RNA–Protein interactions for RNA: ENST00000561065.1

LMX1B-204, Transcript of LIM homeobox transcription factor 1 beta, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene LMX1B, Length 1,300 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LMX1B-204ENST00000561065 LENG8Q96PV6 779 aaPredicted RBP16.14■□□□□ 0.17
LMX1B-204ENST00000561065 CCDC86Q9H6F5 360 aaKnown RBP16.14■□□□□ 0.17
LMX1B-204ENST00000561065 CWC15Q9P013 229 aaKnown RBP16.14■□□□□ 0.17
LMX1B-204ENST00000561065 UVRAGQ9P2Y5 699 aa16.14■□□□□ 0.17
LMX1B-204ENST00000561065 U3KQA8 63 aa16.14■□□□□ 0.17
LMX1B-204ENST00000561065 A0A087X0T9 212 aa16.13■□□□□ 0.17
LMX1B-204ENST00000561065 SPTY2D1-AS1A0A0U1RR47 76 aa16.13■□□□□ 0.17
LMX1B-204ENST00000561065 TRABD2BA6NFA1 517 aa16.13■□□□□ 0.17
LMX1B-204ENST00000561065 AKR1B15C9JRZ8 316 aaPredicted RBP16.13■□□□□ 0.17
LMX1B-204ENST00000561065 NEMP1O14524 444 aa16.13■□□□□ 0.17
LMX1B-204ENST00000561065 MUSKO15146 869 aa16.13■□□□□ 0.17
LMX1B-204ENST00000561065 BUB1BO60566 1050 aaPredicted RBP16.13■□□□□ 0.17
LMX1B-204ENST00000561065 MMP20O60882 483 aa16.13■□□□□ 0.17
LMX1B-204ENST00000561065 NEBLO76041 1014 aa16.13■□□□□ 0.17
LMX1B-204ENST00000561065 FAM228BP0C875 321 aa16.13■□□□□ 0.17
LMX1B-204ENST00000561065 MYF5P13349 255 aa16.13■□□□□ 0.17
LMX1B-204ENST00000561065 NME1P15531 152 aaKnown RBP16.13■□□□□ 0.17
LMX1B-204ENST00000561065 CKMT2P17540 419 aa16.13■□□□□ 0.17
LMX1B-204ENST00000561065 ACP1P24666 158 aa16.13■□□□□ 0.17
LMX1B-204ENST00000561065 EIF4A3P38919 411 aaKnown RBP16.13■□□□□ 0.17
LMX1B-204ENST00000561065 RABIFP47224 123 aa16.13■□□□□ 0.17
LMX1B-204ENST00000561065 ZNF211Q13398 564 aaPredicted RBP16.13■□□□□ 0.17
LMX1B-204ENST00000561065 PDE1CQ14123 709 aaPredicted RBP16.13■□□□□ 0.17
LMX1B-204ENST00000561065 TTC7BQ86TV6 843 aa16.13■□□□□ 0.17
LMX1B-204ENST00000561065 ZSCAN30Q86W11 494 aa16.13■□□□□ 0.17
LMX1B-204ENST00000561065 PARGQ86W56 976 aa16.13■□□□□ 0.17
LMX1B-204ENST00000561065 TMPRSS12Q86WS5 348 aa16.13■□□□□ 0.17
LMX1B-204ENST00000561065 TP53I13Q8NBR0 393 aaPredicted RBP16.13■□□□□ 0.17
LMX1B-204ENST00000561065 TSEN2Q8NCE0 465 aaKnown RBP16.13■□□□□ 0.17
LMX1B-204ENST00000561065 ZNF548Q8NEK5 533 aaPredicted RBP16.13■□□□□ 0.17
