RNA–Protein interactions for RNA: ENST00000563009.5

EDC3-206, Transcript of enhancer of mRNA decapping 3, humanhuman

TSL 3

Gene EDC3, Length 967 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
EDC3-206ENST00000563009 UPK3BL1B0FP48 263 aa15.36■□□□□ 0.05
EDC3-206ENST00000563009 UPK3BL2E5RIL1 263 aa15.36■□□□□ 0.05
EDC3-206ENST00000563009 LATO43561 262 aa15.36■□□□□ 0.05
EDC3-206ENST00000563009 FZD6O60353 706 aa15.36■□□□□ 0.05
EDC3-206ENST00000563009 PGLSO95336 258 aa15.36■□□□□ 0.05
EDC3-206ENST00000563009 IGHV4-34P06331 123 aa15.36■□□□□ 0.05
EDC3-206ENST00000563009 CD86P42081 329 aa15.36■□□□□ 0.05
EDC3-206ENST00000563009 CCR5P51681 352 aa15.36■□□□□ 0.05
EDC3-206ENST00000563009 POLR2LP62875 67 aaKnown RBP15.36■□□□□ 0.05
EDC3-206ENST00000563009 LONRF2Q1L5Z9 754 aa15.36■□□□□ 0.05
EDC3-206ENST00000563009 CFAP58Q5T655 872 aa15.36■□□□□ 0.05
EDC3-206ENST00000563009 LYSMD4Q5XG99 296 aa15.36■□□□□ 0.05
EDC3-206ENST00000563009 PID1Q7Z2X4 250 aa15.36■□□□□ 0.05
EDC3-206ENST00000563009 TRIM69Q86WT6 500 aa15.36■□□□□ 0.05
EDC3-206ENST00000563009 ZC3H8Q8N5P1 291 aaKnown RBP eCLIP15.36■□□□□ 0.05
EDC3-206ENST00000563009 DEFB119Q8N690 84 aa15.36■□□□□ 0.05
EDC3-206ENST00000563009 ACTRT1Q8TDG2 376 aa15.36■□□□□ 0.05
EDC3-206ENST00000563009 C1orf54Q8WWF1 131 aa15.36■□□□□ 0.05
EDC3-206ENST00000563009 DNASE2BQ8WZ79 361 aa15.36■□□□□ 0.05
EDC3-206ENST00000563009 BIRC7Q96CA5 298 aa15.36■□□□□ 0.05
EDC3-206ENST00000563009 TRIM44Q96DX7 344 aaPredicted RBP15.36■□□□□ 0.05
EDC3-206ENST00000563009 RTP4Q96DX8 246 aa15.36■□□□□ 0.05
EDC3-206ENST00000563009 MS4A14Q96JA4 679 aa15.36■□□□□ 0.05
EDC3-206ENST00000563009 TDRD1Q9BXT4 1180 aaKnown RBP15.36■□□□□ 0.05
EDC3-206ENST00000563009 PCDHB9Q9Y5E1 797 aa15.36■□□□□ 0.05
EDC3-206ENST00000563009 TBC1D3DA0A087WVF3 549 aa15.35■□□□□ 0.05
EDC3-206ENST00000563009 TBC1D3IA0A087WXS9 549 aa15.35■□□□□ 0.05
EDC3-206ENST00000563009 TBC1D3EA0A087X179 549 aa15.35■□□□□ 0.05
EDC3-206ENST00000563009 TBC1D3KA0A087X1G2 549 aa15.35■□□□□ 0.05
EDC3-206ENST00000563009 CTAGE9A4FU28 777 aa15.35■□□□□ 0.05
EDC3-206ENST00000563009 TBC1D3FA6NER0 549 aaPredicted RBP15.35■□□□□ 0.05
