RNA–Protein interactions for RNA: ENST00000563226.1

SMPD3-203, Transcript of sphingomyelin phosphodiesterase 3, humanhuman

TSL 1 (best) BASIC

Gene SMPD3, Length 2,093 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMPD3-203ENST00000563226 ZNF177Q13360 481 aaPredicted RBP19.25■□□□□ 0.67
SMPD3-203ENST00000563226 TCEAL8Q8IYN2 117 aa19.25■□□□□ 0.67
SMPD3-203ENST00000563226 FSTL5Q8N475 847 aaPredicted RBP19.25■□□□□ 0.67
SMPD3-203ENST00000563226 DDX51Q8N8A6 666 aaKnown RBP eCLIP19.25■□□□□ 0.67
SMPD3-203ENST00000563226 OR6P1Q8NGX9 317 aa19.25■□□□□ 0.67
SMPD3-203ENST00000563226 ADAMTS19Q8TE59 1207 aa19.25■□□□□ 0.67
SMPD3-203ENST00000563226 NXNL1Q96CM4 212 aa19.25■□□□□ 0.67
SMPD3-203ENST00000563226 SCYL1Q96KG9 808 aa19.25■□□□□ 0.67
SMPD3-203ENST00000563226 GPR78Q96P69 363 aa19.25■□□□□ 0.67
SMPD3-203ENST00000563226 PSKH2Q96QS6 385 aa19.25■□□□□ 0.67
SMPD3-203ENST00000563226 TRIB3Q96RU7 358 aa19.25■□□□□ 0.67
SMPD3-203ENST00000563226 CINPQ9BW66 212 aaPredicted RBP19.25■□□□□ 0.67
SMPD3-203ENST00000563226 SUDS3Q9H7L9 328 aaPredicted RBP19.25■□□□□ 0.67
SMPD3-203ENST00000563226 IL21Q9HBE4 155 aa19.25■□□□□ 0.67
SMPD3-203ENST00000563226 SEPT3Q9UH03 358 aa19.25■□□□□ 0.67
SMPD3-203ENST00000563226 ACOT9Q9Y305 439 aa19.25■□□□□ 0.67
SMPD3-203ENST00000563226 CBX4O00257 560 aa19.24■□□□□ 0.67
SMPD3-203ENST00000563226 F11P03951 625 aa19.24■□□□□ 0.67
SMPD3-203ENST00000563226 SERPINF2P08697 491 aa19.24■□□□□ 0.67
SMPD3-203ENST00000563226 HLA-DPA1P20036 260 aa19.24■□□□□ 0.67
SMPD3-203ENST00000563226 SMAD3P84022 425 aaKnown RBP19.24■□□□□ 0.67
SMPD3-203ENST00000563226 TUBB3Q13509 450 aa19.24■□□□□ 0.67
SMPD3-203ENST00000563226 ARMC3Q5W041 872 aa19.24■□□□□ 0.67
SMPD3-203ENST00000563226 RNF219Q5W0B1 726 aaPredicted RBP19.24■□□□□ 0.67
SMPD3-203ENST00000563226 LRRC8EQ6NSJ5 796 aa19.24■□□□□ 0.67
SMPD3-203ENST00000563226 KIAA0408Q6ZU52 694 aa19.24■□□□□ 0.67
SMPD3-203ENST00000563226 CHST9Q7L1S5 443 aa19.24■□□□□ 0.67
SMPD3-203ENST00000563226 TREML1Q86YW5 311 aa19.24■□□□□ 0.67
SMPD3-203ENST00000563226 CILP2Q8IUL8 1156 aa19.24■□□□□ 0.67
SMPD3-203ENST00000563226 DNAJC1Q96KC8 554 aaKnown RBP19.24■□□□□ 0.67
SMPD3-203ENST00000563226 GATA5Q9BWX5 397 aaPredicted RBP19.24■□□□□ 0.67