LMX1B-204ENST00000561065 CENPTQ96BT3 561 aa16.13■□□□□ 0.17
LMX1B-204ENST00000561065 ARHGEF26Q96DR7 871 aa16.13■□□□□ 0.17
LMX1B-204ENST00000561065 IFT43Q96FT9 208 aa16.13■□□□□ 0.17
LMX1B-204ENST00000561065 BTBD6Q96KE9 485 aa16.13■□□□□ 0.17
LMX1B-204ENST00000561065 WRAP53Q9BUR4 548 aaKnown RBP16.13■□□□□ 0.17
LMX1B-204ENST00000561065 CPEB1Q9BZB8 566 aaKnown RBP16.13■□□□□ 0.17
LMX1B-204ENST00000561065 THAP2Q9H0W7 228 aa16.13■□□□□ 0.17
LMX1B-204ENST00000561065 LUC7LQ9NQ29 371 aaKnown RBP16.13■□□□□ 0.17
LMX1B-204ENST00000561065 MBNL1Q9NR56 388 aaKnown RBP16.13■□□□□ 0.17
LMX1B-204ENST00000561065 ETNK2Q9NVF9 386 aa16.13■□□□□ 0.17
LMX1B-204ENST00000561065 DNAJC28Q9NX36 388 aa16.13■□□□□ 0.17
LMX1B-204ENST00000561065 NENFQ9UMX5 172 aa16.13■□□□□ 0.17
LMX1B-204ENST00000561065 COQ6Q9Y2Z9 468 aa16.13■□□□□ 0.17
LMX1B-204ENST00000561065 ARHGAP42A6NI28 874 aa16.12■□□□□ 0.17
LMX1B-204ENST00000561065 FPGTO14772 594 aa16.12■□□□□ 0.17
LMX1B-204ENST00000561065 CSF2P04141 144 aa16.12■□□□□ 0.17
LMX1B-204ENST00000561065 PRKCGP05129 697 aa16.12■□□□□ 0.17
LMX1B-204ENST00000561065 CYP1A2P05177 515 aa16.12■□□□□ 0.17
LMX1B-204ENST00000561065 C1SP09871 688 aa16.12■□□□□ 0.17
LMX1B-204ENST00000561065 SEMG2Q02383 582 aa16.12■□□□□ 0.17
LMX1B-204ENST00000561065 EIF2B5Q13144 721 aaKnown RBP16.12■□□□□ 0.17
LMX1B-204ENST00000561065 SGCGQ13326 291 aa16.12■□□□□ 0.17
LMX1B-204ENST00000561065 DPYSL2Q16555 572 aa16.12■□□□□ 0.17
LMX1B-204ENST00000561065 RBFAQ8N0V3 343 aa16.12■□□□□ 0.17
LMX1B-204ENST00000561065 FAM174AQ8TBP5 190 aa16.12■□□□□ 0.17
LMX1B-204ENST00000561065 NUP85Q9BW27 656 aa16.12■□□□□ 0.17
LMX1B-204ENST00000561065 TCEAL2Q9H3H9 227 aaPredicted RBP16.12■□□□□ 0.17
LMX1B-204ENST00000561065 CTTNBP2NLQ9P2B4 639 aa16.12■□□□□ 0.17
LMX1B-204ENST00000561065 DKK4Q9UBT3 224 aa16.12■□□□□ 0.17
LMX1B-204ENST00000561065 ANAPC7Q9UJX3 599 aa16.12■□□□□ 0.17
LMX1B-204ENST00000561065 RAXQ9Y2V3 346 aa16.12■□□□□ 0.17
LMX1B-204ENST00000561065 H3BRJ5 948 aa16.11■□□□□ 0.17
LMX1B-204ENST00000561065 DFFAO00273 331 aa16.11■□□□□ 0.17
LMX1B-204ENST00000561065 MMP12P39900 470 aa16.11■□□□□ 0.17
LMX1B-204ENST00000561065 SSR1P43307 286 aaKnown RBP16.11■□□□□ 0.17
