RNA–Protein interactions for RNA: ENST00000561817.5

CAPN3-210, Transcript of calpain 3, humanhuman

TSL 1 (best) BASIC

Gene CAPN3, Length 915 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CAPN3-210ENST00000561817 NAB1Q13506 487 aa6.61□□□□□ -1.35
CAPN3-210ENST00000561817 PRPSAP1Q14558 356 aa6.61□□□□□ -1.35
CAPN3-210ENST00000561817 LBRQ14739 615 aaKnown RBP6.61□□□□□ -1.35
CAPN3-210ENST00000561817 CYTH1Q15438 398 aa6.61□□□□□ -1.35
CAPN3-210ENST00000561817 SLC1A5Q15758 541 aa6.61□□□□□ -1.35
CAPN3-210ENST00000561817 SLC14A2Q15849 920 aa6.61□□□□□ -1.35
CAPN3-210ENST00000561817 TAF12Q16514 161 aa6.61□□□□□ -1.35
CAPN3-210ENST00000561817 LRIT3Q3SXY7 679 aa6.61□□□□□ -1.35
CAPN3-210ENST00000561817 FSCBQ5H9T9 825 aa6.61□□□□□ -1.35
CAPN3-210ENST00000561817 PRSS36Q5K4E3 855 aa6.61□□□□□ -1.35
CAPN3-210ENST00000561817 STXBP5Q5T5C0 1151 aa6.61□□□□□ -1.35
CAPN3-210ENST00000561817 MARC1Q5VT66 337 aa6.61□□□□□ -1.35
CAPN3-210ENST00000561817 NAPEPLDQ6IQ20 393 aa6.61□□□□□ -1.35
CAPN3-210ENST00000561817 PKN3Q6P5Z2 889 aa6.61□□□□□ -1.35
CAPN3-210ENST00000561817 FOXR1Q6PIV2 292 aa6.61□□□□□ -1.35
CAPN3-210ENST00000561817 CES3Q6UWW8 571 aa6.61□□□□□ -1.35
CAPN3-210ENST00000561817 ZNF783Q6ZMS7 281 aa6.61□□□□□ -1.35
CAPN3-210ENST00000561817 GET4Q7L5D6 327 aaPredicted RBP6.61□□□□□ -1.35
CAPN3-210ENST00000561817 LINC00523Q86TU6 105 aa6.61□□□□□ -1.35
CAPN3-210ENST00000561817 SETD3Q86TU7 594 aaPredicted RBP6.61□□□□□ -1.35
CAPN3-210ENST00000561817 C4orf33Q8N1A6 199 aa6.61□□□□□ -1.35
CAPN3-210ENST00000561817 DEPDC4Q8N2C3 294 aa6.61□□□□□ -1.35
CAPN3-210ENST00000561817 CPXM2Q8N436 756 aa6.61□□□□□ -1.35
CAPN3-210ENST00000561817 PPM1NQ8N819 430 aa6.61□□□□□ -1.35
CAPN3-210ENST00000561817 WFDC5Q8TCV5 224 aa6.61□□□□□ -1.35
CAPN3-210ENST00000561817 CKAP2Q8WWK9 683 aa6.61□□□□□ -1.35
CAPN3-210ENST00000561817 ATP2A3Q93084 1043 aa6.61□□□□□ -1.35
CAPN3-210ENST00000561817 ISL2Q96A47 359 aa6.61□□□□□ -1.35
CAPN3-210ENST00000561817 VOPP1Q96AW1 172 aa6.61□□□□□ -1.35
CAPN3-210ENST00000561817 ZNF707Q96C28 371 aaPredicted RBP6.61□□□□□ -1.35
CAPN3-210ENST00000561817 TCEAL4Q96EI5 215 aa6.61□□□□□ -1.35
