RNA–Protein interactions for RNA: ENST00000562540.1

DENND4A-205, Transcript of DENN domain containing 4A, humanhuman

TSL 2

Gene DENND4A, Length 629 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DENND4A-205ENST00000562540 CDH12P55289 794 aa3.24□□□□□ -1.89
DENND4A-205ENST00000562540 TLE2Q04725 743 aa3.24□□□□□ -1.89
DENND4A-205ENST00000562540 NAA25Q14CX7 972 aa3.24□□□□□ -1.89
DENND4A-205ENST00000562540 CCDC6Q16204 474 aa3.24□□□□□ -1.89
DENND4A-205ENST00000562540 MON1BQ7L1V2 547 aa3.24□□□□□ -1.89
DENND4A-205ENST00000562540 SMIM29Q86T20 159 aa3.24□□□□□ -1.89
DENND4A-205ENST00000562540 NAGSQ8N159 534 aa3.24□□□□□ -1.89
DENND4A-205ENST00000562540 NEXN-AS1Q8NBZ9 246 aa3.24□□□□□ -1.89
DENND4A-205ENST00000562540 SETD9Q8NE22 299 aa3.24□□□□□ -1.89
DENND4A-205ENST00000562540 DNAAF1Q8NEP3 725 aa3.24□□□□□ -1.89
DENND4A-205ENST00000562540 RFWD2Q8NHY2 731 aa3.24□□□□□ -1.89
DENND4A-205ENST00000562540 HDAC7Q8WUI4 952 aa3.24□□□□□ -1.89
DENND4A-205ENST00000562540 CNOT9Q92600 299 aaKnown RBP3.24□□□□□ -1.89
DENND4A-205ENST00000562540 ZDHHC7Q9NXF8 308 aa3.24□□□□□ -1.89
DENND4A-205ENST00000562540 GRHL1Q9NZI5 618 aa3.24□□□□□ -1.89
DENND4A-205ENST00000562540 CDH22Q9UJ99 828 aa3.24□□□□□ -1.89
DENND4A-205ENST00000562540 HSF4Q9ULV5 492 aa3.24□□□□□ -1.89
DENND4A-205ENST00000562540 WDR81Q562E7 1941 aa3.24□□□□□ -1.89
DENND4A-205ENST00000562540 IGLV5-37A0A075B6J1 123 aa3.23□□□□□ -1.89
DENND4A-205ENST00000562540 CCDC196A0A1B0GTZ2 297 aa3.23□□□□□ -1.89
DENND4A-205ENST00000562540 C17orf102A2RUQ5 167 aa3.23□□□□□ -1.89
DENND4A-205ENST00000562540 SH2D7A6NKC9 451 aaPredicted RBP3.23□□□□□ -1.89
DENND4A-205ENST00000562540 CLGNO14967 610 aa3.23□□□□□ -1.89
DENND4A-205ENST00000562540 PER2O15055 1255 aa3.23□□□□□ -1.89
DENND4A-205ENST00000562540 RNMTO43148 476 aaKnown RBP3.23□□□□□ -1.89
DENND4A-205ENST00000562540 KIF1CO43896 1103 aaKnown RBP3.23□□□□□ -1.89
DENND4A-205ENST00000562540 ADAP00813 363 aa3.23□□□□□ -1.89
DENND4A-205ENST00000562540 CHRM4P08173 479 aa3.23□□□□□ -1.89
DENND4A-205ENST00000562540 HNRNPA1P09651 372 aaKnown RBP eCLIP3.23□□□□□ -1.89
DENND4A-205ENST00000562540 XBP1P17861 261 aa3.23□□□□□ -1.89
DENND4A-205ENST00000562540 CD72P21854 359 aa3.23□□□□□ -1.89
DENND4A-205ENST00000562540 ANOS1P23352 680 aa3.23□□□□□ -1.89
