RNA–Protein interactions for RNA: ENST00000563498.1

NME3-204, Transcript of NME/NM23 nucleoside diphosphate kinase 3, humanhuman

TSL 2 BASIC

Gene NME3, Length 920 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NME3-204ENST00000563498 RXFP2Q8WXD0 754 aa18.88■□□□□ 0.61
NME3-204ENST00000563498 CENPIQ92674 756 aaPredicted RBP18.88■□□□□ 0.61
NME3-204ENST00000563498 NTAN1Q96AB6 310 aa18.88■□□□□ 0.61
NME3-204ENST00000563498 GFM1Q96RP9 751 aaKnown RBP18.88■□□□□ 0.61
NME3-204ENST00000563498 STK33Q9BYT3 514 aa18.88■□□□□ 0.61
NME3-204ENST00000563498 CPEB1Q9BZB8 566 aaKnown RBP18.88■□□□□ 0.61
NME3-204ENST00000563498 EDEM3Q9BZQ6 932 aa18.88■□□□□ 0.61
NME3-204ENST00000563498 STRADBQ9C0K7 418 aa18.88■□□□□ 0.61
NME3-204ENST00000563498 SYNDIG1Q9H7V2 258 aa18.88■□□□□ 0.61
NME3-204ENST00000563498 GULP1Q9UBP9 304 aa18.88■□□□□ 0.61
NME3-204ENST00000563498 SLC28A2O43868 658 aa18.87■□□□□ 0.61
NME3-204ENST00000563498 RASGRP1O95267 797 aa18.87■□□□□ 0.61
NME3-204ENST00000563498 CELA2BP08218 269 aaPredicted RBP18.87■□□□□ 0.61
NME3-204ENST00000563498 CTSEP14091 401 aa18.87■□□□□ 0.61
NME3-204ENST00000563498 TIMP2P16035 220 aa18.87■□□□□ 0.61
NME3-204ENST00000563498 HTR1BP28222 390 aa18.87■□□□□ 0.61
NME3-204ENST00000563498 SLC5A2P31639 672 aa18.87■□□□□ 0.61
NME3-204ENST00000563498 CCKBRP32239 447 aa18.87■□□□□ 0.61
NME3-204ENST00000563498 UGT1A5P35504 534 aa18.87■□□□□ 0.61
NME3-204ENST00000563498 KCNC4Q03721 635 aa18.87■□□□□ 0.61
NME3-204ENST00000563498 ELP6Q0PNE2 266 aa18.87■□□□□ 0.61
NME3-204ENST00000563498 LRRC14Q15048 493 aa18.87■□□□□ 0.61
NME3-204ENST00000563498 B3GNT8Q7Z7M8 397 aa18.87■□□□□ 0.61
NME3-204ENST00000563498 GKN2Q86XP6 184 aa18.87■□□□□ 0.61
NME3-204ENST00000563498 CCDC74AQ96AQ1 378 aa18.87■□□□□ 0.61
NME3-204ENST00000563498 WRAP53Q9BUR4 548 aaKnown RBP18.87■□□□□ 0.61
NME3-204ENST00000563498 PIEZO2Q9H5I5 2752 aa18.87■□□□□ 0.61
NME3-204ENST00000563498 EPB41L5Q9HCM4 733 aa18.87■□□□□ 0.61
NME3-204ENST00000563498 RABGEF1Q9UJ41 708 aa18.87■□□□□ 0.61
NME3-204ENST00000563498 NOCTQ9UK39 431 aaKnown RBP18.87■□□□□ 0.61
NME3-204ENST00000563498 EFSO43281 561 aa18.86■□□□□ 0.61
NME3-204ENST00000563498 CYP1A1P04798 512 aaPredicted RBP18.86■□□□□ 0.61
NME3-204ENST00000563498 ITIH2P19823 946 aa18.86■□□□□ 0.61
NME3-204ENST00000563498 INHBCP55103 352 aa18.86■□□□□ 0.61
NME3-204ENST00000563498 HDAC4P56524 1084 aa18.86■□□□□ 0.61
NME3-204ENST00000563498 RHOAP61586 193 aa18.86■□□□□ 0.61
NME3-204ENST00000563498 CDR2Q01850 454 aa18.86■□□□□ 0.61
NME3-204ENST00000563498 NFATC4Q14934 902 aa18.86■□□□□ 0.61
NME3-204ENST00000563498 AGERQ15109 404 aa18.86■□□□□ 0.61
NME3-204ENST00000563498 ALG11Q2TAA5 492 aa18.86■□□□□ 0.61
NME3-204ENST00000563498 WSCD2Q2TBF2 565 aa18.86■□□□□ 0.61
NME3-204ENST00000563498 HID1Q8IV36 788 aa18.86■□□□□ 0.61
NME3-204ENST00000563498 CCDC185Q8N715 623 aa18.86■□□□□ 0.61
NME3-204ENST00000563498 RTL3Q8N8U3 475 aaKnown RBP18.86■□□□□ 0.61
NME3-204ENST00000563498 ATL2Q8NHH9 583 aa18.86■□□□□ 0.61
NME3-204ENST00000563498 GPT2Q8TD30 523 aa18.86■□□□□ 0.61
NME3-204ENST00000563498 TMEM74Q96NL1 305 aa18.86■□□□□ 0.61
NME3-204ENST00000563498 NOL6Q9H6R4 1146 aaKnown RBP18.86■□□□□ 0.61
