RNA–Protein interactions for RNA: ENST00000563239.1

UBR1-204, Transcript of ubiquitin protein ligase E3 component n-recognin 1, humanhuman

TSL 3

Gene UBR1, Length 545 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBR1-204ENST00000563239 KCNK1O00180 336 aa8.62□□□□□ -1.03
UBR1-204ENST00000563239 RAD51BO15315 384 aa8.62□□□□□ -1.03
UBR1-204ENST00000563239 TSPAN6O43657 245 aa8.62□□□□□ -1.03
UBR1-204ENST00000563239 FZD6O60353 706 aa8.62□□□□□ -1.03
UBR1-204ENST00000563239 PCDH8O95206 1070 aa8.62□□□□□ -1.03
UBR1-204ENST00000563239 JCHAINP01591 159 aa8.62□□□□□ -1.03
UBR1-204ENST00000563239 PRKCGP05129 697 aa8.62□□□□□ -1.03
UBR1-204ENST00000563239 HLA-DQB2P05538 268 aa8.62□□□□□ -1.03
UBR1-204ENST00000563239 MMP2P08253 660 aa8.62□□□□□ -1.03
UBR1-204ENST00000563239 CCNB1P14635 433 aa8.62□□□□□ -1.03
UBR1-204ENST00000563239 GNSP15586 552 aa8.62□□□□□ -1.03
UBR1-204ENST00000563239 PRLRP16471 622 aa8.62□□□□□ -1.03
UBR1-204ENST00000563239 HSPA9P38646 679 aaKnown RBP8.62□□□□□ -1.03
UBR1-204ENST00000563239 NR2C2P49116 596 aa8.62□□□□□ -1.03
UBR1-204ENST00000563239 AFF3P51826 1226 aaKnown RBP8.62□□□□□ -1.03
UBR1-204ENST00000563239 RWDD2BP57060 319 aa8.62□□□□□ -1.03
UBR1-204ENST00000563239 COPS2P61201 443 aa8.62□□□□□ -1.03
UBR1-204ENST00000563239 RACK1P63244 317 aaKnown RBP8.62□□□□□ -1.03
UBR1-204ENST00000563239 IFI35P80217 286 aaPredicted RBP8.62□□□□□ -1.03
UBR1-204ENST00000563239 ARHGAP8P85298 464 aa8.62□□□□□ -1.03
UBR1-204ENST00000563239 SEMG2Q02383 582 aa8.62□□□□□ -1.03
UBR1-204ENST00000563239 BCL2L1Q07817 233 aa8.62□□□□□ -1.03
UBR1-204ENST00000563239 CCDC15Q0P6D6 951 aa8.62□□□□□ -1.03
UBR1-204ENST00000563239 TRAF2Q12933 501 aa8.62□□□□□ -1.03
UBR1-204ENST00000563239 GRIK2Q13002 908 aa8.62□□□□□ -1.03
UBR1-204ENST00000563239 TFDP2Q14188 446 aa8.62□□□□□ -1.03
UBR1-204ENST00000563239 ZNF235Q14590 738 aa8.62□□□□□ -1.03
UBR1-204ENST00000563239 GRM3Q14832 879 aa8.62□□□□□ -1.03
UBR1-204ENST00000563239 PDK1Q15118 436 aa8.62□□□□□ -1.03
UBR1-204ENST00000563239 PRKD1Q15139 912 aaPredicted RBP8.62□□□□□ -1.03
UBR1-204ENST00000563239 UGP2Q16851 508 aa8.62□□□□□ -1.03
UBR1-204ENST00000563239 RSPO4Q2I0M5 234 aaPredicted RBP8.62□□□□□ -1.03
UBR1-204ENST00000563239 KIF19Q2TAC6 998 aa8.62□□□□□ -1.03
UBR1-204ENST00000563239 TMEM52BQ4KMG9 183 aa8.62□□□□□ -1.03
UBR1-204ENST00000563239 AASDHQ4L235 1098 aaPredicted RBP8.62□□□□□ -1.03
UBR1-204ENST00000563239 TIGD7Q6NT04 549 aaPredicted RBP8.62□□□□□ -1.03
UBR1-204ENST00000563239 BRAT1Q6PJG6 821 aa8.62□□□□□ -1.03
UBR1-204ENST00000563239 BBS12Q6ZW61 710 aa8.62□□□□□ -1.03
UBR1-204ENST00000563239 PEX26Q7Z412 305 aa8.62□□□□□ -1.03
UBR1-204ENST00000563239 RABEPKQ7Z6M1 372 aa8.62□□□□□ -1.03
UBR1-204ENST00000563239 TTC7BQ86TV6 843 aa8.62□□□□□ -1.03
UBR1-204ENST00000563239 PRPF39Q86UA1 669 aaKnown RBP8.62□□□□□ -1.03
UBR1-204ENST00000563239 TXLNBQ8N3L3 684 aa8.62□□□□□ -1.03
UBR1-204ENST00000563239 C12orf50Q8NA57 414 aaPredicted RBP8.62□□□□□ -1.03
UBR1-204ENST00000563239 TMEM145Q8NBT3 493 aa8.62□□□□□ -1.03
UBR1-204ENST00000563239 CCNYQ8ND76 341 aa8.62□□□□□ -1.03
UBR1-204ENST00000563239 TRAF3IP1Q8TDR0 691 aaPredicted RBP8.62□□□□□ -1.03
UBR1-204ENST00000563239 RBM41Q96IZ5 413 aaKnown RBP8.62□□□□□ -1.03