DENND4A-205ENST00000562540 RFC1P35251 1148 aaPredicted RBP3.23□□□□□ -1.89
DENND4A-205ENST00000562540 GPD2P43304 727 aa3.23□□□□□ -1.89
DENND4A-205ENST00000562540 VAMP2P63027 116 aa3.23□□□□□ -1.89
DENND4A-205ENST00000562540 KHDRBS1Q07666 443 aaKnown RBP eCLIP3.23□□□□□ -1.89
DENND4A-205ENST00000562540 ARL16Q0P5N6 197 aa3.23□□□□□ -1.89
DENND4A-205ENST00000562540 SYTL3Q4VX76 610 aa3.23□□□□□ -1.89
DENND4A-205ENST00000562540 WDR45BQ5MNZ6 344 aa3.23□□□□□ -1.89
DENND4A-205ENST00000562540 LCE3CQ5T5A8 94 aa3.23□□□□□ -1.89
DENND4A-205ENST00000562540 C9orf139Q6ZV77 190 aa3.23□□□□□ -1.89
DENND4A-205ENST00000562540 LRRC8DQ7L1W4 858 aa3.23□□□□□ -1.89
DENND4A-205ENST00000562540 ADGRG6Q86SQ4 1221 aa3.23□□□□□ -1.89
DENND4A-205ENST00000562540 LSM14AQ8ND56 463 aaKnown RBP3.23□□□□□ -1.89
DENND4A-205ENST00000562540 NOC3LQ8WTT2 800 aaKnown RBP3.23□□□□□ -1.89
DENND4A-205ENST00000562540 RAB40AQ8WXH6 277 aa3.23□□□□□ -1.89
DENND4A-205ENST00000562540 HSPH1Q92598 858 aa3.23□□□□□ -1.89
DENND4A-205ENST00000562540 TXNDC15Q96J42 360 aa3.23□□□□□ -1.89
DENND4A-205ENST00000562540 MAELQ96JY0 434 aaKnown RBP3.23□□□□□ -1.89
DENND4A-205ENST00000562540 LMAN2LQ9H0V9 348 aa3.23□□□□□ -1.89
DENND4A-205ENST00000562540 TAOK3Q9H2K8 898 aa3.23□□□□□ -1.89
DENND4A-205ENST00000562540 CXorf56Q9H5V9 222 aa3.23□□□□□ -1.89
DENND4A-205ENST00000562540 EPHX3Q9H6B9 360 aa3.23□□□□□ -1.89
DENND4A-205ENST00000562540 GAREM1Q9H706 876 aa3.23□□□□□ -1.89
DENND4A-205ENST00000562540 TMEM160Q9NX00 188 aa3.23□□□□□ -1.89
DENND4A-205ENST00000562540 IFT80Q9P2H3 777 aaPredicted RBP3.23□□□□□ -1.89
DENND4A-205ENST00000562540 HDAC6Q9UBN7 1215 aa3.23□□□□□ -1.89
DENND4A-205ENST00000562540 CNPY2Q9Y2B0 182 aa3.23□□□□□ -1.89
DENND4A-205ENST00000562540 MST1RQ04912 1400 aa3.22□□□□□ -1.89
DENND4A-205ENST00000562540 CCDC189A1A4V9 331 aa3.22□□□□□ -1.89
DENND4A-205ENST00000562540 TARSL2A2RTX5 802 aaKnown RBP3.22□□□□□ -1.89
DENND4A-205ENST00000562540 FAM90A7PA6NKC0 464 aa3.22□□□□□ -1.89
DENND4A-205ENST00000562540 FAM90A22PA8MWA6 464 aa3.22□□□□□ -1.89
DENND4A-205ENST00000562540 FAM90A12PA8MX19 464 aa3.22□□□□□ -1.89
DENND4A-205ENST00000562540 FAM90A23PA8MXZ1 464 aa3.22□□□□□ -1.89
DENND4A-205ENST00000562540 PRAC2D3DTV9 90 aa3.22□□□□□ -1.89