EDC3-206ENST00000563009 C5orf60A6NFR6 353 aa15.35■□□□□ 0.05
EDC3-206ENST00000563009 FAM47DPA6NHR8 397 aa15.35■□□□□ 0.05
EDC3-206ENST00000563009 TBC1D3LB9A6J9 549 aa15.35■□□□□ 0.05
EDC3-206ENST00000563009 PGRMC1O00264 195 aaKnown RBP15.35■□□□□ 0.05
EDC3-206ENST00000563009 TSPAN6O43657 245 aa15.35■□□□□ 0.05
EDC3-206ENST00000563009 OPHN1O60890 802 aa15.35■□□□□ 0.05
EDC3-206ENST00000563009 STK10O94804 968 aaKnown RBP15.35■□□□□ 0.05
EDC3-206ENST00000563009 EPN2O95208 641 aa15.35■□□□□ 0.05
EDC3-206ENST00000563009 ITGAVP06756 1048 aa15.35■□□□□ 0.05
EDC3-206ENST00000563009 TBC1D3HP0C7X1 549 aa15.35■□□□□ 0.05
EDC3-206ENST00000563009 NFKB1P19838 968 aa15.35■□□□□ 0.05
EDC3-206ENST00000563009 CA4P22748 312 aa15.35■□□□□ 0.05
EDC3-206ENST00000563009 DHPSP49366 369 aaPredicted RBP15.35■□□□□ 0.05
EDC3-206ENST00000563009 ETF1P62495 437 aaKnown RBP15.35■□□□□ 0.05
EDC3-206ENST00000563009 PPP2CBP62714 309 aa15.35■□□□□ 0.05
EDC3-206ENST00000563009 PPP2CAP67775 309 aa15.35■□□□□ 0.05
EDC3-206ENST00000563009 ANKRD20A2Q5SQ80 823 aa15.35■□□□□ 0.05
EDC3-206ENST00000563009 ARMC12Q5T9G4 340 aa15.35■□□□□ 0.05
EDC3-206ENST00000563009 ANKRD20A1Q5TYW2 823 aa15.35■□□□□ 0.05
EDC3-206ENST00000563009 ANKRD20A3Q5VUR7 823 aa15.35■□□□□ 0.05
EDC3-206ENST00000563009 PEAR1Q5VY43 1037 aaPredicted RBP15.35■□□□□ 0.05
EDC3-206ENST00000563009 TBC1D3GQ6DHY5 549 aa15.35■□□□□ 0.05
EDC3-206ENST00000563009 TBC1D3CQ6IPX1 549 aa15.35■□□□□ 0.05
EDC3-206ENST00000563009 NYAP1Q6ZVC0 841 aa15.35■□□□□ 0.05
EDC3-206ENST00000563009 ARMCX6Q7L4S7 300 aa15.35■□□□□ 0.05
EDC3-206ENST00000563009 ZSCAN30Q86W11 494 aa15.35■□□□□ 0.05
EDC3-206ENST00000563009 TBC1D3Q8IZP1 549 aaPredicted RBP15.35■□□□□ 0.05
EDC3-206ENST00000563009 FAM71DQ8N9W8 422 aa15.35■□□□□ 0.05
EDC3-206ENST00000563009 SPATA13Q96N96 652 aa15.35■□□□□ 0.05
EDC3-206ENST00000563009 FCRL5Q96RD9 977 aa15.35■□□□□ 0.05
EDC3-206ENST00000563009 RBM15Q96T37 977 aaKnown RBP eCLIP15.35■□□□□ 0.054e-6■■■■□ 20
EDC3-206ENST00000563009 NAP1L3Q99457 506 aaPredicted RBP15.35■□□□□ 0.05
EDC3-206ENST00000563009 ORAI3Q9BRQ5 295 aa15.35■□□□□ 0.05
EDC3-206ENST00000563009 TMEM121Q9BTD3 319 aa15.35■□□□□ 0.05
EDC3-206ENST00000563009 GBA3Q9H227 469 aa15.35■□□□□ 0.05
