RNA–Protein interactions for RNA: ENST00000563683.5

RNF40-204, Transcript of ring finger protein 40, humanhuman

TSL 5 BASIC

Gene RNF40, Length 4,063 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNF40-204ENST00000563683 APOL5Q9BWW9 433 aa10.54□□□□□ -0.72
RNF40-204ENST00000563683 OSBPL6Q9BZF3 934 aa10.54□□□□□ -0.72
RNF40-204ENST00000563683 SMPD4Q9NXE4 827 aa10.54□□□□□ -0.72
RNF40-204ENST00000563683 ZNF232Q9UNY5 417 aa10.54□□□□□ -0.72
RNF40-204ENST00000563683 PSAT1Q9Y617 370 aa10.54□□□□□ -0.72
RNF40-204ENST00000563683 NRP1O14786 923 aa10.54□□□□□ -0.72
RNF40-204ENST00000563683 SORBS2O94875 1100 aaKnown RBP10.54□□□□□ -0.72
RNF40-204ENST00000563683 SNAI1O95863 264 aaPredicted RBP10.54□□□□□ -0.72
RNF40-204ENST00000563683 SERPINF2P08697 491 aa10.54□□□□□ -0.72
RNF40-204ENST00000563683 ZNF23P17027 643 aa10.54□□□□□ -0.72
RNF40-204ENST00000563683 PCSK6P29122 969 aa10.54□□□□□ -0.72
RNF40-204ENST00000563683 HMOX2P30519 316 aa10.54□□□□□ -0.72
RNF40-204ENST00000563683 SERPINH1P50454 418 aaKnown RBP10.54□□□□□ -0.72
RNF40-204ENST00000563683 MBLAC2Q68D91 279 aa10.54□□□□□ -0.72
RNF40-204ENST00000563683 SLC9A4Q6AI14 798 aa10.54□□□□□ -0.72
RNF40-204ENST00000563683 PTRHD1Q6GMV3 140 aaKnown RBP10.54□□□□□ -0.72
RNF40-204ENST00000563683 POTEHQ6S545 545 aa10.54□□□□□ -0.72
RNF40-204ENST00000563683 FRMD7Q6ZUT3 714 aa10.54□□□□□ -0.72
RNF40-204ENST00000563683 CRYBG2Q8N1P7 616 aa10.54□□□□□ -0.72
RNF40-204ENST00000563683 OR52K2Q8NGK3 314 aa10.54□□□□□ -0.72
RNF40-204ENST00000563683 CXorf38Q8TB03 319 aa10.54□□□□□ -0.72
RNF40-204ENST00000563683 DQX1Q8TE96 717 aaKnown RBP10.54□□□□□ -0.72
RNF40-204ENST00000563683 CNDP1Q96KN2 507 aa10.54□□□□□ -0.72
RNF40-204ENST00000563683 SYT17Q9BSW7 474 aa10.54□□□□□ -0.72
RNF40-204ENST00000563683 MRPL46Q9H2W6 279 aaKnown RBP10.54□□□□□ -0.72
RNF40-204ENST00000563683 RCOR3Q9P2K3 495 aaPredicted RBP10.54□□□□□ -0.72
RNF40-204ENST00000563683 ME2P23368 584 aa10.53□□□□□ -0.72
RNF40-204ENST00000563683 YWHAQP27348 245 aa10.53□□□□□ -0.72
RNF40-204ENST00000563683 WNT3AP56704 352 aa10.53□□□□□ -0.72
RNF40-204ENST00000563683 MPP1Q00013 466 aa10.53□□□□□ -0.72
RNF40-204ENST00000563683 PLOD1Q02809 727 aaPredicted RBP10.53□□□□□ -0.72
RNF40-204ENST00000563683 FASTKQ14296 549 aaKnown RBP10.53□□□□□ -0.72
RNF40-204ENST00000563683 VEPH1Q14D04 833 aa10.53□□□□□ -0.72
RNF40-204ENST00000563683 PDCD4Q53EL6 469 aaKnown RBP10.53□□□□□ -0.72
RNF40-204ENST00000563683 METTL21CQ5VZV1 264 aa10.53□□□□□ -0.72
RNF40-204ENST00000563683 CES4AQ5XG92 561 aa10.53□□□□□ -0.72
RNF40-204ENST00000563683 ESRP1Q6NXG1 681 aaKnown RBP10.53□□□□□ -0.72
RNF40-204ENST00000563683 Q6ZNX1 250 aa10.53□□□□□ -0.72
RNF40-204ENST00000563683 NCCRP1Q6ZVX7 275 aaPredicted RBP10.53□□□□□ -0.72
RNF40-204ENST00000563683 DENND6AQ8IWF6 608 aa10.53□□□□□ -0.72
RNF40-204ENST00000563683 NPLOC4Q8TAT6 608 aa10.53□□□□□ -0.72
RNF40-204ENST00000563683 RCN3Q96D15 328 aa10.53□□□□□ -0.72
RNF40-204ENST00000563683 EXOC2Q96KP1 924 aa10.53□□□□□ -0.72
RNF40-204ENST00000563683 SEMA6AQ9H2E6 1030 aa10.53□□□□□ -0.72
RNF40-204ENST00000563683 MARCH2Q9P0N8 246 aa10.53□□□□□ -0.72
RNF40-204ENST00000563683 ZNHIT2Q9UHR6 403 aa10.53□□□□□ -0.72
RNF40-204ENST00000563683 CNOT11Q9UKZ1 510 aaKnown RBP10.53□□□□□ -0.72
RNF40-204ENST00000563683 PCDHB7Q9Y5E2 793 aa10.53□□□□□ -0.72
RNF40-204ENST00000563683 PCDHB5Q9Y5E4 795 aa10.53□□□□□ -0.72