CAPN3-210ENST00000561817 SCARF2Q96GP6 870 aaPredicted RBP6.61□□□□□ -1.35
CAPN3-210ENST00000561817 ZNF778Q96MU6 729 aa6.61□□□□□ -1.35
CAPN3-210ENST00000561817 PPP1R2P1Q96PQ5 205 aa6.61□□□□□ -1.35
CAPN3-210ENST00000561817 TRIB3Q96RU7 358 aa6.61□□□□□ -1.35
CAPN3-210ENST00000561817 CCT8L2Q96SF2 557 aa6.61□□□□□ -1.35
CAPN3-210ENST00000561817 DDX50Q9BQ39 737 aaKnown RBP6.61□□□□□ -1.35
CAPN3-210ENST00000561817 SELENOSQ9BQE4 189 aa6.61□□□□□ -1.35
CAPN3-210ENST00000561817 MGME1Q9BQP7 344 aa6.61□□□□□ -1.35
CAPN3-210ENST00000561817 FICDQ9BVA6 458 aa6.61□□□□□ -1.35
CAPN3-210ENST00000561817 IL22Q9GZX6 179 aa6.61□□□□□ -1.35
CAPN3-210ENST00000561817 NACA2Q9H009 215 aa6.61□□□□□ -1.35
CAPN3-210ENST00000561817 C12orf49Q9H741 205 aa6.61□□□□□ -1.35
CAPN3-210ENST00000561817 SP110Q9HB58 689 aa6.61□□□□□ -1.35
CAPN3-210ENST00000561817 NT5MQ9NPB1 228 aa6.61□□□□□ -1.35
CAPN3-210ENST00000561817 ENTPD7Q9NQZ7 604 aa6.61□□□□□ -1.35
CAPN3-210ENST00000561817 TLR9Q9NR96 1032 aa6.61□□□□□ -1.35
CAPN3-210ENST00000561817 VPS45Q9NRW7 570 aa6.61□□□□□ -1.35
CAPN3-210ENST00000561817 TREX1Q9NSU2 369 aa6.61□□□□□ -1.35
CAPN3-210ENST00000561817 INTS9Q9NV88 658 aaKnown RBP6.61□□□□□ -1.35
CAPN3-210ENST00000561817 HCFC1R1Q9NWW0 138 aa6.61□□□□□ -1.35
CAPN3-210ENST00000561817 MKS1Q9NXB0 559 aa6.61□□□□□ -1.35
CAPN3-210ENST00000561817 SMPD4Q9NXE4 827 aa6.61□□□□□ -1.35
CAPN3-210ENST00000561817 BFARQ9NZS9 450 aa6.61□□□□□ -1.35
CAPN3-210ENST00000561817 GRID1Q9ULK0 1009 aa6.61□□□□□ -1.35
CAPN3-210ENST00000561817 ARHGAP26Q9UNA1 814 aa6.61□□□□□ -1.35
CAPN3-210ENST00000561817 SMG5Q9UPR3 1016 aaKnown RBP6.61□□□□□ -1.35
CAPN3-210ENST00000561817 RWDD3Q9Y3V2 267 aa6.61□□□□□ -1.35
CAPN3-210ENST00000561817 ACTL7AQ9Y615 435 aa6.61□□□□□ -1.35
CAPN3-210ENST00000561817 PSAT1Q9Y617 370 aa6.61□□□□□ -1.35
CAPN3-210ENST00000561817 DNMT3AQ9Y6K1 912 aaPredicted RBP6.61□□□□□ -1.35
CAPN3-210ENST00000561817 TRANK1O15050 2925 aa6.6□□□□□ -1.35
CAPN3-210ENST00000561817 TRAV19A0A0A6YYK7 116 aa6.6□□□□□ -1.35
CAPN3-210ENST00000561817 IQANK1A0A1B0GTG1 560 aa6.6□□□□□ -1.35
CAPN3-210ENST00000561817 A0A1W2PRU2 124 aa6.6□□□□□ -1.35
CAPN3-210ENST00000561817 GMNCA6NCL1 334 aa6.6□□□□□ -1.35