LMX1B-204ENST00000561065 INSM1Q01101 510 aaPredicted RBP16.11■□□□□ 0.17
LMX1B-204ENST00000561065 SLC25A11Q02978 314 aaKnown RBP16.11■□□□□ 0.17
LMX1B-204ENST00000561065 GRM3Q14832 879 aa16.11■□□□□ 0.17
LMX1B-204ENST00000561065 IRF4Q15306 451 aa16.11■□□□□ 0.17
LMX1B-204ENST00000561065 TMEM52BQ4KMG9 183 aa16.11■□□□□ 0.17
LMX1B-204ENST00000561065 TMCO4Q5TGY1 634 aa16.11■□□□□ 0.17
LMX1B-204ENST00000561065 NYAP1Q6ZVC0 841 aa16.11■□□□□ 0.17
LMX1B-204ENST00000561065 CPNE8Q86YQ8 564 aa16.11■□□□□ 0.17
LMX1B-204ENST00000561065 DCP2Q8IU60 420 aaKnown RBP16.11■□□□□ 0.17
LMX1B-204ENST00000561065 CAMK1DQ8IU85 385 aa16.11■□□□□ 0.17
LMX1B-204ENST00000561065 MAP7D3Q8IWC1 876 aa16.11■□□□□ 0.17
LMX1B-204ENST00000561065 NIPA2Q8N8Q9 360 aa16.11■□□□□ 0.17
LMX1B-204ENST00000561065 SUV39H2Q9H5I1 410 aa16.11■□□□□ 0.17
LMX1B-204ENST00000561065 SP110Q9HB58 689 aa16.11■□□□□ 0.17
LMX1B-204ENST00000561065 PCDH12Q9NPG4 1184 aa16.11■□□□□ 0.17
LMX1B-204ENST00000561065 ABHD10Q9NUJ1 306 aa16.11■□□□□ 0.17
LMX1B-204ENST00000561065 NLGN3Q9NZ94 848 aa16.11■□□□□ 0.17
LMX1B-204ENST00000561065 ASXL3Q9C0F0 2248 aa16.11■□□□□ 0.17
LMX1B-204ENST00000561065 K7ESM1 405 aa16.1■□□□□ 0.17
LMX1B-204ENST00000561065 TM7SF2O76062 418 aa16.1■□□□□ 0.17
LMX1B-204ENST00000561065 PEX11BO96011 259 aa16.1■□□□□ 0.17
LMX1B-204ENST00000561065 C6P13671 934 aa16.1■□□□□ 0.17
LMX1B-204ENST00000561065 AMPD1P23109 780 aa16.1■□□□□ 0.17
LMX1B-204ENST00000561065 HNRNPKP61978 463 aaKnown RBP eCLIP16.1■□□□□ 0.17
LMX1B-204ENST00000561065 CYP4F3Q08477 520 aa16.1■□□□□ 0.17
LMX1B-204ENST00000561065 RALGDSQ12967 914 aa16.1■□□□□ 0.17
LMX1B-204ENST00000561065 ILKQ13418 452 aa16.1■□□□□ 0.17
LMX1B-204ENST00000561065 UGP2Q16851 508 aa16.1■□□□□ 0.17
LMX1B-204ENST00000561065 POLNQ7Z5Q5 900 aa16.1■□□□□ 0.17
LMX1B-204ENST00000561065 CXorf40AQ8TE69 158 aa16.1■□□□□ 0.17
LMX1B-204ENST00000561065 TEKT4Q8WW24 435 aa16.1■□□□□ 0.17
LMX1B-204ENST00000561065 RFFLQ8WZ73 363 aa16.1■□□□□ 0.17
LMX1B-204ENST00000561065 HSPH1Q92598 858 aa16.1■□□□□ 0.17
LMX1B-204ENST00000561065 ECHDC3Q96DC8 303 aa16.1■□□□□ 0.17
LMX1B-204ENST00000561065 APOLD1Q96LR9 279 aa16.1■□□□□ 0.17
Retrieved 100 of 20,778 RNA–protein pairs in 31.9 ms