RNA–Protein interactions for RNA: ENST00000563220.1

COMMD4-208, Transcript of COMM domain containing 4, humanhuman

TSL 2

Gene COMMD4, Length 1,897 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COMMD4-208ENST00000563220 TIFABQ6ZNK6 161 aa18.18■□□□□ 0.5
COMMD4-208ENST00000563220 GET4Q7L5D6 327 aaPredicted RBP18.18■□□□□ 0.5
COMMD4-208ENST00000563220 EFHBQ8N7U6 833 aa18.18■□□□□ 0.5
COMMD4-208ENST00000563220 OR13J1Q8NGT2 312 aa18.18■□□□□ 0.5
COMMD4-208ENST00000563220 BLOC1S5Q8TDH9 187 aa18.18■□□□□ 0.5
COMMD4-208ENST00000563220 OSCP1Q8WVF1 389 aa18.18■□□□□ 0.5
COMMD4-208ENST00000563220 ALKBH8Q96BT7 664 aaKnown RBP18.18■□□□□ 0.5
COMMD4-208ENST00000563220 ASIC4Q96FT7 647 aa18.18■□□□□ 0.5
COMMD4-208ENST00000563220 SMIM14Q96QK8 99 aa18.18■□□□□ 0.5
COMMD4-208ENST00000563220 DUS2Q9NX74 493 aaKnown RBP18.18■□□□□ 0.5
COMMD4-208ENST00000563220 NKIRAS1Q9NYS0 192 aa18.18■□□□□ 0.5
COMMD4-208ENST00000563220 MYOFQ9NZM1 2061 aa18.18■□□□□ 0.5
COMMD4-208ENST00000563220 PAPSS2O95340 614 aaPredicted RBP18.18■□□□□ 0.5
COMMD4-208ENST00000563220 ITGA2BP08514 1039 aa18.18■□□□□ 0.5
COMMD4-208ENST00000563220 PABPC1P11940 636 aaKnown RBP18.18■□□□□ 0.5
COMMD4-208ENST00000563220 CA4P22748 312 aa18.18■□□□□ 0.5
COMMD4-208ENST00000563220 CNTFP26441 200 aa18.18■□□□□ 0.5
COMMD4-208ENST00000563220 DGKKQ5KSL6 1271 aa18.18■□□□□ 0.5
COMMD4-208ENST00000563220 SMARCD2Q92925 531 aa18.18■□□□□ 0.5
COMMD4-208ENST00000563220 C12orf65Q9H3J6 166 aaKnown RBP18.18■□□□□ 0.5
COMMD4-208ENST00000563220 TXNDC16Q9P2K2 825 aa18.18■□□□□ 0.5
COMMD4-208ENST00000563220 ARL5AQ9Y689 179 aa18.18■□□□□ 0.5
COMMD4-208ENST00000563220 SRCP12931 536 aa18.17■□□□□ 0.5
COMMD4-208ENST00000563220 EML3Q32P44 896 aa18.17■□□□□ 0.5
COMMD4-208ENST00000563220 ADIPOR2Q86V24 386 aa18.17■□□□□ 0.5
COMMD4-208ENST00000563220 CNTN4Q8IWV2 1026 aa18.17■□□□□ 0.5
COMMD4-208ENST00000563220 OR6K2Q8NGY2 324 aa18.17■□□□□ 0.5
COMMD4-208ENST00000563220 GDAP1Q8TB36 358 aa18.17■□□□□ 0.5
COMMD4-208ENST00000563220 BRSK1Q8TDC3 778 aa18.17■□□□□ 0.5
COMMD4-208ENST00000563220 RMDN1Q96DB5 314 aa18.17■□□□□ 0.5
COMMD4-208ENST00000563220 RBBP8Q99708 897 aa18.17■□□□□ 0.5