CAPN3-210ENST00000561817 TRIM49D1C9J1S8 452 aa6.6□□□□□ -1.35
CAPN3-210ENST00000561817 AP3B1O00203 1094 aa6.6□□□□□ -1.35
CAPN3-210ENST00000561817 LEFTY2O00292 366 aa6.6□□□□□ -1.35
CAPN3-210ENST00000561817 TIMM44O43615 452 aa6.6□□□□□ -1.35
CAPN3-210ENST00000561817 SPAG7O75391 227 aa6.6□□□□□ -1.35
CAPN3-210ENST00000561817 PMPCBO75439 489 aa6.6□□□□□ -1.35
CAPN3-210ENST00000561817 RFPL2O75678 378 aa6.6□□□□□ -1.35
CAPN3-210ENST00000561817 FAM107AO95990 144 aa6.6□□□□□ -1.35
CAPN3-210ENST00000561817 POLBP06746 335 aa6.6□□□□□ -1.35
CAPN3-210ENST00000561817 RHOCP08134 193 aa6.6□□□□□ -1.35
CAPN3-210ENST00000561817 INHBAP08476 426 aa6.6□□□□□ -1.35
CAPN3-210ENST00000561817 SNRPAP09012 282 aaKnown RBP6.6□□□□□ -1.35
CAPN3-210ENST00000561817 ERVK-10P10266 1014 aa6.6□□□□□ -1.35
CAPN3-210ENST00000561817 EPCAMP16422 314 aa6.6□□□□□ -1.35
CAPN3-210ENST00000561817 GJA1P17302 382 aa6.6□□□□□ -1.35
CAPN3-210ENST00000561817 KRT15P19012 456 aa6.6□□□□□ -1.35
CAPN3-210ENST00000561817 KRT4P19013 534 aa6.6□□□□□ -1.35
CAPN3-210ENST00000561817 PSMA3P25788 255 aa6.6□□□□□ -1.35
CAPN3-210ENST00000561817 NMBRP28336 390 aa6.6□□□□□ -1.35
CAPN3-210ENST00000561817 MZF1P28698 734 aaPredicted RBP6.6□□□□□ -1.35
CAPN3-210ENST00000561817 RPA3P35244 121 aaPredicted RBP6.6□□□□□ -1.35
CAPN3-210ENST00000561817 CD86P42081 329 aa6.6□□□□□ -1.35
CAPN3-210ENST00000561817 ETV4P43268 484 aa6.6□□□□□ -1.35
CAPN3-210ENST00000561817 CHRNA4P43681 627 aa6.6□□□□□ -1.35
CAPN3-210ENST00000561817 RGRP47804 291 aa6.6□□□□□ -1.35
CAPN3-210ENST00000561817 SERPINB9P50453 376 aa6.6□□□□□ -1.35
CAPN3-210ENST00000561817 MAXP61244 160 aa6.6□□□□□ -1.35
CAPN3-210ENST00000561817 RACK1P63244 317 aaKnown RBP6.6□□□□□ -1.35
CAPN3-210ENST00000561817 ARF5P84085 180 aa6.6□□□□□ -1.35
CAPN3-210ENST00000561817 KCNC3Q14003 757 aa6.6□□□□□ -1.35
CAPN3-210ENST00000561817 GAS6Q14393 721 aa6.6□□□□□ -1.35
CAPN3-210ENST00000561817 RFTN1Q14699 578 aaPredicted RBP6.6□□□□□ -1.35
CAPN3-210ENST00000561817 LRRC14Q15048 493 aa6.6□□□□□ -1.35
CAPN3-210ENST00000561817 OCLNQ16625 522 aa6.6□□□□□ -1.35
Retrieved 100 of 20,778 RNA–protein pairs in 20.8 ms