RNA–Protein interactions for RNA: ENST00000560954.5

USP8-214, Transcript of ubiquitin specific peptidase 8, humanhuman

TSL 5

Gene USP8, Length 582 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP8-214ENST00000560954 ATP13A3Q9H7F0 1226 aa12.53□□□□□ -0.4
USP8-214ENST00000560954 ITM2BQ9Y287 266 aa12.53□□□□□ -0.4
USP8-214ENST00000560954 ACACBO00763 2458 aa12.53□□□□□ -0.4
USP8-214ENST00000560954 PLXNB3Q9ULL4 1909 aa12.52□□□□□ -0.4
USP8-214ENST00000560954 CHD8Q9HCK8 2581 aa12.52□□□□□ -0.4
USP8-214ENST00000560954 LOC107983988A0A1B0GUW6 1196 aaPredicted RBP12.52□□□□□ -0.41
USP8-214ENST00000560954 A0A1W2PQ67 120 aa12.52□□□□□ -0.41
USP8-214ENST00000560954 A6NNZ2 444 aa12.52□□□□□ -0.41
USP8-214ENST00000560954 BTNL10A8MVZ5 291 aa12.52□□□□□ -0.41
USP8-214ENST00000560954 TOR1BO14657 336 aa12.52□□□□□ -0.41
USP8-214ENST00000560954 SLC31A1O15431 190 aa12.52□□□□□ -0.41
USP8-214ENST00000560954 PSTPIP1O43586 416 aa12.52□□□□□ -0.41
USP8-214ENST00000560954 KDELR1P24390 212 aa12.52□□□□□ -0.41
USP8-214ENST00000560954 CYLC1P35663 651 aaPredicted RBP12.52□□□□□ -0.41
USP8-214ENST00000560954 GRK6P43250 576 aa12.52□□□□□ -0.41
USP8-214ENST00000560954 ARRB1P49407 418 aaPredicted RBP12.52□□□□□ -0.41
USP8-214ENST00000560954 PFN3P60673 137 aa12.52□□□□□ -0.41
USP8-214ENST00000560954 STAT4Q14765 748 aa12.52□□□□□ -0.41
USP8-214ENST00000560954 SUZ12Q15022 739 aaKnown RBP12.52□□□□□ -0.41
USP8-214ENST00000560954 UGP2Q16851 508 aa12.52□□□□□ -0.41
USP8-214ENST00000560954 INAVAQ3KP66 663 aa12.52□□□□□ -0.41
USP8-214ENST00000560954 TIGD7Q6NT04 549 aaPredicted RBP12.52□□□□□ -0.41
USP8-214ENST00000560954 DCP2Q8IU60 420 aaKnown RBP12.52□□□□□ -0.41
USP8-214ENST00000560954 SLC22A18ASQ8N1D0 253 aa12.52□□□□□ -0.41
USP8-214ENST00000560954 PLD5Q8N7P1 536 aa12.52□□□□□ -0.41
USP8-214ENST00000560954 KCTD6Q8NC69 237 aa12.52□□□□□ -0.41
USP8-214ENST00000560954 SAP25Q8TEE9 199 aa12.52□□□□□ -0.41
USP8-214ENST00000560954 RAPGEF5Q92565 580 aa12.52□□□□□ -0.41
USP8-214ENST00000560954 CENPTQ96BT3 561 aa12.52□□□□□ -0.41
USP8-214ENST00000560954 CALR3Q96L12 384 aaKnown RBP12.52□□□□□ -0.41
USP8-214ENST00000560954 BMFQ96LC9 184 aa12.52□□□□□ -0.41
USP8-214ENST00000560954 RNF157Q96PX1 679 aa12.52□□□□□ -0.41
USP8-214ENST00000560954 CALN1Q9BXU9 219 aa12.52□□□□□ -0.41
USP8-214ENST00000560954 KLHL11Q9NVR0 708 aa12.52□□□□□ -0.41
USP8-214ENST00000560954 TOR4AQ9NXH8 423 aa12.52□□□□□ -0.41
USP8-214ENST00000560954 ATP8A1Q9Y2Q0 1164 aa12.52□□□□□ -0.41
USP8-214ENST00000560954 COL27A1Q8IZC6 1860 aaPredicted RBP12.52□□□□□ -0.41
USP8-214ENST00000560954 RIOK3O14730 519 aaKnown RBP12.51□□□□□ -0.41
USP8-214ENST00000560954 RAD51BO15315 384 aa12.51□□□□□ -0.41
USP8-214ENST00000560954 NDUFA10O95299 355 aa12.51□□□□□ -0.41
USP8-214ENST00000560954 THEGLP0DJG4 465 aa12.51□□□□□ -0.41
USP8-214ENST00000560954 MX2P20592 715 aa12.51□□□□□ -0.41
USP8-214ENST00000560954 CCNCP24863 283 aa12.51□□□□□ -0.41
USP8-214ENST00000560954 IGFALSP35858 605 aa12.51□□□□□ -0.41
USP8-214ENST00000560954 MAGEA1P43355 309 aa12.51□□□□□ -0.41
USP8-214ENST00000560954 RABIFP47224 123 aa12.51□□□□□ -0.41
USP8-214ENST00000560954 FAM193AP78312 1265 aa12.51□□□□□ -0.41
