RNA–Protein interactions for RNA: ENST00000563623.5

ABCA3-203, Transcript of ATP binding cassette subfamily A member 3, humanhuman

TSL 1 (best)

Gene ABCA3, Length 3,649 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ABCA3-203ENST00000563623 PCDHGA7Q9Y5G6 932 aa11.91□□□□□ -0.5
ABCA3-203ENST00000563623 CEPT1Q9Y6K0 416 aa11.91□□□□□ -0.5
ABCA3-203ENST00000563623 MCM3APO60318 1980 aa11.91□□□□□ -0.5
ABCA3-203ENST00000563623 SHROOM3Q8TF72 1996 aa11.91□□□□□ -0.5
ABCA3-203ENST00000563623 ACOT8O14734 319 aa11.91□□□□□ -0.5
ABCA3-203ENST00000563623 NCAM2O15394 837 aa11.91□□□□□ -0.5
ABCA3-203ENST00000563623 SBK3P0C264 359 aa11.91□□□□□ -0.5
ABCA3-203ENST00000563623 CLCN2P51788 898 aa11.91□□□□□ -0.5
ABCA3-203ENST00000563623 PRKAA2P54646 552 aa11.91□□□□□ -0.5
ABCA3-203ENST00000563623 TPD52P55327 224 aaPredicted RBP11.91□□□□□ -0.5
ABCA3-203ENST00000563623 RHDQ02161 417 aa11.91□□□□□ -0.5
ABCA3-203ENST00000563623 ARHGAP1Q07960 439 aa11.91□□□□□ -0.5
ABCA3-203ENST00000563623 AGAP9Q5VTM2 703 aa11.91□□□□□ -0.5
ABCA3-203ENST00000563623 GPR107Q5VW38 600 aa11.91□□□□□ -0.5
ABCA3-203ENST00000563623 DPP9Q86TI2 863 aa11.91□□□□□ -0.5
ABCA3-203ENST00000563623 CRYBG2Q8N1P7 616 aa11.91□□□□□ -0.5
ABCA3-203ENST00000563623 PDZD8Q8NEN9 1154 aa11.91□□□□□ -0.5
ABCA3-203ENST00000563623 GAB3Q8WWW8 586 aa11.91□□□□□ -0.5
ABCA3-203ENST00000563623 MRPL57Q9BQC6 102 aaKnown RBP11.91□□□□□ -0.5
ABCA3-203ENST00000563623 C11orf84Q9BUA3 381 aaPredicted RBP11.91□□□□□ -0.5
ABCA3-203ENST00000563623 RHOBTB2Q9BYZ6 727 aa11.91□□□□□ -0.5
ABCA3-203ENST00000563623 CLK4Q9HAZ1 481 aaKnown RBP11.91□□□□□ -0.5
ABCA3-203ENST00000563623 PLK2Q9NYY3 685 aa11.91□□□□□ -0.5
ABCA3-203ENST00000563623 INPP4BO15327 924 aa11.9□□□□□ -0.5
ABCA3-203ENST00000563623 ZNF26P17031 533 aaPredicted RBP11.9□□□□□ -0.5
ABCA3-203ENST00000563623 KCNA5P22460 613 aa11.9□□□□□ -0.5
ABCA3-203ENST00000563623 SQLEQ14534 574 aa11.9□□□□□ -0.5
ABCA3-203ENST00000563623 POTEHQ6S545 545 aa11.9□□□□□ -0.5
ABCA3-203ENST00000563623 DEFB132Q7Z7B7 95 aa11.9□□□□□ -0.5
ABCA3-203ENST00000563623 PCYOX1LQ8NBM8 494 aa11.9□□□□□ -0.5
ABCA3-203ENST00000563623 FAM110BQ8TC76 370 aa11.9□□□□□ -0.5
ABCA3-203ENST00000563623 SPATA17Q96L03 361 aa11.9□□□□□ -0.5
