RNA–Protein interactions for RNA: ENST00000561947.5

SMG1-205, Transcript of SMG1, nonsense mediated mRNA decay associated PI3K related kinase, humanhuman

TSL 5

Gene SMG1, Length 2,664 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMG1-205ENST00000561947 ZNF789Q5FWF6 425 aa9.88□□□□□ -0.83
SMG1-205ENST00000561947 TPGS2Q68CL5 300 aa9.88□□□□□ -0.83
SMG1-205ENST00000561947 IL31Q6EBC2 164 aa9.88□□□□□ -0.83
SMG1-205ENST00000561947 TMPRSS6Q8IU80 811 aa9.88□□□□□ -0.83
SMG1-205ENST00000561947 LMNTD2Q8IXW0 634 aa9.88□□□□□ -0.83
SMG1-205ENST00000561947 TDRD5Q8NAT2 981 aaKnown RBP9.88□□□□□ -0.83
SMG1-205ENST00000561947 OR52K2Q8NGK3 314 aa9.88□□□□□ -0.83
SMG1-205ENST00000561947 ZNF461Q8TAF7 563 aa9.88□□□□□ -0.83
SMG1-205ENST00000561947 MCUR1Q96AQ8 359 aa9.88□□□□□ -0.83
SMG1-205ENST00000561947 TOX2Q96NM4 488 aa9.88□□□□□ -0.83
SMG1-205ENST00000561947 MGME1Q9BQP7 344 aa9.88□□□□□ -0.83
SMG1-205ENST00000561947 DRC3Q9H069 523 aa9.88□□□□□ -0.83
SMG1-205ENST00000561947 MMADHCQ9H3L0 296 aaPredicted RBP9.88□□□□□ -0.83
SMG1-205ENST00000561947 DENND2DQ9H6A0 471 aaPredicted RBP9.88□□□□□ -0.83
SMG1-205ENST00000561947 CYP4F11Q9HBI6 524 aa9.88□□□□□ -0.83
SMG1-205ENST00000561947 YIPF1Q9Y548 306 aa9.88□□□□□ -0.83
SMG1-205ENST00000561947 PLXNA4Q9HCM2 1894 aa9.88□□□□□ -0.83
SMG1-205ENST00000561947 KDELR3O43731 214 aa9.88□□□□□ -0.83
SMG1-205ENST00000561947 DIAPH2O60879 1101 aa9.88□□□□□ -0.83
SMG1-205ENST00000561947 CLDN11O75508 207 aa9.88□□□□□ -0.83
SMG1-205ENST00000561947 KLKB1P03952 638 aa9.88□□□□□ -0.83
SMG1-205ENST00000561947 SERPINF2P08697 491 aa9.88□□□□□ -0.83
SMG1-205ENST00000561947 EZRP15311 586 aaKnown RBP9.88□□□□□ -0.83
SMG1-205ENST00000561947 GM2AP17900 193 aa9.88□□□□□ -0.83
SMG1-205ENST00000561947 CORO1AP31146 461 aaKnown RBP9.88□□□□□ -0.83
SMG1-205ENST00000561947 PRAMEP78395 509 aa9.88□□□□□ -0.83
SMG1-205ENST00000561947 DSG1Q02413 1049 aa9.88□□□□□ -0.83
SMG1-205ENST00000561947 KDSRQ06136 332 aa9.88□□□□□ -0.83
SMG1-205ENST00000561947 PLD1Q13393 1074 aa9.88□□□□□ -0.83
SMG1-205ENST00000561947 LAMB3Q13751 1172 aa9.88□□□□□ -0.83
SMG1-205ENST00000561947 SLC14A2Q15849 920 aa9.88□□□□□ -0.83
SMG1-205ENST00000561947 CFAP157Q5JU67 520 aa9.88□□□□□ -0.83
SMG1-205ENST00000561947 VWA5B1Q5TIE3 1220 aa9.88□□□□□ -0.83
SMG1-205ENST00000561947 EPGNQ6UW88 154 aa9.88□□□□□ -0.83
SMG1-205ENST00000561947 PTAR1Q7Z6K3 402 aaPredicted RBP9.88□□□□□ -0.83
SMG1-205ENST00000561947 CILP2Q8IUL8 1156 aa9.88□□□□□ -0.83
SMG1-205ENST00000561947 OR6P1Q8NGX9 317 aa9.88□□□□□ -0.83
SMG1-205ENST00000561947 PEX13Q92968 403 aa9.88□□□□□ -0.83
SMG1-205ENST00000561947 HDAC10Q969S8 669 aa9.88□□□□□ -0.83
SMG1-205ENST00000561947 NDNQ99608 321 aa9.88□□□□□ -0.83
SMG1-205ENST00000561947 OLFM1Q99784 485 aa9.88□□□□□ -0.83
SMG1-205ENST00000561947 MRPL57Q9BQC6 102 aaKnown RBP9.88□□□□□ -0.83
SMG1-205ENST00000561947 HERC2P3Q9BVR0 1158 aa9.88□□□□□ -0.83
SMG1-205ENST00000561947 ILKAPQ9H0C8 392 aaPredicted RBP9.88□□□□□ -0.83
SMG1-205ENST00000561947 MRPL46Q9H2W6 279 aaKnown RBP9.88□□□□□ -0.83
SMG1-205ENST00000561947 RNPEPL1Q9HAU8 725 aa9.88□□□□□ -0.83
SMG1-205ENST00000561947 UBA2Q9UBT2 640 aaPredicted RBP9.88□□□□□ -0.83
SMG1-205ENST00000561947 SEPT3Q9UH03 358 aa9.88□□□□□ -0.83