NME3-204ENST00000563498 SIRPGQ9P1W8 387 aa18.86■□□□□ 0.61
NME3-204ENST00000563498 MAST4O15021 2626 aa18.85■□□□□ 0.61
NME3-204ENST00000563498 A0A1W2PQM1 296 aa18.85■□□□□ 0.61
NME3-204ENST00000563498 TSPAN11A1L157 253 aa18.85■□□□□ 0.61
NME3-204ENST00000563498 NOBOXO60393 691 aa18.85■□□□□ 0.61
NME3-204ENST00000563498 WISP1O95388 367 aa18.85■□□□□ 0.61
NME3-204ENST00000563498 GJB6O95452 261 aa18.85■□□□□ 0.61
NME3-204ENST00000563498 ITGB2P05107 769 aa18.85■□□□□ 0.61
NME3-204ENST00000563498 RPLP0P05388 317 aaKnown RBP18.85■□□□□ 0.61
NME3-204ENST00000563498 XPAP23025 273 aaPredicted RBP18.85■□□□□ 0.61
NME3-204ENST00000563498 ERCC5P28715 1186 aaPredicted RBP18.85■□□□□ 0.61
NME3-204ENST00000563498 YBEYP58557 167 aaPredicted RBP18.85■□□□□ 0.61
NME3-204ENST00000563498 GRM3Q14832 879 aa18.85■□□□□ 0.61
NME3-204ENST00000563498 JOSD2Q8TAC2 188 aa18.85■□□□□ 0.61
NME3-204ENST00000563498 FAM172AQ8WUF8 416 aa18.85■□□□□ 0.61
NME3-204ENST00000563498 TSACCQ96A04 125 aaPredicted RBP18.85■□□□□ 0.61
NME3-204ENST00000563498 MAGEB5Q9BZ81 275 aa18.85■□□□□ 0.61
NME3-204ENST00000563498 LRRN3Q9H3W5 708 aa18.85■□□□□ 0.61
NME3-204ENST00000563498 GPR34Q9UPC5 381 aa18.85■□□□□ 0.61
NME3-204ENST00000563498 NVLO15381 856 aaKnown RBP18.84■□□□□ 0.61
NME3-204ENST00000563498 GSCP56915 257 aaPredicted RBP18.84■□□□□ 0.61
NME3-204ENST00000563498 SRP54P61011 504 aaKnown RBP18.84■□□□□ 0.61
NME3-204ENST00000563498 UBE2HP62256 183 aa18.84■□□□□ 0.61
NME3-204ENST00000563498 CCL7P80098 99 aa18.84■□□□□ 0.61
NME3-204ENST00000563498 INPP5AQ14642 412 aa18.84■□□□□ 0.61
NME3-204ENST00000563498 UGP2Q16851 508 aa18.84■□□□□ 0.61
NME3-204ENST00000563498 ENPP7Q6UWV6 458 aa18.84■□□□□ 0.61
NME3-204ENST00000563498 ZNF354CQ86Y25 554 aa18.84■□□□□ 0.61
NME3-204ENST00000563498 EXD3Q8N9H8 876 aa18.84■□□□□ 0.61
NME3-204ENST00000563498 GPR156Q8NFN8 814 aa18.84■□□□□ 0.61
NME3-204ENST00000563498 SLC20A1Q8WUM9 679 aa18.84■□□□□ 0.61
NME3-204ENST00000563498 TMEM159Q96B96 161 aa18.84■□□□□ 0.61
NME3-204ENST00000563498 SGF29Q96ES7 293 aa18.84■□□□□ 0.61
NME3-204ENST00000563498 RBM15Q96T37 977 aaKnown RBP eCLIP18.84■□□□□ 0.61
NME3-204ENST00000563498 APOOQ9BUR5 198 aa18.84■□□□□ 0.61
NME3-204ENST00000563498 FOXP3Q9BZS1 431 aa18.84■□□□□ 0.61
NME3-204ENST00000563498 APPL1Q9UKG1 709 aa18.84■□□□□ 0.61
NME3-204ENST00000563498 DGKBQ9Y6T7 804 aa18.84■□□□□ 0.61
NME3-204ENST00000563498 LRP4O75096 1905 aa18.84■□□□□ 0.61
NME3-204ENST00000563498 LIPCP11150 499 aa18.83■□□□□ 0.6
NME3-204ENST00000563498 KRT3P12035 628 aa18.83■□□□□ 0.6
NME3-204ENST00000563498 PNLIPP16233 465 aa18.83■□□□□ 0.6
NME3-204ENST00000563498 EPHB2P29323 1055 aa18.83■□□□□ 0.6
NME3-204ENST00000563498 FMO1Q01740 532 aa18.83■□□□□ 0.6
NME3-204ENST00000563498 SERINC3Q13530 473 aa18.83■□□□□ 0.6
NME3-204ENST00000563498 PARP15Q460N3 678 aa18.83■□□□□ 0.6
NME3-204ENST00000563498 TRIM72Q6ZMU5 477 aa18.83■□□□□ 0.6
NME3-204ENST00000563498 USP53Q70EK8 1073 aa18.83■□□□□ 0.6
NME3-204ENST00000563498 SLFN11Q7Z7L1 901 aa18.83■□□□□ 0.6
NME3-204ENST00000563498 DNAAF5Q86Y56 855 aa18.83■□□□□ 0.6
NME3-204ENST00000563498 JAMLQ86YT9 394 aa18.83■□□□□ 0.6
NME3-204ENST00000563498 HMCESQ96FZ2 354 aa18.83■□□□□ 0.6
Retrieved 100 of 20,778 RNA–protein pairs in 26.3 ms