RNF40-204ENST00000563683 ZNF559-ZNF177A0A0A6YYI6 481 aaPredicted RBP10.53□□□□□ -0.72
RNF40-204ENST00000563683 PRRG1O14668 218 aa10.53□□□□□ -0.72
RNF40-204ENST00000563683 RAB10P61026 200 aa10.53□□□□□ -0.72
RNF40-204ENST00000563683 CREB5Q02930 508 aa10.53□□□□□ -0.72
RNF40-204ENST00000563683 ZNF177Q13360 481 aaPredicted RBP10.53□□□□□ -0.72
RNF40-204ENST00000563683 TAZQ16635 292 aa10.53□□□□□ -0.72
RNF40-204ENST00000563683 ARL13AQ5H913 290 aaPredicted RBP10.53□□□□□ -0.72
RNF40-204ENST00000563683 TMTC4Q5T4D3 741 aa10.53□□□□□ -0.72
RNF40-204ENST00000563683 TAPT1Q6NXT6 567 aa10.53□□□□□ -0.72
RNF40-204ENST00000563683 TAC4Q86UU9 113 aa10.53□□□□□ -0.72
RNF40-204ENST00000563683 OSTM1Q86WC4 334 aa10.53□□□□□ -0.72
RNF40-204ENST00000563683 NXNL1Q96CM4 212 aa10.53□□□□□ -0.72
RNF40-204ENST00000563683 GATA5Q9BWX5 397 aaPredicted RBP10.53□□□□□ -0.72
RNF40-204ENST00000563683 NFKBIZQ9BYH8 718 aa10.53□□□□□ -0.72
RNF40-204ENST00000563683 PRKD2Q9BZL6 878 aa10.53□□□□□ -0.72
RNF40-204ENST00000563683 WDR41Q9HAD4 459 aa10.53□□□□□ -0.72
RNF40-204ENST00000563683 MID1IP1Q9NPA3 183 aa10.53□□□□□ -0.72
RNF40-204ENST00000563683 PADI3Q9ULW8 664 aa10.53□□□□□ -0.72
RNF40-204ENST00000563683 PTCH2Q9Y6C5 1203 aa10.53□□□□□ -0.72
RNF40-204ENST00000563683 DPYSL4O14531 572 aa10.53□□□□□ -0.72
RNF40-204ENST00000563683 BAIAP3O94812 1187 aa10.53□□□□□ -0.72
RNF40-204ENST00000563683 ALDH2P05091 517 aa10.53□□□□□ -0.72
RNF40-204ENST00000563683 CYP3A5P20815 502 aa10.53□□□□□ -0.72
RNF40-204ENST00000563683 POU4F1Q01851 419 aa10.53□□□□□ -0.72
RNF40-204ENST00000563683 C6orf52Q5T4I8 152 aa10.53□□□□□ -0.72
RNF40-204ENST00000563683 AMIGO2Q86SJ2 522 aa10.53□□□□□ -0.72
RNF40-204ENST00000563683 CYGBQ8WWM9 190 aa10.53□□□□□ -0.72
RNF40-204ENST00000563683 HDAC10Q969S8 669 aa10.53□□□□□ -0.72
RNF40-204ENST00000563683 LENG8Q96PV6 779 aaPredicted RBP10.53□□□□□ -0.72
RNF40-204ENST00000563683 RBBP8Q99708 897 aa10.53□□□□□ -0.72
RNF40-204ENST00000563683 FBXO44Q9H4M3 255 aa10.53□□□□□ -0.72
RNF40-204ENST00000563683 COL5A3P25940 1745 aaPredicted RBP10.53□□□□□ -0.72
RNF40-204ENST00000563683 TCRBV5S1A1TA0A578 114 aa10.53□□□□□ -0.72
RNF40-204ENST00000563683 C2orf81A6NN90 581 aa10.53□□□□□ -0.72
RNF40-204ENST00000563683 H0Y626 953 aa10.53□□□□□ -0.72
RNF40-204ENST00000563683 MAGEB3O15480 346 aa10.53□□□□□ -0.72
RNF40-204ENST00000563683 TFEBP19484 476 aa10.53□□□□□ -0.72
RNF40-204ENST00000563683 PROZP22891 400 aa10.53□□□□□ -0.72
RNF40-204ENST00000563683 TKTP29401 623 aaKnown RBP10.53□□□□□ -0.72
RNF40-204ENST00000563683 SLC11A2P49281 568 aa10.53□□□□□ -0.72
RNF40-204ENST00000563683 INPP5AQ14642 412 aa10.53□□□□□ -0.72
RNF40-204ENST00000563683 LIPMQ5VYY2 423 aa10.53□□□□□ -0.72
RNF40-204ENST00000563683 DHRS4L2Q6PKH6 230 aa10.53□□□□□ -0.72
RNF40-204ENST00000563683 ANGPTL8Q6UXH0 198 aa10.53□□□□□ -0.72
RNF40-204ENST00000563683 DRC3Q9H069 523 aa10.53□□□□□ -0.72
RNF40-204ENST00000563683 CDH19Q9H159 772 aa10.53□□□□□ -0.72
RNF40-204ENST00000563683 RHOJQ9H4E5 214 aa10.53□□□□□ -0.72
RNF40-204ENST00000563683 PRDM16Q9HAZ2 1276 aa10.53□□□□□ -0.72
RNF40-204ENST00000563683 GLOD4Q9HC38 313 aa10.53□□□□□ -0.72
RNF40-204ENST00000563683 PRDM5Q9NQX1 630 aaPredicted RBP10.53□□□□□ -0.72
RNF40-204ENST00000563683 ADAM28Q9UKQ2 775 aa10.53□□□□□ -0.72
Retrieved 100 of 20,778 RNA–protein pairs in 47.5 ms