SMG1-205ENST00000561947 RAP2CQ9Y3L5 183 aa9.88□□□□□ -0.83
SMG1-205ENST00000561947 KCTD3Q9Y597 815 aa9.88□□□□□ -0.83
SMG1-205ENST00000561947 DLX3O60479 287 aa9.87□□□□□ -0.83
SMG1-205ENST00000561947 MPSTP25325 297 aa9.87□□□□□ -0.83
SMG1-205ENST00000561947 ALDH1A3P47895 512 aa9.87□□□□□ -0.83
SMG1-205ENST00000561947 HK2P52789 917 aa9.87□□□□□ -0.83
SMG1-205ENST00000561947 OXCT1P55809 520 aa9.87□□□□□ -0.83
SMG1-205ENST00000561947 ACVR1Q04771 509 aa9.87□□□□□ -0.83
SMG1-205ENST00000561947 ASPHQ12797 758 aa9.87□□□□□ -0.83
SMG1-205ENST00000561947 GALNT3Q14435 633 aa9.87□□□□□ -0.83
SMG1-205ENST00000561947 SPOUT1Q5T280 376 aaKnown RBP9.87□□□□□ -0.83
SMG1-205ENST00000561947 CHST9Q7L1S5 443 aa9.87□□□□□ -0.83
SMG1-205ENST00000561947 ARHGAP24Q8N264 748 aa9.87□□□□□ -0.83
SMG1-205ENST00000561947 RBM15BQ8NDT2 890 aaKnown RBP9.87□□□□□ -0.83
SMG1-205ENST00000561947 HEXDCQ8WVB3 486 aa9.87□□□□□ -0.83
SMG1-205ENST00000561947 TSPAN17Q96FV3 270 aa9.87□□□□□ -0.83
SMG1-205ENST00000561947 TRMT2BQ96GJ1 504 aaKnown RBP9.87□□□□□ -0.83
SMG1-205ENST00000561947 PSKH2Q96QS6 385 aa9.87□□□□□ -0.83
SMG1-205ENST00000561947 SPON2Q9BUD6 331 aa9.87□□□□□ -0.83
SMG1-205ENST00000561947 KLF16Q9BXK1 252 aaPredicted RBP9.87□□□□□ -0.83
SMG1-205ENST00000561947 COG4Q9H9E3 785 aa9.87□□□□□ -0.83
SMG1-205ENST00000561947 IGSF5Q9NSI5 407 aa9.87□□□□□ -0.83
SMG1-205ENST00000561947 IGF2BP1Q9NZI8 577 aaKnown RBP eCLIP9.87□□□□□ -0.83
SMG1-205ENST00000561947 NOP53Q9NZM5 478 aaKnown RBP9.87□□□□□ -0.83
SMG1-205ENST00000561947 ACTL7AQ9Y615 435 aa9.87□□□□□ -0.83
SMG1-205ENST00000561947 ILVBLA1L0T0 632 aa9.87□□□□□ -0.83
SMG1-205ENST00000561947 CCL22O00626 93 aa9.87□□□□□ -0.83
SMG1-205ENST00000561947 NDST3O95803 873 aa9.87□□□□□ -0.83
SMG1-205ENST00000561947 CHRNGP07510 517 aa9.87□□□□□ -0.83
SMG1-205ENST00000561947 RHOCP08134 193 aa9.87□□□□□ -0.83
SMG1-205ENST00000561947 MNX1P50219 401 aaPredicted RBP9.87□□□□□ -0.83
SMG1-205ENST00000561947 SGSHP51688 502 aa9.87□□□□□ -0.83
SMG1-205ENST00000561947 PRKAA1Q13131 559 aa9.87□□□□□ -0.83
SMG1-205ENST00000561947 TAF12Q16514 161 aa9.87□□□□□ -0.83
SMG1-205ENST00000561947 HECTD2Q5U5R9 776 aa9.87□□□□□ -0.83
SMG1-205ENST00000561947 TMC7Q7Z402 723 aa9.87□□□□□ -0.83
SMG1-205ENST00000561947 SLC39A11Q8N1S5 342 aa9.87□□□□□ -0.83
SMG1-205ENST00000561947 SPATA6LQ8N4H0 392 aa9.87□□□□□ -0.83
SMG1-205ENST00000561947 FBXO27Q8NI29 283 aa9.87□□□□□ -0.83
SMG1-205ENST00000561947 TTC8Q8TAM2 541 aa9.87□□□□□ -0.83
SMG1-205ENST00000561947 BLOC1S5Q8TDH9 187 aa9.87□□□□□ -0.83
SMG1-205ENST00000561947 VWCEQ96DN2 955 aa9.87□□□□□ -0.83
SMG1-205ENST00000561947 ZNF558Q96NG5 402 aa9.87□□□□□ -0.83
SMG1-205ENST00000561947 TRIB3Q96RU7 358 aa9.87□□□□□ -0.83
SMG1-205ENST00000561947 CINPQ9BW66 212 aaPredicted RBP9.87□□□□□ -0.83
SMG1-205ENST00000561947 EBF2Q9HAK2 575 aa9.87□□□□□ -0.83
SMG1-205ENST00000561947 GKN1Q9NS71 199 aa9.87□□□□□ -0.83
SMG1-205ENST00000561947 MARCH4Q9P2E8 410 aaPredicted RBP9.87□□□□□ -0.83
SMG1-205ENST00000561947 TBX21Q9UL17 535 aa9.87□□□□□ -0.83
SMG1-205ENST00000561947 EPB41L3Q9Y2J2 1087 aaPredicted RBP9.87□□□□□ -0.83
SMG1-205ENST00000561947 OBSL1O75147 1896 aa9.86□□□□□ -0.83
SMG1-205ENST00000561947 BPTFQ12830 3046 aa9.86□□□□□ -0.83
Retrieved 100 of 20,778 RNA–protein pairs in 59.7 ms