RNA–Protein interactions for RNA: ENST00000561680.5

CMTM4-203, Transcript of CKLF like MARVEL transmembrane domain containing 4, humanhuman

TSL 2

Gene CMTM4, Length 618 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CMTM4-203ENST00000561680 CDK18Q07002 472 aa12.77□□□□□ -0.37
CMTM4-203ENST00000561680 HLTFQ14527 1009 aaKnown RBP eCLIP12.77□□□□□ -0.37
CMTM4-203ENST00000561680 STARD3Q14849 445 aa12.77□□□□□ -0.37
CMTM4-203ENST00000561680 SLC1A5Q15758 541 aa12.77□□□□□ -0.37
CMTM4-203ENST00000561680 EOGTQ5NDL2 527 aa12.77□□□□□ -0.37
CMTM4-203ENST00000561680 DENND5AQ6IQ26 1287 aa12.77□□□□□ -0.37
CMTM4-203ENST00000561680 PKN3Q6P5Z2 889 aa12.77□□□□□ -0.37
CMTM4-203ENST00000561680 LRRC8BQ6P9F7 803 aa12.77□□□□□ -0.37
CMTM4-203ENST00000561680 RANBP10Q6VN20 620 aa12.77□□□□□ -0.37
CMTM4-203ENST00000561680 PPP1R21Q6ZMI0 780 aa12.77□□□□□ -0.37
CMTM4-203ENST00000561680 Q6ZS52 159 aa12.77□□□□□ -0.37
CMTM4-203ENST00000561680 DSG4Q86SJ6 1040 aa12.77□□□□□ -0.37
CMTM4-203ENST00000561680 ZCCHC9Q8N567 271 aaKnown RBP12.77□□□□□ -0.37
CMTM4-203ENST00000561680 TMIEQ8NEW7 156 aa12.77□□□□□ -0.37
CMTM4-203ENST00000561680 PJA1Q8NG27 643 aa12.77□□□□□ -0.37
CMTM4-203ENST00000561680 IFT81Q8WYA0 676 aa12.77□□□□□ -0.37
CMTM4-203ENST00000561680 IFT43Q96FT9 208 aa12.77□□□□□ -0.37
CMTM4-203ENST00000561680 SERPINB12Q96P63 405 aa12.77□□□□□ -0.37
CMTM4-203ENST00000561680 FAM129BQ96TA1 746 aa12.77□□□□□ -0.37
CMTM4-203ENST00000561680 PARD6BQ9BYG5 372 aa12.77□□□□□ -0.37
CMTM4-203ENST00000561680 FRMD8Q9BZ67 464 aaPredicted RBP12.77□□□□□ -0.37
CMTM4-203ENST00000561680 RSPH9Q9H1X1 276 aaPredicted RBP12.77□□□□□ -0.37
CMTM4-203ENST00000561680 SUV39H2Q9H5I1 410 aa12.77□□□□□ -0.37
CMTM4-203ENST00000561680 LMAN1LQ9HAT1 526 aa12.77□□□□□ -0.37
CMTM4-203ENST00000561680 ARNT2Q9HBZ2 717 aa12.77□□□□□ -0.37
CMTM4-203ENST00000561680 XAB2Q9HCS7 855 aaKnown RBP12.77□□□□□ -0.37
CMTM4-203ENST00000561680 CASS4Q9NQ75 786 aa12.77□□□□□ -0.37
CMTM4-203ENST00000561680 RAB21Q9UL25 225 aa12.77□□□□□ -0.37
CMTM4-203ENST00000561680 PPM1HQ9ULR3 514 aa12.77□□□□□ -0.37
CMTM4-203ENST00000561680 CHKBQ9Y259 395 aa12.77□□□□□ -0.37
CMTM4-203ENST00000561680 FAM170BA6NMN3 283 aa12.76□□□□□ -0.37