DENND4A-205ENST00000562540 HOXC11O43248 304 aaPredicted RBP3.22□□□□□ -1.89
DENND4A-205ENST00000562540 XPNPEP2O43895 674 aa3.22□□□□□ -1.89
DENND4A-205ENST00000562540 CEP104O60308 925 aa3.22□□□□□ -1.89
DENND4A-205ENST00000562540 ZG16O60844 167 aa3.22□□□□□ -1.89
DENND4A-205ENST00000562540 GUCY1B2O75343 617 aa3.22□□□□□ -1.89
DENND4A-205ENST00000562540 TBX6O95947 436 aaPredicted RBP3.22□□□□□ -1.89
DENND4A-205ENST00000562540 SERPINC1P01008 464 aa3.22□□□□□ -1.89
DENND4A-205ENST00000562540 MMP3P08254 477 aa3.22□□□□□ -1.89
DENND4A-205ENST00000562540 DPP6P42658 865 aa3.22□□□□□ -1.89
DENND4A-205ENST00000562540 MYBPHQ13203 477 aa3.22□□□□□ -1.89
DENND4A-205ENST00000562540 TDGQ13569 410 aa3.22□□□□□ -1.89
DENND4A-205ENST00000562540 RPE65Q16518 533 aa3.22□□□□□ -1.89
DENND4A-205ENST00000562540 SLC18A3Q16572 532 aa3.22□□□□□ -1.89
DENND4A-205ENST00000562540 NFIL3Q16649 462 aa3.22□□□□□ -1.89
DENND4A-205ENST00000562540 ME3Q16798 604 aa3.22□□□□□ -1.89
DENND4A-205ENST00000562540 ALFQ53S48 1182 aa3.22□□□□□ -1.89
DENND4A-205ENST00000562540 TBC1D9BQ66K14 1250 aa3.22□□□□□ -1.89
DENND4A-205ENST00000562540 SLC22A25Q6T423 547 aa3.22□□□□□ -1.89
DENND4A-205ENST00000562540 SERPINA11Q86U17 422 aa3.22□□□□□ -1.89
DENND4A-205ENST00000562540 MON1AQ86VX9 555 aa3.22□□□□□ -1.89
DENND4A-205ENST00000562540 TMC8Q8IU68 726 aa3.22□□□□□ -1.89
DENND4A-205ENST00000562540 TMEM163Q8TC26 289 aa3.22□□□□□ -1.89
DENND4A-205ENST00000562540 ATOH1Q92858 354 aaPredicted RBP3.22□□□□□ -1.89
DENND4A-205ENST00000562540 BICD1Q96G01 975 aa3.22□□□□□ -1.89
DENND4A-205ENST00000562540 EYA3Q99504 573 aa3.22□□□□□ -1.89
DENND4A-205ENST00000562540 ATP8A2Q9NTI2 1148 aa3.22□□□□□ -1.89
DENND4A-205ENST00000562540 GGA3Q9NZ52 723 aa3.22□□□□□ -1.89
DENND4A-205ENST00000562540 CNOT7Q9UIV1 285 aaKnown RBP3.22□□□□□ -1.89
DENND4A-205ENST00000562540 SLC13A4Q9UKG4 626 aa3.22□□□□□ -1.89
DENND4A-205ENST00000562540 GJD2Q9UKL4 321 aa3.22□□□□□ -1.89
DENND4A-205ENST00000562540 TBX20Q9UMR3 447 aa3.22□□□□□ -1.89
DENND4A-205ENST00000562540 A0A096LPK6 155 aa3.21□□□□□ -1.9
DENND4A-205ENST00000562540 A0A1B0GVY2 172 aa3.21□□□□□ -1.9
DENND4A-205ENST00000562540 DDTLA6NHG4 134 aaPredicted RBP3.21□□□□□ -1.9
Retrieved 100 of 20,778 RNA–protein pairs in 22.5 ms