RNA–Protein interactions for RNA: ENST00000563367.1

NME3-203, Transcript of NME/NM23 nucleoside diphosphate kinase 3, humanhuman

TSL 3

Gene NME3, Length 891 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NME3-203ENST00000563367 ERVMER34-1Q9H9K5 563 aa28.55■■■□□ 2.16
NME3-203ENST00000563367 PCDH12Q9NPG4 1184 aa28.55■■■□□ 2.16
NME3-203ENST00000563367 REXO2Q9Y3B8 237 aaKnown RBP28.55■■■□□ 2.16
NME3-203ENST00000563367 ARID1BQ8NFD5 2236 aaPredicted RBP28.54■■■□□ 2.16
NME3-203ENST00000563367 RCCD1A6NED2 376 aa28.54■■■□□ 2.16
NME3-203ENST00000563367 POM121BA6NF01 834 aa28.54■■■□□ 2.16
NME3-203ENST00000563367 MAGEC1O60732 1142 aa28.54■■■□□ 2.16
NME3-203ENST00000563367 PRKCGP05129 697 aa28.54■■■□□ 2.16
NME3-203ENST00000563367 XPAP23025 273 aaPredicted RBP28.54■■■□□ 2.16
NME3-203ENST00000563367 HSPA9P38646 679 aaKnown RBP28.54■■■□□ 2.16
NME3-203ENST00000563367 MMP13P45452 471 aa28.54■■■□□ 2.16
NME3-203ENST00000563367 SUOXP51687 545 aa28.54■■■□□ 2.16
NME3-203ENST00000563367 MAXP61244 160 aa28.54■■■□□ 2.16
NME3-203ENST00000563367 AP1S1P61966 158 aa28.54■■■□□ 2.16
NME3-203ENST00000563367 BCL2L1Q07817 233 aa28.54■■■□□ 2.16
NME3-203ENST00000563367 SUZ12Q15022 739 aaKnown RBP28.54■■■□□ 2.16
NME3-203ENST00000563367 TMEM52BQ4KMG9 183 aa28.54■■■□□ 2.16
NME3-203ENST00000563367 CFAP58Q5T655 872 aa28.54■■■□□ 2.16
NME3-203ENST00000563367 MARC1Q5VT66 337 aa28.54■■■□□ 2.16
NME3-203ENST00000563367 BRAT1Q6PJG6 821 aa28.54■■■□□ 2.16
NME3-203ENST00000563367 RHOT1Q8IXI2 618 aa28.54■■■□□ 2.16
NME3-203ENST00000563367 TEX26Q8N6G2 289 aa28.54■■■□□ 2.16
NME3-203ENST00000563367 NSMCE1Q8WV22 266 aa28.54■■■□□ 2.16
NME3-203ENST00000563367 ASB12Q8WXK4 309 aa28.54■■■□□ 2.16
NME3-203ENST00000563367 LENG8Q96PV6 779 aaPredicted RBP28.54■■■□□ 2.16
NME3-203ENST00000563367 SALL4Q9UJQ4 1053 aa28.54■■■□□ 2.16
NME3-203ENST00000563367 HS3ST3A1Q9Y663 406 aa28.54■■■□□ 2.16
NME3-203ENST00000563367 ALG6Q9Y672 507 aa28.54■■■□□ 2.16
NME3-203ENST00000563367 A0A0A6YYK5 440 aaPredicted RBP28.53■■■□□ 2.16
NME3-203ENST00000563367 TRAFD1O14545 582 aaPredicted RBP28.53■■■□□ 2.16
NME3-203ENST00000563367 FLRT2O43155 660 aa28.53■■■□□ 2.16
NME3-203ENST00000563367 SPOPO43791 374 aa28.53■■■□□ 2.16
NME3-203ENST00000563367 KRT1P04264 644 aa28.53■■■□□ 2.16
NME3-203ENST00000563367 CDC25BP30305 580 aa28.53■■■□□ 2.16
NME3-203ENST00000563367 SIM1P81133 766 aaPredicted RBP28.53■■■□□ 2.16
NME3-203ENST00000563367 SEMG2Q02383 582 aa28.53■■■□□ 2.16
NME3-203ENST00000563367 TRIP6Q15654 476 aaKnown RBP28.53■■■□□ 2.16
NME3-203ENST00000563367 GATAD2AQ86YP4 633 aa28.53■■■□□ 2.16
NME3-203ENST00000563367 PLD5Q8N7P1 536 aa28.53■■■□□ 2.16
NME3-203ENST00000563367 SPC24Q8NBT2 197 aa28.53■■■□□ 2.16
NME3-203ENST00000563367 CXorf40AQ8TE69 158 aa28.53■■■□□ 2.16
NME3-203ENST00000563367 RNF25Q96BH1 459 aaPredicted RBP28.53■■■□□ 2.16
NME3-203ENST00000563367 NUDCD1Q96RS6 583 aa28.53■■■□□ 2.16
NME3-203ENST00000563367 NOD2Q9HC29 1040 aa28.53■■■□□ 2.16
NME3-203ENST00000563367 DTLQ9NZJ0 730 aa28.53■■■□□ 2.16
NME3-203ENST00000563367 ZNF487B1APH4 448 aa28.52■■■□□ 2.16
NME3-203ENST00000563367 RIOK3O14730 519 aaKnown RBP28.52■■■□□ 2.16
NME3-203ENST00000563367 PMLP29590 882 aa28.52■■■□□ 2.16
NME3-203ENST00000563367 RXRGP48443 463 aa28.52■■■□□ 2.16