ABCA3-203ENST00000563623 ZFP42Q96MM3 310 aa11.9□□□□□ -0.5
ABCA3-203ENST00000563623 SLC25A23Q9BV35 468 aa11.9□□□□□ -0.5
ABCA3-203ENST00000563623 CRYL1Q9Y2S2 319 aa11.9□□□□□ -0.5
ABCA3-203ENST00000563623 HTRA2O43464 458 aaPredicted RBP11.9□□□□□ -0.5
ABCA3-203ENST00000563623 C1QTNF8P60827 252 aa11.9□□□□□ -0.5
ABCA3-203ENST00000563623 PLIN5Q00G26 463 aa11.9□□□□□ -0.5
ABCA3-203ENST00000563623 SULT2A1Q06520 285 aa11.9□□□□□ -0.5
ABCA3-203ENST00000563623 SOX4Q06945 474 aaPredicted RBP11.9□□□□□ -0.5
ABCA3-203ENST00000563623 CLEC20AQ6ZU45 233 aa11.9□□□□□ -0.5
ABCA3-203ENST00000563623 CHSY3Q70JA7 882 aa11.9□□□□□ -0.5
ABCA3-203ENST00000563623 LRRC43Q8N309 656 aa11.9□□□□□ -0.5
ABCA3-203ENST00000563623 OR52K2Q8NGK3 314 aa11.9□□□□□ -0.5
ABCA3-203ENST00000563623 DNAJB3Q8WWF6 145 aa11.9□□□□□ -0.5
ABCA3-203ENST00000563623 RPL10LQ96L21 214 aaKnown RBP11.9□□□□□ -0.5
ABCA3-203ENST00000563623 SEPHS2Q99611 448 aa11.9□□□□□ -0.5
ABCA3-203ENST00000563623 COLEC11Q9BWP8 271 aa11.9□□□□□ -0.5
ABCA3-203ENST00000563623 NFKBIZQ9BYH8 718 aa11.9□□□□□ -0.5
ABCA3-203ENST00000563623 PFDN4Q9NQP4 134 aa11.9□□□□□ -0.5
ABCA3-203ENST00000563623 RBPJLQ9UBG7 517 aa11.9□□□□□ -0.5
ABCA3-203ENST00000563623 DOLKQ9UPQ8 538 aa11.9□□□□□ -0.5
ABCA3-203ENST00000563623 AAR2Q9Y312 384 aaKnown RBP11.9□□□□□ -0.5
ABCA3-203ENST00000563623 UTRNP46939 3433 aa11.9□□□□□ -0.51
ABCA3-203ENST00000563623 C11orf97A0A1B0GVM6 126 aaPredicted RBP11.9□□□□□ -0.51
ABCA3-203ENST00000563623 CLOCKO15516 846 aa11.9□□□□□ -0.51
ABCA3-203ENST00000563623 MAGEA12P43365 314 aa11.9□□□□□ -0.51
ABCA3-203ENST00000563623 HERC3Q15034 1050 aa11.9□□□□□ -0.51
ABCA3-203ENST00000563623 VPS26BQ4G0F5 336 aa11.9□□□□□ -0.51
ABCA3-203ENST00000563623 KLHL35Q6PF15 583 aa11.9□□□□□ -0.51
ABCA3-203ENST00000563623 SHCBP1Q8NEM2 672 aa11.9□□□□□ -0.51
ABCA3-203ENST00000563623 OR6J1Q8NGC5 347 aa11.9□□□□□ -0.51
ABCA3-203ENST00000563623 SPPL2BQ8TCT7 592 aa11.9□□□□□ -0.51
ABCA3-203ENST00000563623 TUBGCP3Q96CW5 907 aa11.9□□□□□ -0.51
ABCA3-203ENST00000563623 SLC45A3Q96JT2 553 aa11.9□□□□□ -0.51
ABCA3-203ENST00000563623 SPON1Q9HCB6 807 aa11.9□□□□□ -0.51
ABCA3-203ENST00000563623 EBF1Q9UH73 591 aa11.9□□□□□ -0.51