CMTM4-203ENST00000561680 GOLGA8MH3BSY2 632 aa12.76□□□□□ -0.37
CMTM4-203ENST00000561680 DCXO43602 365 aa12.76□□□□□ -0.37
CMTM4-203ENST00000561680 SYNCRIPO60506 623 aaKnown RBP12.76□□□□□ -0.37
CMTM4-203ENST00000561680 PPFIA2O75334 1257 aa12.76□□□□□ -0.37
CMTM4-203ENST00000561680 AGTP01019 485 aa12.76□□□□□ -0.37
CMTM4-203ENST00000561680 FGF1P05230 155 aa12.76□□□□□ -0.37
CMTM4-203ENST00000561680 TUBBP07437 444 aa12.76□□□□□ -0.37
CMTM4-203ENST00000561680 PDHA1P08559 390 aa12.76□□□□□ -0.37
CMTM4-203ENST00000561680 MYBL2P10244 700 aa12.76□□□□□ -0.37
CMTM4-203ENST00000561680 C7P10643 843 aa12.76□□□□□ -0.37
CMTM4-203ENST00000561680 MLNP12872 115 aa12.76□□□□□ -0.37
CMTM4-203ENST00000561680 COL9A1P20849 921 aa12.76□□□□□ -0.37
CMTM4-203ENST00000561680 MCM3P25205 808 aa12.76□□□□□ -0.37
CMTM4-203ENST00000561680 GRIA1P42261 906 aa12.76□□□□□ -0.37
CMTM4-203ENST00000561680 CHRNA4P43681 627 aa12.76□□□□□ -0.37
CMTM4-203ENST00000561680 TNNT3P45378 269 aaPredicted RBP12.76□□□□□ -0.37
CMTM4-203ENST00000561680 RPL26P61254 145 aaKnown RBP12.76□□□□□ -0.37
CMTM4-203ENST00000561680 CDH17Q12864 832 aa12.76□□□□□ -0.37
CMTM4-203ENST00000561680 ARSIQ5FYB1 569 aa12.76□□□□□ -0.37
CMTM4-203ENST00000561680 SIRPB2Q5JXA9 342 aa12.76□□□□□ -0.37
CMTM4-203ENST00000561680 ARMC12Q5T9G4 340 aa12.76□□□□□ -0.37
CMTM4-203ENST00000561680 KIAA1211LQ6NV74 962 aa12.76□□□□□ -0.37
CMTM4-203ENST00000561680 GDPD4Q6W3E5 623 aa12.76□□□□□ -0.37
CMTM4-203ENST00000561680 CAND1Q86VP6 1230 aaKnown RBP12.76□□□□□ -0.37
CMTM4-203ENST00000561680 ZSWIM9Q86XI8 627 aa12.76□□□□□ -0.37
CMTM4-203ENST00000561680 OR52K1Q8NGK4 314 aa12.76□□□□□ -0.37
CMTM4-203ENST00000561680 OR2T3Q8NH03 318 aa12.76□□□□□ -0.37
CMTM4-203ENST00000561680 PIP4K2CQ8TBX8 421 aa12.76□□□□□ -0.37
CMTM4-203ENST00000561680 EDAQ92838 391 aa12.76□□□□□ -0.37
CMTM4-203ENST00000561680 CLDN23Q96B33 292 aa12.76□□□□□ -0.37
CMTM4-203ENST00000561680 FMO2Q99518 471 aa12.76□□□□□ -0.37
CMTM4-203ENST00000561680 APOL2Q9BQE5 337 aa12.76□□□□□ -0.37
CMTM4-203ENST00000561680 FOXP3Q9BZS1 431 aa12.76□□□□□ -0.37
CMTM4-203ENST00000561680 PHACTR1Q9C0D0 580 aa12.76□□□□□ -0.37
CMTM4-203ENST00000561680 DKK3Q9UBP4 350 aa12.76□□□□□ -0.37