SMPD3-203ENST00000563226 TBC1D10AQ9BXI6 508 aa19.24■□□□□ 0.67
SMPD3-203ENST00000563226 C11orf49Q9H6J7 331 aa19.24■□□□□ 0.67
SMPD3-203ENST00000563226 MRPL17Q9NRX2 175 aaKnown RBP19.24■□□□□ 0.67
SMPD3-203ENST00000563226 OXSMQ9NWU1 459 aa19.24■□□□□ 0.67
SMPD3-203ENST00000563226 LNPEPQ9UIQ6 1025 aa19.24■□□□□ 0.67
SMPD3-203ENST00000563226 TBC1D30Q9Y2I9 924 aa19.24■□□□□ 0.67
SMPD3-203ENST00000563226 KIAA0100Q14667 2235 aaKnown RBP19.24■□□□□ 0.67
SMPD3-203ENST00000563226 TARM1B6A8C7 271 aa19.24■□□□□ 0.67
SMPD3-203ENST00000563226 TRAFD1O14545 582 aaPredicted RBP19.24■□□□□ 0.67
SMPD3-203ENST00000563226 FGF1P05230 155 aa19.24■□□□□ 0.67
SMPD3-203ENST00000563226 LEPRP48357 1165 aaKnown RBP19.24■□□□□ 0.67
SMPD3-203ENST00000563226 EPHB3P54753 998 aa19.24■□□□□ 0.67
SMPD3-203ENST00000563226 CYTH1Q15438 398 aa19.24■□□□□ 0.67
SMPD3-203ENST00000563226 SNCBQ16143 134 aa19.24■□□□□ 0.67
SMPD3-203ENST00000563226 FSCBQ5H9T9 825 aa19.24■□□□□ 0.67
SMPD3-203ENST00000563226 TXNDC8Q6A555 127 aa19.24■□□□□ 0.67
SMPD3-203ENST00000563226 ZYG11AQ6WRX3 759 aa19.24■□□□□ 0.67
SMPD3-203ENST00000563226 OTOP2Q7RTS6 562 aa19.24■□□□□ 0.67
SMPD3-203ENST00000563226 WDR75Q8IWA0 830 aaKnown RBP19.24■□□□□ 0.67
SMPD3-203ENST00000563226 ARL14EPQ8N8R7 260 aaPredicted RBP19.24■□□□□ 0.67
SMPD3-203ENST00000563226 PPP4R1Q8TF05 950 aa19.24■□□□□ 0.67
SMPD3-203ENST00000563226 TBATAQ96M53 351 aa19.24■□□□□ 0.67
SMPD3-203ENST00000563226 YME1L1Q96TA2 773 aa19.24■□□□□ 0.67
SMPD3-203ENST00000563226 MIPEPQ99797 713 aa19.24■□□□□ 0.67
SMPD3-203ENST00000563226 MFSD1Q9H3U5 465 aa19.24■□□□□ 0.67
SMPD3-203ENST00000563226 RETREG1Q9H6L5 497 aa19.24■□□□□ 0.67
SMPD3-203ENST00000563226 IGF2BP1Q9NZI8 577 aaKnown RBP eCLIP19.24■□□□□ 0.67
SMPD3-203ENST00000563226 XPR1Q9UBH6 696 aa19.24■□□□□ 0.67
SMPD3-203ENST00000563226 PCDHB12Q9Y5F1 795 aa19.24■□□□□ 0.67
SMPD3-203ENST00000563226 ZNF195O14628 629 aa19.23■□□□□ 0.67
SMPD3-203ENST00000563226 SLC7A4O43246 635 aa19.23■□□□□ 0.67
SMPD3-203ENST00000563226 GREM1O60565 184 aa19.23■□□□□ 0.67
SMPD3-203ENST00000563226 TRIM13O60858 407 aa19.23■□□□□ 0.67
SMPD3-203ENST00000563226 LILRB3O75022 631 aa19.23■□□□□ 0.67