COMMD4-208ENST00000563220 MCMBPQ9BTE3 642 aa18.17■□□□□ 0.5
COMMD4-208ENST00000563220 EPN3Q9H201 632 aa18.17■□□□□ 0.5
COMMD4-208ENST00000563220 TNKS2Q9H2K2 1166 aa18.17■□□□□ 0.5
COMMD4-208ENST00000563220 IGF2BP1Q9NZI8 577 aaKnown RBP eCLIP18.17■□□□□ 0.5
COMMD4-208ENST00000563220 EVLQ9UI08 416 aaPredicted RBP18.17■□□□□ 0.5
COMMD4-208ENST00000563220 GGT7Q9UJ14 662 aa18.17■□□□□ 0.5
COMMD4-208ENST00000563220 SPO11Q9Y5K1 396 aa18.17■□□□□ 0.5
COMMD4-208ENST00000563220 MYO9BQ13459 2157 aa18.17■□□□□ 0.5
COMMD4-208ENST00000563220 BUD23O43709 281 aaKnown RBP18.16■□□□□ 0.5
COMMD4-208ENST00000563220 ASMTLO95671 621 aa18.16■□□□□ 0.5
COMMD4-208ENST00000563220 ALDOAP04075 364 aaKnown RBP18.16■□□□□ 0.5
COMMD4-208ENST00000563220 CYP17A1P05093 508 aa18.16■□□□□ 0.5
COMMD4-208ENST00000563220 PAMP19021 973 aa18.16■□□□□ 0.5
COMMD4-208ENST00000563220 GABRB3P28472 473 aa18.16■□□□□ 0.5
COMMD4-208ENST00000563220 SLC8A1P32418 973 aa18.16■□□□□ 0.5
COMMD4-208ENST00000563220 ABCG1P45844 678 aa18.16■□□□□ 0.5
COMMD4-208ENST00000563220 ARSDP51689 593 aa18.16■□□□□ 0.5
COMMD4-208ENST00000563220 PTPRCAPQ14761 206 aa18.16■□□□□ 0.5
COMMD4-208ENST00000563220 RALGPS1Q5JS13 557 aa18.16■□□□□ 0.5
COMMD4-208ENST00000563220 TMEM215Q68D42 235 aa18.16■□□□□ 0.5
COMMD4-208ENST00000563220 CDHR3Q6ZTQ4 885 aa18.16■□□□□ 0.5
COMMD4-208ENST00000563220 KIAA0907Q7Z7F0 614 aaPredicted RBP18.16■□□□□ 0.5
COMMD4-208ENST00000563220 DENND6AQ8IWF6 608 aa18.16■□□□□ 0.5
COMMD4-208ENST00000563220 KIAA1958Q8N8K9 716 aa18.16■□□□□ 0.5
COMMD4-208ENST00000563220 LPCAT1Q8NF37 534 aa18.16■□□□□ 0.5
COMMD4-208ENST00000563220 BPIFB1Q8TDL5 484 aa18.16■□□□□ 0.5
COMMD4-208ENST00000563220 TCP10LQ8TDR4 215 aa18.16■□□□□ 0.5
COMMD4-208ENST00000563220 MYLIPQ8WY64 445 aa18.16■□□□□ 0.5
COMMD4-208ENST00000563220 SGSM3Q96HU1 749 aa18.16■□□□□ 0.5
COMMD4-208ENST00000563220 ZFYVE19Q96K21 471 aa18.16■□□□□ 0.5
COMMD4-208ENST00000563220 GDE1Q9NZC3 331 aa18.16■□□□□ 0.5
COMMD4-208ENST00000563220 FBXO10Q9UK96 956 aa18.16■□□□□ 0.5
COMMD4-208ENST00000563220 HS3ST2Q9Y278 367 aa18.16■□□□□ 0.5
COMMD4-208ENST00000563220 PRRC2BQ5JSZ5 2229 aaKnown RBP18.16■□□□□ 0.5
COMMD4-208ENST00000563220 CXorf51AA0A1B0GTR3 108 aa18.16■□□□□ 0.5
