RNA–Protein interactions for RNA: ENST00000562626.1

CLK3-208, Transcript of CDC like kinase 3, humanhuman

TSL 2

Gene CLK3, Length 812 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLK3-208ENST00000562626 AREL1O15033 823 aa9.87□□□□□ -0.83
CLK3-208ENST00000562626 HTRA2O43464 458 aaPredicted RBP9.87□□□□□ -0.83
CLK3-208ENST00000562626 ZNF217O75362 1048 aa9.87□□□□□ -0.83
CLK3-208ENST00000562626 PGLSO95336 258 aa9.87□□□□□ -0.83
CLK3-208ENST00000562626 METTL18O95568 372 aa9.87□□□□□ -0.83
CLK3-208ENST00000562626 SEMA4FO95754 770 aa9.87□□□□□ -0.83
CLK3-208ENST00000562626 ZSCAN5DPP0CG00 497 aa9.87□□□□□ -0.83
CLK3-208ENST00000562626 CTPS1P17812 591 aa9.87□□□□□ -0.83
CLK3-208ENST00000562626 GM2AP17900 193 aa9.87□□□□□ -0.83
CLK3-208ENST00000562626 MAOBP27338 520 aa9.87□□□□□ -0.83
CLK3-208ENST00000562626 PSMB4P28070 264 aa9.87□□□□□ -0.83
CLK3-208ENST00000562626 HSPA9P38646 679 aaKnown RBP9.87□□□□□ -0.83
CLK3-208ENST00000562626 RPL6Q02878 288 aaKnown RBP9.87□□□□□ -0.83
CLK3-208ENST00000562626 RALGDSQ12967 914 aa9.87□□□□□ -0.83
CLK3-208ENST00000562626 BYSLQ13895 437 aaKnown RBP9.87□□□□□ -0.83
CLK3-208ENST00000562626 FGL2Q14314 439 aa9.87□□□□□ -0.83
CLK3-208ENST00000562626 FAM46CQ5VWP2 391 aa9.87□□□□□ -0.83
CLK3-208ENST00000562626 SEL1L3Q68CR1 1132 aa9.87□□□□□ -0.83
CLK3-208ENST00000562626 KDELC1Q6UW63 502 aa9.87□□□□□ -0.83
CLK3-208ENST00000562626 BZW1Q7L1Q6 419 aaKnown RBP9.87□□□□□ -0.83
CLK3-208ENST00000562626 TTC13Q8NBP0 860 aa9.87□□□□□ -0.83
CLK3-208ENST00000562626 OR14C36Q8NHC7 312 aa9.87□□□□□ -0.83
CLK3-208ENST00000562626 ACTRT1Q8TDG2 376 aa9.87□□□□□ -0.83
CLK3-208ENST00000562626 UBE2Q2Q8WVN8 375 aa9.87□□□□□ -0.83
CLK3-208ENST00000562626 PIH1D2Q8WWB5 315 aa9.87□□□□□ -0.83
CLK3-208ENST00000562626 KLK6Q92876 244 aa9.87□□□□□ -0.83
CLK3-208ENST00000562626 NKD2Q969F2 451 aaPredicted RBP9.87□□□□□ -0.83
CLK3-208ENST00000562626 LRIG1Q96JA1 1093 aa9.87□□□□□ -0.83
CLK3-208ENST00000562626 ZC3H10Q96K80 434 aaKnown RBP9.87□□□□□ -0.83
CLK3-208ENST00000562626 HSPA12BQ96MM6 686 aa9.87□□□□□ -0.83
CLK3-208ENST00000562626 TUBGCP5Q96RT8 1024 aa9.87□□□□□ -0.83
CLK3-208ENST00000562626 TRIB3Q96RU7 358 aa9.87□□□□□ -0.83
CLK3-208ENST00000562626 PRRX2Q99811 253 aa9.87□□□□□ -0.83
CLK3-208ENST00000562626 TDRD1Q9BXT4 1180 aaKnown RBP9.87□□□□□ -0.83
CLK3-208ENST00000562626 OSBPL1AQ9BXW6 950 aa9.87□□□□□ -0.83
CLK3-208ENST00000562626 HDAC8Q9BY41 377 aa9.87□□□□□ -0.83
CLK3-208ENST00000562626 SLC25A51Q9H1U9 297 aa9.87□□□□□ -0.83
CLK3-208ENST00000562626 ATP13A3Q9H7F0 1226 aa9.87□□□□□ -0.83
CLK3-208ENST00000562626 TMEM74BQ9NUR3 256 aa9.87□□□□□ -0.83
CLK3-208ENST00000562626 KLHL8Q9P2G9 620 aaPredicted RBP9.87□□□□□ -0.83
CLK3-208ENST00000562626 DKK3Q9UBP4 350 aa9.87□□□□□ -0.83
CLK3-208ENST00000562626 FZD4Q9ULV1 537 aa9.87□□□□□ -0.83
CLK3-208ENST00000562626 SCML1Q9UN30 329 aa9.87□□□□□ -0.83
CLK3-208ENST00000562626 ZFR2Q9UPR6 939 aaKnown RBP9.87□□□□□ -0.83
CLK3-208ENST00000562626 CHKBQ9Y259 395 aa9.87□□□□□ -0.83
CLK3-208ENST00000562626 FARP1Q9Y4F1 1045 aaPredicted RBP9.87□□□□□ -0.83
CLK3-208ENST00000562626 FADS3Q9Y5Q0 445 aa9.87□□□□□ -0.83
CLK3-208ENST00000562626 BPTFQ12830 3046 aa9.87□□□□□ -0.83
CLK3-208ENST00000562626 CTAGE9A4FU28 777 aa9.86□□□□□ -0.83