SMPD3-203ENST00000563226 CA8P35219 290 aa19.23■□□□□ 0.67
SMPD3-203ENST00000563226 CCR10P46092 362 aa19.23■□□□□ 0.67
SMPD3-203ENST00000563226 POLD2P49005 469 aa19.23■□□□□ 0.67
SMPD3-203ENST00000563226 SCNN1BP51168 640 aa19.23■□□□□ 0.67
SMPD3-203ENST00000563226 ALDH18A1P54886 795 aaKnown RBP19.23■□□□□ 0.67
SMPD3-203ENST00000563226 KRT72Q14CN4 511 aa19.23■□□□□ 0.67
SMPD3-203ENST00000563226 FAM91A1Q658Y4 838 aa19.23■□□□□ 0.67
SMPD3-203ENST00000563226 ZNF781Q8N8C0 355 aa19.23■□□□□ 0.67
SMPD3-203ENST00000563226 OR13C4Q8NGS5 318 aa19.23■□□□□ 0.67
SMPD3-203ENST00000563226 CALML6Q8TD86 181 aa19.23■□□□□ 0.67
SMPD3-203ENST00000563226 STYXQ8WUJ0 223 aa19.23■□□□□ 0.67
SMPD3-203ENST00000563226 NSL1Q96IY1 281 aa19.23■□□□□ 0.67
SMPD3-203ENST00000563226 RILPQ96NA2 401 aa19.23■□□□□ 0.67
SMPD3-203ENST00000563226 TSNARE1Q96NA8 513 aa19.23■□□□□ 0.67
SMPD3-203ENST00000563226 SMIM14Q96QK8 99 aa19.23■□□□□ 0.67
SMPD3-203ENST00000563226 BAIAP2L1Q9UHR4 511 aa19.23■□□□□ 0.67
SMPD3-203ENST00000563226 MTF2Q9Y483 593 aaPredicted RBP19.23■□□□□ 0.67
SMPD3-203ENST00000563226 DENND4CQ5VZ89 1909 aa19.23■□□□□ 0.67
SMPD3-203ENST00000563226 CAPN14A8MX76 684 aa19.23■□□□□ 0.67
SMPD3-203ENST00000563226 SNAP91O60641 907 aa19.23■□□□□ 0.67
SMPD3-203ENST00000563226 CR2P20023 1033 aa19.23■□□□□ 0.67
SMPD3-203ENST00000563226 PTPN4P29074 926 aa19.23■□□□□ 0.67
SMPD3-203ENST00000563226 CRABP2P29373 138 aa19.23■□□□□ 0.67
SMPD3-203ENST00000563226 PRAMEP78395 509 aa19.23■□□□□ 0.67
SMPD3-203ENST00000563226 ARF5P84085 180 aa19.23■□□□□ 0.67
SMPD3-203ENST00000563226 USP4Q13107 963 aa19.23■□□□□ 0.67
SMPD3-203ENST00000563226 VWA5B1Q5TIE3 1220 aa19.23■□□□□ 0.67
SMPD3-203ENST00000563226 LINGO4Q6UY18 593 aa19.23■□□□□ 0.67
SMPD3-203ENST00000563226 SETD3Q86TU7 594 aaPredicted RBP19.23■□□□□ 0.67
SMPD3-203ENST00000563226 BBS5Q8N3I7 341 aa19.23■□□□□ 0.67
SMPD3-203ENST00000563226 TTC16Q8NEE8 873 aa19.23■□□□□ 0.67
SMPD3-203ENST00000563226 MUC3BQ9H195 1237 aa19.23■□□□□ 0.67
SMPD3-203ENST00000563226 STOML2Q9UJZ1 356 aa19.23■□□□□ 0.67
SMPD3-203ENST00000563226 SPO11Q9Y5K1 396 aa19.23■□□□□ 0.67
SMPD3-203ENST00000563226 NRG2O14511 850 aaPredicted RBP19.22■□□□□ 0.67
Retrieved 100 of 20,778 RNA–protein pairs in 32.2 ms