COMMD4-208ENST00000563220 CCL22O00626 93 aa18.16■□□□□ 0.5
COMMD4-208ENST00000563220 AURKAO14965 403 aa18.16■□□□□ 0.5
COMMD4-208ENST00000563220 FZD6O60353 706 aa18.16■□□□□ 0.5
COMMD4-208ENST00000563220 GKP32189 559 aa18.16■□□□□ 0.5
COMMD4-208ENST00000563220 SPRP35270 261 aaPredicted RBP18.16■□□□□ 0.5
COMMD4-208ENST00000563220 CCNFP41002 786 aa18.16■□□□□ 0.5
COMMD4-208ENST00000563220 NEK3P51956 506 aa18.16■□□□□ 0.5
COMMD4-208ENST00000563220 AP1S1P61966 158 aa18.16■□□□□ 0.5
COMMD4-208ENST00000563220 DNAJC3Q13217 504 aa18.16■□□□□ 0.5
COMMD4-208ENST00000563220 CTBP1Q13363 440 aa18.16■□□□□ 0.5
COMMD4-208ENST00000563220 PTPRRQ15256 657 aa18.16■□□□□ 0.5
COMMD4-208ENST00000563220 NLRP9Q7RTR0 991 aa18.16■□□□□ 0.5
COMMD4-208ENST00000563220 CAMK1DQ8IU85 385 aa18.16■□□□□ 0.5
COMMD4-208ENST00000563220 PDCD6IPQ8WUM4 868 aaKnown RBP18.16■□□□□ 0.5
COMMD4-208ENST00000563220 ATXN7L3BQ96GX2 97 aa18.16■□□□□ 0.5
COMMD4-208ENST00000563220 CCDC134Q9H6E4 229 aa18.16■□□□□ 0.5
COMMD4-208ENST00000563220 SLC17A7Q9P2U7 560 aa18.16■□□□□ 0.5
COMMD4-208ENST00000563220 SLCO3A1Q9UIG8 710 aa18.16■□□□□ 0.5
COMMD4-208ENST00000563220 GRID1Q9ULK0 1009 aa18.16■□□□□ 0.5
COMMD4-208ENST00000563220 MTO1Q9Y2Z2 717 aaKnown RBP18.16■□□□□ 0.5
COMMD4-208ENST00000563220 RRP15Q9Y3B9 282 aaKnown RBP18.16■□□□□ 0.5
COMMD4-208ENST00000563220 MYLKQ15746 1914 aa18.16■□□□□ 0.5
COMMD4-208ENST00000563220 C2orf16Q68DN1 1984 aa18.15■□□□□ 0.5
COMMD4-208ENST00000563220 GMNCA6NCL1 334 aa18.15■□□□□ 0.5
COMMD4-208ENST00000563220 SRRM3A6NNA2 597 aaPredicted RBP18.15■□□□□ 0.5
COMMD4-208ENST00000563220 HEPACAM2A8MVW5 462 aa18.15■□□□□ 0.5
COMMD4-208ENST00000563220 ANKRD66B4E2M5 251 aa18.15■□□□□ 0.5
COMMD4-208ENST00000563220 SIN3BO75182 1162 aa18.15■□□□□ 0.5
COMMD4-208ENST00000563220 AHSGP02765 367 aa18.15■□□□□ 0.5
COMMD4-208ENST00000563220 BMP1P13497 986 aa18.15■□□□□ 0.5
COMMD4-208ENST00000563220 ARSAP15289 507 aa18.15■□□□□ 0.5
COMMD4-208ENST00000563220 CSNK1DP48730 415 aa18.15■□□□□ 0.5
COMMD4-208ENST00000563220 LIMK2P53671 638 aa18.15■□□□□ 0.5
COMMD4-208ENST00000563220 CSE1LP55060 971 aaKnown RBP18.15■□□□□ 0.5
Retrieved 100 of 20,778 RNA–protein pairs in 37.3 ms