UBR1-204ENST00000563239 KLF6Q99612 283 aaPredicted RBP8.62□□□□□ -1.03
UBR1-204ENST00000563239 SEMA3CQ99985 751 aa8.62□□□□□ -1.03
UBR1-204ENST00000563239 EDEM2Q9BV94 578 aa8.62□□□□□ -1.03
UBR1-204ENST00000563239 C1QTNF2Q9BXJ5 285 aa8.62□□□□□ -1.03
UBR1-204ENST00000563239 NUSAP1Q9BXS6 441 aaKnown RBP8.62□□□□□ -1.03
UBR1-204ENST00000563239 OSBPL8Q9BZF1 889 aa8.62□□□□□ -1.03
UBR1-204ENST00000563239 TSGA10Q9BZW7 698 aa8.62□□□□□ -1.03
UBR1-204ENST00000563239 ATP13A3Q9H7F0 1226 aa8.62□□□□□ -1.03
UBR1-204ENST00000563239 PCDH12Q9NPG4 1184 aa8.62□□□□□ -1.03
UBR1-204ENST00000563239 SCUBE2Q9NQ36 999 aa8.62□□□□□ -1.03
UBR1-204ENST00000563239 DLL3Q9NYJ7 618 aa8.62□□□□□ -1.03
UBR1-204ENST00000563239 AMFRQ9UKV5 643 aa8.62□□□□□ -1.03
UBR1-204ENST00000563239 TPX2Q9ULW0 747 aaKnown RBP8.62□□□□□ -1.03
UBR1-204ENST00000563239 GUCA1BQ9UMX6 200 aa8.62□□□□□ -1.03
UBR1-204ENST00000563239 DMTF1Q9Y222 760 aa8.62□□□□□ -1.03
UBR1-204ENST00000563239 EFR3BQ9Y2G0 817 aa8.62□□□□□ -1.03
UBR1-204ENST00000563239 PPP2R2CQ9Y2T4 447 aa8.62□□□□□ -1.03
UBR1-204ENST00000563239 SBDSQ9Y3A5 250 aaKnown RBP eCLIP8.62□□□□□ -1.03
UBR1-204ENST00000563239 PCDHGC4Q9Y5F7 938 aa8.62□□□□□ -1.03
UBR1-204ENST00000563239 DOCK9Q9BZ29 2069 aa8.61□□□□□ -1.03
UBR1-204ENST00000563239 SHROOM3Q8TF72 1996 aa8.61□□□□□ -1.03
UBR1-204ENST00000563239 ADAMTS9Q9P2N4 1935 aa8.61□□□□□ -1.03
UBR1-204ENST00000563239 LOC107983988A0A1B0GUW6 1196 aaPredicted RBP8.61□□□□□ -1.03
UBR1-204ENST00000563239 C4orf47A7E2U8 309 aa8.61□□□□□ -1.03
UBR1-204ENST00000563239 MIF4GDA9UHW6 222 aaKnown RBP8.61□□□□□ -1.03
UBR1-204ENST00000563239 UPK3BL1B0FP48 263 aa8.61□□□□□ -1.03
UBR1-204ENST00000563239 UPK3BL2E5RIL1 263 aa8.61□□□□□ -1.03
UBR1-204ENST00000563239 SLC30A4O14863 429 aa8.61□□□□□ -1.03
UBR1-204ENST00000563239 VILLO15195 856 aa8.61□□□□□ -1.03
UBR1-204ENST00000563239 SLC31A1O15431 190 aa8.61□□□□□ -1.03
UBR1-204ENST00000563239 MMP20O60882 483 aa8.61□□□□□ -1.03
UBR1-204ENST00000563239 SOCS5O75159 536 aa8.61□□□□□ -1.03
UBR1-204ENST00000563239 PRLP01236 227 aa8.61□□□□□ -1.03
UBR1-204ENST00000563239 PDHA1P08559 390 aa8.61□□□□□ -1.03
UBR1-204ENST00000563239 CCDC175P0C221 793 aa8.61□□□□□ -1.03
UBR1-204ENST00000563239 GM2AP17900 193 aa8.61□□□□□ -1.03
UBR1-204ENST00000563239 TGM2P21980 687 aa8.61□□□□□ -1.03
UBR1-204ENST00000563239 SERPINA4P29622 427 aa8.61□□□□□ -1.03
UBR1-204ENST00000563239 NUDT1P36639 197 aa8.61□□□□□ -1.03
UBR1-204ENST00000563239 MMP12P39900 470 aa8.61□□□□□ -1.03
UBR1-204ENST00000563239 PI4KAP42356 2102 aa8.61□□□□□ -1.03
UBR1-204ENST00000563239 CTSKP43235 329 aa8.61□□□□□ -1.03
UBR1-204ENST00000563239 MAPK8P45983 427 aa8.61□□□□□ -1.03
UBR1-204ENST00000563239 GRIA4P48058 902 aa8.61□□□□□ -1.03
UBR1-204ENST00000563239 SUOXP51687 545 aa8.61□□□□□ -1.03
UBR1-204ENST00000563239 RPS21P63220 83 aaKnown RBP8.61□□□□□ -1.03
UBR1-204ENST00000563239 DSC2Q02487 901 aa8.61□□□□□ -1.03
UBR1-204ENST00000563239 AP1B1Q10567 949 aa8.61□□□□□ -1.03
UBR1-204ENST00000563239 WASHC5Q12768 1159 aa8.61□□□□□ -1.03
UBR1-204ENST00000563239 RALGDSQ12967 914 aa8.61□□□□□ -1.03
UBR1-204ENST00000563239 ZNF211Q13398 564 aaPredicted RBP8.61□□□□□ -1.03
UBR1-204ENST00000563239 PTPRRQ15256 657 aa8.61□□□□□ -1.03
Retrieved 100 of 20,778 RNA–protein pairs in 28.9 ms