CMTM4-203ENST00000561680 SARDHQ9UL12 918 aa12.76□□□□□ -0.37
CMTM4-203ENST00000561680 NFU1Q9UMS0 254 aa12.76□□□□□ -0.37
CMTM4-203ENST00000561680 RPL26L1Q9UNX3 145 aaKnown RBP12.76□□□□□ -0.37
CMTM4-203ENST00000561680 BDP1A6H8Y1 2624 aa12.75□□□□□ -0.37
CMTM4-203ENST00000561680 A0A1W2PQ67 120 aa12.75□□□□□ -0.37
CMTM4-203ENST00000561680 C1QTNF3-AMACRE9PGA6 284 aa12.75□□□□□ -0.37
CMTM4-203ENST00000561680 AP3B1O00203 1094 aa12.75□□□□□ -0.37
CMTM4-203ENST00000561680 CPP00450 1065 aa12.75□□□□□ -0.37
CMTM4-203ENST00000561680 VCANP13611 3396 aa12.75□□□□□ -0.37
CMTM4-203ENST00000561680 ITGB7P26010 798 aa12.75□□□□□ -0.37
CMTM4-203ENST00000561680 RPS9P46781 194 aaKnown RBP12.75□□□□□ -0.37
CMTM4-203ENST00000561680 GRIA4P48058 902 aa12.75□□□□□ -0.37
CMTM4-203ENST00000561680 PSMD8P48556 350 aa12.75□□□□□ -0.37
CMTM4-203ENST00000561680 COPAP53621 1224 aa12.75□□□□□ -0.37
CMTM4-203ENST00000561680 CBLBQ13191 982 aa12.75□□□□□ -0.37
CMTM4-203ENST00000561680 GAS6Q14393 721 aa12.75□□□□□ -0.37
CMTM4-203ENST00000561680 GALNT3Q14435 633 aa12.75□□□□□ -0.37
CMTM4-203ENST00000561680 HIF1AQ16665 826 aa12.75□□□□□ -0.37
CMTM4-203ENST00000561680 ZNF805Q5CZA5 627 aa12.75□□□□□ -0.37
CMTM4-203ENST00000561680 ZNF776Q68DI1 518 aaPredicted RBP12.75□□□□□ -0.37
CMTM4-203ENST00000561680 BRAT1Q6PJG6 821 aa12.75□□□□□ -0.37
CMTM4-203ENST00000561680 CCNI2Q6ZMN8 369 aaPredicted RBP12.75□□□□□ -0.37
CMTM4-203ENST00000561680 SYT13Q7L8C5 426 aa12.75□□□□□ -0.37
CMTM4-203ENST00000561680 KDELC2Q7Z4H8 507 aa12.75□□□□□ -0.37
CMTM4-203ENST00000561680 GSPT2Q8IYD1 628 aaKnown RBP12.75□□□□□ -0.37
CMTM4-203ENST00000561680 LPCAT1Q8NF37 534 aa12.75□□□□□ -0.37
CMTM4-203ENST00000561680 HCAR2Q8TDS4 363 aa12.75□□□□□ -0.37
CMTM4-203ENST00000561680 PDCD6IPQ8WUM4 868 aaKnown RBP12.75□□□□□ -0.37
CMTM4-203ENST00000561680 PIH1D2Q8WWB5 315 aa12.75□□□□□ -0.37
CMTM4-203ENST00000561680 DGCR8Q8WYQ5 773 aaKnown RBP eCLIP12.75□□□□□ -0.37
CMTM4-203ENST00000561680 TTC28Q96AY4 2481 aa12.75□□□□□ -0.37
CMTM4-203ENST00000561680 PWWP2AQ96N64 755 aa12.75□□□□□ -0.37
CMTM4-203ENST00000561680 KLHL32Q96NJ5 620 aa12.75□□□□□ -0.37
CMTM4-203ENST00000561680 ADGRE3Q9BY15 652 aa12.75□□□□□ -0.37
Retrieved 100 of 20,778 RNA–protein pairs in 48.2 ms