□□□□ -0.42
SPG7-211ENST00000565370 MARC1Q5VT66 337 aa12.4□□□□□ -0.42
SPG7-211ENST00000565370 NCBP2-AS2Q69YL0 99 aa12.4□□□□□ -0.42
SPG7-211ENST00000565370 Q6ZSR6 202 aa12.4□□□□□ -0.42
SPG7-211ENST00000565370 CAMK1DQ8IU85 385 aa12.4□□□□□ -0.42
SPG7-211ENST00000565370 CCDC170Q8IYT3 715 aa12.4□□□□□ -0.42
SPG7-211ENST00000565370 ADAMTS14Q8WXS8 1223 aa12.4□□□□□ -0.42
SPG7-211ENST00000565370 MRFAP1L1Q96HT8 127 aa12.4□□□□□ -0.42
SPG7-211ENST00000565370 MGME1Q9BQP7 344 aa12.4□□□□□ -0.42
SPG7-211ENST00000565370 WRAP53Q9BUR4 548 aaKnown RBP12.4□□□□□ -0.42
SPG7-211ENST00000565370 SCNM1Q9BWG6 230 aa12.4□□□□□ -0.42
SPG7-211ENST00000565370 PCDH12Q9NPG4 1184 aa12.4□□□□□ -0.42
SPG7-211ENST00000565370 EVA1BQ9NVM1 165 aa12.4□□□□□ -0.42
SPG7-211ENST00000565370 SHROOM3Q8TF72 1996 aa12.39□□□□□ -0.43
SPG7-211ENST00000565370 DOCK9Q9BZ29 2069 aa12.39□□□□□ -0.43
SPG7-211ENST00000565370 ZNF487B1APH4 448 aa12.39□□□□□ -0.43
SPG7-211ENST00000565370 ENC1O14682 589 aa12.39□□□□□ -0.43
SPG7-211ENST00000565370 SPOPO43791 374 aa12.39□□□□□ -0.43
SPG7-211ENST00000565370 MMP20O60882 483 aa12.39□□□□□ -0.43
SPG7-211ENST00000565370 CPP00450 1065 aa12.39□□□□□ -0.43
SPG7-211ENST00000565370 KRT1P04264 644 aa12.39□□□□□ -0.43
SPG7-211ENST00000565370 CD48P09326 243 aa12.39□□□□□ -0.43
SPG7-211ENST00000565370 ELFN1P0C7U0 828 aa12.39□□□□□ -0.43
SPG7-211ENST00000565370 KRT10P13645 584 aa12.39□□□□□ -0.43
SPG7-211ENST00000565370 C6P13671 934 aa12.39□□□□□ -0.43
SPG7-211ENST00000565370 TIMP2P16035 220 aa12.39□□□□□ -0.43
SPG7-211ENST00000565370 CA4P22748 312 aa12.39□□□□□ -0.43
SPG7-211ENST00000565370 GARSP41250 739 aaKnown RBP12.39□□□□□ -0.43
SPG7-211ENST00000565370 ARSEP51690 589 aa12.39□□□□□ -0.43
SPG7-211ENST00000565370 ZNF75DP51815 510 aa12.39□□□□□ -0.43
SPG7-211ENST00000565370 TAS2R40P59535 323 aa12.39□□□□□ -0.43
SPG7-211ENST00000565370 SLC10A7Q0GE19 358 aa12.39□□□□□ -0.43
SPG7-211ENST00000565370 GALNT2Q10471 571 aa12.39□□□□□ -0.43
SPG7-211ENST00000565370 MMRN1Q13201 1228 aa12.39□□□□□ -0.43
SPG7-211ENST00000565370 PDE1CQ14123 709 aaPredicted RBP12.39□□□□□ -0.43
SPG7-211ENST00000565370 FGL2Q14314 439 aa12.39□□□□□ -0.43
SPG7-211ENST00000565370 PAFAH1B3Q15102 231 aaKnown RBP12.39□□□□□ -0.43
SPG7-211ENST00000565370 SHBQ15464 509 aa12.39□□□□□ -0.43
SPG7-211ENST00000565370 IFI16Q16666 785 aaKnown RBP12.39□□□□□ -0.43
SPG7-211ENST00000565370 TMEM52BQ4KMG9 183 aa12.39□□□□□ -0.43
SPG7-211ENST00000565370 ANKRD20A8PQ5CZ79 823 aa12.39□□□□□ -0.43
SPG7-211ENST00000565370 PRAMEF14Q5SWL7 426 aa12.39□□□□□ -0.43
SPG7-211ENST00000565370 LRRC38Q5VT99 294 aa12.39□□□□□ -0.43
SPG7-211ENST00000565370 RAB44Q7Z6P3 723 aaPredicted RBP12.39□□□□□ -0.43
SPG7-211ENST00000565370 VSIG1Q86XK7 387 aa12.39□□□□□ -0.43
SPG7-211ENST00000565370 TP53INP2Q8IXH6 220 aa12.39□□□□□ -0.43
SPG7-211ENST00000565370 SLC22A18ASQ8N1D0 253 aa12.39□□□□□ -0.43
SPG7-211ENST00000565370 EID2Q8N6I1 236 aa12.39□□□□□ -0.43
SPG7-211ENST00000565370 TC2NQ8N9U0 490 aa12.39□□□□□ -0.43
SPG7-211ENST00000565370 ECHDC3Q96DC8 303 aa12.39□□□□□ -0.43
SPG7-211ENST00000565370 CNDP2Q96KP4 475 aaKnown RBP12.39□□□□□ -0.43
SPG7-211ENST00000565370 NUDCD1Q96RS6 583 aa12.39□□□□□ -0.43
SPG7-211ENST00000565370 POLR1EQ9GZS1 481 aaKnown RBP12.39□□□□□ -0.43
SPG7-211ENST00000565370 DNAJC28Q9NX36 388 aa12.39□□□□□ -0.43
SPG7-211ENST00000565370 DDX56Q9NY93 547 aaKnown RBP12.39□□□□□ -0.43
SPG7-211ENST00000565370 SPTY2D1-AS1A0A0U1RR47 76 aa12.38□□□□□ -0.43
SPG7-211ENST00000565370 POM121BA6NF01 834 aa12.38□□□□□ -0.43
SPG7-211ENST00000565370 NEMP2A6NFY4 417 aa12.38□□□□□ -0.43
SPG7-211ENST00000565370 GOLGA6L6A8MZA4 724 aa12.38□□□□□ -0.43
SPG7-211ENST00000565370 RIOK3O14730 519 aaKnown RBP12.38□□□□□ -0.43
SPG7-211ENST00000565370 APOL1O14791 398 aa12.38□□□□□ -0.43
SPG7-211ENST00000565370 MUSKO15146 869 aa12.38□□□□□ -0.43
SPG7-211ENST00000565370 RAD51BO15315 384 aa12.38□□□□□ -0.43
SPG7-211ENST00000565370 LZTS3O60299 673 aaPredicted RBP12.38□□□□□ -0.43
SPG7-211ENST00000565370 SDC3O75056 442 aa12.38□□□□□ -0.43
SPG7-211ENST00000565370 PIAS2O75928 621 aa12.38□□□□□ -0.43
SPG7-211ENST00000565370 CDK4P11802 303 aa12.38□□□□□ -0.43
Retrieved 100 of 20,778 RNA–protein pairs in 52.8 ms