NME3-203ENST00000563367 ELP6Q0PNE2 266 aa28.52■■■□□ 2.16
NME3-203ENST00000563367 HNRNPDQ14103 355 aaKnown RBP28.52■■■□□ 2.16
NME3-203ENST00000563367 IFI16Q16666 785 aaKnown RBP28.52■■■□□ 2.16
NME3-203ENST00000563367 KDM7AQ6ZMT4 941 aa28.52■■■□□ 2.16
NME3-203ENST00000563367 Q6ZSR6 202 aa28.52■■■□□ 2.16
NME3-203ENST00000563367 TMEM139Q8IV31 216 aa28.52■■■□□ 2.16
NME3-203ENST00000563367 SLC22A18ASQ8N1D0 253 aa28.52■■■□□ 2.16
NME3-203ENST00000563367 BBS5Q8N3I7 341 aa28.52■■■□□ 2.16
NME3-203ENST00000563367 BAHD1Q8TBE0 780 aaPredicted RBP28.52■■■□□ 2.16
NME3-203ENST00000563367 RHBDD1Q8TEB9 315 aa28.52■■■□□ 2.16
NME3-203ENST00000563367 TSGA13Q96PP4 275 aa28.52■■■□□ 2.16
NME3-203ENST00000563367 NT5MQ9NPB1 228 aa28.52■■■□□ 2.16
NME3-203ENST00000563367 LUC7LQ9NQ29 371 aaKnown RBP28.52■■■□□ 2.16
NME3-203ENST00000563367 SCUBE2Q9NQ36 999 aa28.52■■■□□ 2.16
NME3-203ENST00000563367 PCDHB9Q9Y5E1 797 aa28.52■■■□□ 2.16
NME3-203ENST00000563367 PCDHGC4Q9Y5F7 938 aa28.52■■■□□ 2.16
NME3-203ENST00000563367 TM7SF2O76062 418 aa28.51■■■□□ 2.15
NME3-203ENST00000563367 BNIP3Q12983 259 aa28.51■■■□□ 2.15
NME3-203ENST00000563367 SLC9A4Q6AI14 798 aa28.51■■■□□ 2.15
NME3-203ENST00000563367 VSIG1Q86XK7 387 aa28.51■■■□□ 2.15
NME3-203ENST00000563367 SAP25Q8TEE9 199 aa28.51■■■□□ 2.15
NME3-203ENST00000563367 MAML1Q92585 1016 aa28.51■■■□□ 2.15
NME3-203ENST00000563367 CENPTQ96BT3 561 aa28.51■■■□□ 2.15
NME3-203ENST00000563367 CAAP1Q9H8G2 361 aa28.51■■■□□ 2.15
NME3-203ENST00000563367 DDX56Q9NY93 547 aaKnown RBP28.51■■■□□ 2.15
NME3-203ENST00000563367 ATP8A1Q9Y2Q0 1164 aa28.51■■■□□ 2.15
NME3-203ENST00000563367 COQ6Q9Y2Z9 468 aa28.51■■■□□ 2.15
NME3-203ENST00000563367 LOC107983988A0A1B0GUW6 1196 aaPredicted RBP28.5■■■□□ 2.15
NME3-203ENST00000563367 A6NNZ2 444 aa28.5■■■□□ 2.15
NME3-203ENST00000563367 MATN3O15232 486 aa28.5■■■□□ 2.15
NME3-203ENST00000563367 CCNCP24863 283 aa28.5■■■□□ 2.15
NME3-203ENST00000563367 MMP12P39900 470 aa28.5■■■□□ 2.15
NME3-203ENST00000563367 ARRB1P49407 418 aaPredicted RBP28.5■■■□□ 2.15
NME3-203ENST00000563367 TIGD7Q6NT04 549 aaPredicted RBP28.5■■■□□ 2.15
NME3-203ENST00000563367 MFSD7Q6UXD7 560 aa28.5■■■□□ 2.15
NME3-203ENST00000563367 KYAT3Q6YP21 454 aaKnown RBP28.5■■■□□ 2.15
NME3-203ENST00000563367 PTAR1Q7Z6K3 402 aaPredicted RBP28.5■■■□□ 2.15
NME3-203ENST00000563367 OXR1Q8N573 874 aa28.5■■■□□ 2.15
NME3-203ENST00000563367 ACRBPQ8NEB7 543 aa28.5■■■□□ 2.15
NME3-203ENST00000563367 FATE1Q969F0 183 aa28.5■■■□□ 2.15
NME3-203ENST00000563367 BAG1Q99933 345 aaPredicted RBP28.5■■■□□ 2.15
NME3-203ENST00000563367 GPR27Q9NS67 375 aa28.5■■■□□ 2.15
NME3-203ENST00000563367 IMPACTQ9P2X3 320 aa28.5■■■□□ 2.15
NME3-203ENST00000563367 DUSP10Q9Y6W6 482 aa28.5■■■□□ 2.15
NME3-203ENST00000563367 FPGTO14772 594 aa28.49■■■□□ 2.15
NME3-203ENST00000563367 HTRA2O43464 458 aaPredicted RBP28.49■■■□□ 2.15
NME3-203ENST00000563367 EPHA8P29322 1005 aaPredicted RBP28.49■■■□□ 2.15
NME3-203ENST00000563367 GRK6P43250 576 aa28.49■■■□□ 2.15
NME3-203ENST00000563367 ERAP2Q6P179 960 aa28.49■■■□□ 2.15
NME3-203ENST00000563367 DENND6BQ8NEG7 585 aa28.49■■■□□ 2.15
NME3-203ENST00000563367 TPCN2Q8NHX9 752 aa28.49■■■□□ 2.15
Retrieved 100 of 20,778 RNA–protein pairs in 25.1 ms