EDC3-206ENST00000563009 PCDH12Q9NPG4 1184 aa15.35■□□□□ 0.05
EDC3-206ENST00000563009 HOMER3Q9NSC5 361 aa15.35■□□□□ 0.05
EDC3-206ENST00000563009 PPIL1Q9Y3C6 166 aa15.35■□□□□ 0.05
EDC3-206ENST00000563009 PCDHGA5Q9Y5G8 931 aa15.35■□□□□ 0.05
EDC3-206ENST00000563009 GPR179Q6PRD1 2367 aa15.34■□□□□ 0.05
EDC3-206ENST00000563009 PRR23AA6NEV1 266 aa15.34■□□□□ 0.05
EDC3-206ENST00000563009 RIOK3O14730 519 aaKnown RBP15.34■□□□□ 0.05
EDC3-206ENST00000563009 ZNF185O15231 689 aa15.34■□□□□ 0.05
EDC3-206ENST00000563009 RNGTTO60942 597 aaKnown RBP15.34■□□□□ 0.05
EDC3-206ENST00000563009 GCATO75600 419 aa15.34■□□□□ 0.05
EDC3-206ENST00000563009 CPP00450 1065 aa15.34■□□□□ 0.05
EDC3-206ENST00000563009 PRLP01236 227 aa15.34■□□□□ 0.05
EDC3-206ENST00000563009 RETP07949 1114 aa15.34■□□□□ 0.05
EDC3-206ENST00000563009 PDHA1P08559 390 aa15.34■□□□□ 0.05
EDC3-206ENST00000563009 ITPKAP23677 461 aa15.34■□□□□ 0.05
EDC3-206ENST00000563009 STIP1P31948 543 aaKnown RBP15.34■□□□□ 0.05
EDC3-206ENST00000563009 HOXD12P35452 270 aa15.34■□□□□ 0.05
EDC3-206ENST00000563009 MMP12P39900 470 aa15.34■□□□□ 0.05
EDC3-206ENST00000563009 GDF10P55107 478 aa15.34■□□□□ 0.05
EDC3-206ENST00000563009 RPL26P61254 145 aaKnown RBP15.34■□□□□ 0.05
EDC3-206ENST00000563009 ELP6Q0PNE2 266 aa15.34■□□□□ 0.05
EDC3-206ENST00000563009 TMEM259Q4ZIN3 620 aa15.34■□□□□ 0.05
EDC3-206ENST00000563009 LRRC73Q5JTD7 316 aa15.34■□□□□ 0.05
EDC3-206ENST00000563009 WDR45BQ5MNZ6 344 aa15.34■□□□□ 0.05
EDC3-206ENST00000563009 SYCP2LQ5T4T6 812 aa15.34■□□□□ 0.05
EDC3-206ENST00000563009 ITPRIPL1Q6GPH6 555 aa15.34■□□□□ 0.05
EDC3-206ENST00000563009 KIAA1161Q6NSJ0 714 aa15.34■□□□□ 0.05
EDC3-206ENST00000563009 HORMAD1Q86X24 394 aa15.34■□□□□ 0.05
EDC3-206ENST00000563009 PRELID2Q8N945 189 aa15.34■□□□□ 0.05
EDC3-206ENST00000563009 SPATA22Q8NHS9 363 aa15.34■□□□□ 0.05
EDC3-206ENST00000563009 CCDC110Q8TBZ0 833 aa15.34■□□□□ 0.05
EDC3-206ENST00000563009 PDCD6IPQ8WUM4 868 aaKnown RBP15.34■□□□□ 0.05
EDC3-206ENST00000563009 PIH1D2Q8WWB5 315 aa15.34■□□□□ 0.05
EDC3-206ENST00000563009 TRIB3Q96RU7 358 aa15.34■□□□□ 0.05
Retrieved 100 of 20,778 RNA–protein pairs in 40.1 ms