CLK3-208ENST00000562626 A8MX80 341 aa9.86□□□□□ -0.83
CLK3-208ENST00000562626 UPK3BL1B0FP48 263 aa9.86□□□□□ -0.83
CLK3-208ENST00000562626 UPK3BL2E5RIL1 263 aa9.86□□□□□ -0.83
CLK3-208ENST00000562626 PGRMC1O00264 195 aaKnown RBP9.86□□□□□ -0.83
CLK3-208ENST00000562626 PMPCBO75439 489 aa9.86□□□□□ -0.83
CLK3-208ENST00000562626 ALPIP09923 528 aa9.86□□□□□ -0.83
CLK3-208ENST00000562626 PRLRP16471 622 aa9.86□□□□□ -0.83
CLK3-208ENST00000562626 LHCGRP22888 699 aa9.86□□□□□ -0.83
CLK3-208ENST00000562626 SERPINA4P29622 427 aa9.86□□□□□ -0.83
CLK3-208ENST00000562626 MAT2AP31153 395 aaKnown RBP9.86□□□□□ -0.83
CLK3-208ENST00000562626 CHRNA4P43681 627 aa9.86□□□□□ -0.83
CLK3-208ENST00000562626 NEK3P51956 506 aa9.86□□□□□ -0.83
CLK3-208ENST00000562626 RAD51Q06609 339 aa9.86□□□□□ -0.83
CLK3-208ENST00000562626 BCL2L1Q07817 233 aa9.86□□□□□ -0.83
CLK3-208ENST00000562626 COL9A2Q14055 689 aaPredicted RBP9.86□□□□□ -0.83
CLK3-208ENST00000562626 GALNT3Q14435 633 aa9.86□□□□□ -0.83
CLK3-208ENST00000562626 CCDC6Q16204 474 aa9.86□□□□□ -0.83
CLK3-208ENST00000562626 PCSK7Q16549 785 aa9.86□□□□□ -0.83
CLK3-208ENST00000562626 CCNG2Q16589 344 aa9.86□□□□□ -0.83
CLK3-208ENST00000562626 CYP1B1Q16678 543 aa9.86□□□□□ -0.83
CLK3-208ENST00000562626 UGP2Q16851 508 aa9.86□□□□□ -0.83
CLK3-208ENST00000562626 SYCP2LQ5T4T6 812 aa9.86□□□□□ -0.83
CLK3-208ENST00000562626 RFLNAQ6ZTI6 216 aa9.86□□□□□ -0.83
CLK3-208ENST00000562626 MICALCLQ6ZW33 695 aa9.86□□□□□ -0.83
CLK3-208ENST00000562626 CEP68Q76N32 757 aa9.86□□□□□ -0.83
CLK3-208ENST00000562626 PID1Q7Z2X4 250 aa9.86□□□□□ -0.83
CLK3-208ENST00000562626 KDELC2Q7Z4H8 507 aa9.86□□□□□ -0.83
CLK3-208ENST00000562626 TSPAN33Q86UF1 283 aa9.86□□□□□ -0.83
CLK3-208ENST00000562626 BBS5Q8N3I7 341 aa9.86□□□□□ -0.83
CLK3-208ENST00000562626 C12orf50Q8NA57 414 aaPredicted RBP9.86□□□□□ -0.83
CLK3-208ENST00000562626 PDCD6IPQ8WUM4 868 aaKnown RBP9.86□□□□□ -0.83
CLK3-208ENST00000562626 BIRC7Q96CA5 298 aa9.86□□□□□ -0.83
CLK3-208ENST00000562626 RTP4Q96DX8 246 aa9.86□□□□□ -0.83
CLK3-208ENST00000562626 SPACA7Q96KW9 195 aa9.86□□□□□ -0.83
CLK3-208ENST00000562626 MRGPRX2Q96LB1 330 aa9.86□□□□□ -0.83
CLK3-208ENST00000562626 ZNF641Q96N77 438 aaPredicted RBP9.86□□□□□ -0.83
CLK3-208ENST00000562626 SPATA13Q96N96 652 aa9.86□□□□□ -0.83
CLK3-208ENST00000562626 WRAP53Q9BUR4 548 aaKnown RBP9.86□□□□□ -0.83
CLK3-208ENST00000562626 BTBD1Q9H0C5 482 aa9.86□□□□□ -0.83
CLK3-208ENST00000562626 GBA3Q9H227 469 aa9.86□□□□□ -0.83
CLK3-208ENST00000562626 SMOC1Q9H4F8 434 aa9.86□□□□□ -0.83
CLK3-208ENST00000562626 CAAP1Q9H8G2 361 aa9.86□□□□□ -0.83
CLK3-208ENST00000562626 PCDH12Q9NPG4 1184 aa9.86□□□□□ -0.83
CLK3-208ENST00000562626 AMACRQ9UHK6 382 aa9.86□□□□□ -0.83
CLK3-208ENST00000562626 SMG5Q9UPR3 1016 aaKnown RBP9.86□□□□□ -0.83
CLK3-208ENST00000562626 CA5BQ9Y2D0 317 aa9.86□□□□□ -0.83
CLK3-208ENST00000562626 COQ6Q9Y2Z9 468 aa9.86□□□□□ -0.83
CLK3-208ENST00000562626 PCDHB9Q9Y5E1 797 aa9.86□□□□□ -0.83
CLK3-208ENST00000562626 ASCC3Q8N3C0 2202 aaKnown RBP9.85□□□□□ -0.83
CLK3-208ENST00000562626 LOC107983988A0A1B0GUW6 1196 aaPredicted RBP9.85□□□□□ -0.83
CLK3-208ENST00000562626 A0A1W2PQU0 124 aa9.85□□□□□ -0.83
Retrieved 100 of 20,778 RNA–protein pairs in 41.9 ms