ABCA3-203ENST00000563623 TRAF6Q9Y4K3 522 aa11.9□□□□□ -0.51
ABCA3-203ENST00000563623 MGAMO43451 1857 aa11.89□□□□□ -0.51
ABCA3-203ENST00000563623 SOCS2O14508 198 aa11.89□□□□□ -0.51
ABCA3-203ENST00000563623 DYNC1LI2O43237 492 aaPredicted RBP11.89□□□□□ -0.51
ABCA3-203ENST00000563623 STAU1O95793 577 aaKnown RBP11.89□□□□□ -0.51
ABCA3-203ENST00000563623 GNAO1P09471 354 aa11.89□□□□□ -0.51
ABCA3-203ENST00000563623 ZNF23P17027 643 aa11.89□□□□□ -0.51
ABCA3-203ENST00000563623 IGFBP6P24592 240 aaPredicted RBP11.89□□□□□ -0.51
ABCA3-203ENST00000563623 INPP5AQ14642 412 aa11.89□□□□□ -0.51
ABCA3-203ENST00000563623 PLCL1Q15111 1095 aa11.89□□□□□ -0.51
ABCA3-203ENST00000563623 SH3D19Q5HYK7 790 aa11.89□□□□□ -0.51
ABCA3-203ENST00000563623 CHST15Q7LFX5 561 aaPredicted RBP11.89□□□□□ -0.51
ABCA3-203ENST00000563623 CPSF7Q8N684 471 aaKnown RBP11.89□□□□□ -0.51
ABCA3-203ENST00000563623 DCPSQ96C86 337 aaKnown RBP11.89□□□□□ -0.51
ABCA3-203ENST00000563623 ABHD8Q96I13 439 aa11.89□□□□□ -0.51
ABCA3-203ENST00000563623 SOX17Q9H6I2 414 aaPredicted RBP11.89□□□□□ -0.51
ABCA3-203ENST00000563623 GPRC5DQ9NZD1 345 aa11.89□□□□□ -0.51
ABCA3-203ENST00000563623 BTRCQ9Y297 605 aa11.89□□□□□ -0.51
ABCA3-203ENST00000563623 PTGDR2Q9Y5Y4 395 aa11.89□□□□□ -0.51
ABCA3-203ENST00000563623 ANXA9O76027 345 aa11.89□□□□□ -0.51
ABCA3-203ENST00000563623 ADSLP30566 484 aaPredicted RBP11.89□□□□□ -0.51
ABCA3-203ENST00000563623 HOXA11P31270 313 aaPredicted RBP11.89□□□□□ -0.51
ABCA3-203ENST00000563623 YAP1P46937 504 aaKnown RBP11.89□□□□□ -0.51
ABCA3-203ENST00000563623 PSMD7P51665 324 aa11.89□□□□□ -0.51
ABCA3-203ENST00000563623 LILRA4P59901 499 aa11.89□□□□□ -0.51
ABCA3-203ENST00000563623 MAXP61244 160 aa11.89□□□□□ -0.51
ABCA3-203ENST00000563623 PRKCQQ04759 706 aa11.89□□□□□ -0.51
ABCA3-203ENST00000563623 DMPKQ09013 629 aa11.89□□□□□ -0.51
ABCA3-203ENST00000563623 ZNF789Q5FWF6 425 aa11.89□□□□□ -0.51
ABCA3-203ENST00000563623 OTUD3Q5T2D3 398 aaPredicted RBP11.89□□□□□ -0.51
ABCA3-203ENST00000563623 OTUD1Q5VV17 481 aaPredicted RBP11.89□□□□□ -0.51
ABCA3-203ENST00000563623 ZBTB8BQ8NAP8 495 aaPredicted RBP11.89□□□□□ -0.51
ABCA3-203ENST00000563623 DNAJB14Q8TBM8 379 aa11.89□□□□□ -0.51
Retrieved 100 of 20,778 RNA–protein pairs in 30.9 ms