USP8-214ENST00000560954 RALGDSQ12967 914 aa12.51□□□□□ -0.41
USP8-214ENST00000560954 ZNF235Q14590 738 aa12.51□□□□□ -0.41
USP8-214ENST00000560954 IFI16Q16666 785 aaKnown RBP12.51□□□□□ -0.41
USP8-214ENST00000560954 TTC7BQ86TV6 843 aa12.51□□□□□ -0.41
USP8-214ENST00000560954 CAMK1DQ8IU85 385 aa12.51□□□□□ -0.41
USP8-214ENST00000560954 TMTC1Q8IUR5 882 aa12.51□□□□□ -0.41
USP8-214ENST00000560954 RHOT1Q8IXI2 618 aa12.51□□□□□ -0.41
USP8-214ENST00000560954 BBS5Q8N3I7 341 aa12.51□□□□□ -0.41
USP8-214ENST00000560954 TP53I13Q8NBR0 393 aaPredicted RBP12.51□□□□□ -0.41
USP8-214ENST00000560954 OR13H1Q8NG92 308 aa12.51□□□□□ -0.41
USP8-214ENST00000560954 KLHDC7BQ96G42 594 aa12.51□□□□□ -0.41
USP8-214ENST00000560954 CAMK1GQ96NX5 476 aa12.51□□□□□ -0.41
USP8-214ENST00000560954 OLFM3Q96PB7 478 aa12.51□□□□□ -0.41
USP8-214ENST00000560954 CDC6Q99741 560 aa12.51□□□□□ -0.41
USP8-214ENST00000560954 FZD3Q9NPG1 666 aa12.51□□□□□ -0.41
USP8-214ENST00000560954 PCDH12Q9NPG4 1184 aa12.51□□□□□ -0.41
USP8-214ENST00000560954 LUC7LQ9NQ29 371 aaKnown RBP12.51□□□□□ -0.41
USP8-214ENST00000560954 DDX56Q9NY93 547 aaKnown RBP12.51□□□□□ -0.41
USP8-214ENST00000560954 DTLQ9NZJ0 730 aa12.51□□□□□ -0.41
USP8-214ENST00000560954 IMPACTQ9P2X3 320 aa12.51□□□□□ -0.41
USP8-214ENST00000560954 CA5BQ9Y2D0 317 aa12.51□□□□□ -0.41
USP8-214ENST00000560954 BTBD3Q9Y2F9 522 aa12.51□□□□□ -0.41
USP8-214ENST00000560954 PCDHA13Q9Y5I0 950 aa12.51□□□□□ -0.41
USP8-214ENST00000560954 TPRP12270 2363 aaKnown RBP12.51□□□□□ -0.41
USP8-214ENST00000560954 SPTY2D1-AS1A0A0U1RR47 76 aa12.5□□□□□ -0.41
USP8-214ENST00000560954 LRRD1A4D1F6 860 aa12.5□□□□□ -0.41
USP8-214ENST00000560954 FAM221BA6H8Z2 402 aa12.5□□□□□ -0.41
USP8-214ENST00000560954 POM121BA6NF01 834 aa12.5□□□□□ -0.41
USP8-214ENST00000560954 IGLON5A6NGN9 336 aa12.5□□□□□ -0.41
USP8-214ENST00000560954 SOWAHDA6NJG2 315 aa12.5□□□□□ -0.41
USP8-214ENST00000560954 MATN3O15232 486 aa12.5□□□□□ -0.41
USP8-214ENST00000560954 TM7SF2O76062 418 aa12.5□□□□□ -0.41
USP8-214ENST00000560954 TRIM16O95361 564 aa12.5□□□□□ -0.41
USP8-214ENST00000560954 GJC1P36383 396 aa12.5□□□□□ -0.41
USP8-214ENST00000560954 SSR1P43307 286 aaKnown RBP12.5□□□□□ -0.41
USP8-214ENST00000560954 MMP13P45452 471 aa12.5□□□□□ -0.41
USP8-214ENST00000560954 GBE1Q04446 702 aa12.5□□□□□ -0.41
USP8-214ENST00000560954 BCL2L1Q07817 233 aa12.5□□□□□ -0.41
USP8-214ENST00000560954 PPIDQ08752 370 aaKnown RBP12.5□□□□□ -0.41
USP8-214ENST00000560954 SLC10A2Q12908 348 aaPredicted RBP12.5□□□□□ -0.41
USP8-214ENST00000560954 TRIP6Q15654 476 aaKnown RBP12.5□□□□□ -0.41
USP8-214ENST00000560954 MARC1Q5VT66 337 aa12.5□□□□□ -0.41
USP8-214ENST00000560954 DPPA4Q7L190 304 aa12.5□□□□□ -0.41
USP8-214ENST00000560954 RAB44Q7Z6P3 723 aaPredicted RBP12.5□□□□□ -0.41
USP8-214ENST00000560954 CXorf40AQ8TE69 158 aa12.5□□□□□ -0.41
USP8-214ENST00000560954 TBATAQ96M53 351 aa12.5□□□□□ -0.41
USP8-214ENST00000560954 C1QTNF7Q9BXJ2 289 aa12.5□□□□□ -0.41
USP8-214ENST00000560954 ANGPTL2Q9UKU9 493 aa12.5□□□□□ -0.41
USP8-214ENST00000560954 REXO2Q9Y3B8 237 aaKnown RBP12.5□□□□□ -0.41
USP8-214ENST00000560954 PPIL1Q9Y3C6 166 aa12.5□□□□□ -0.41
USP8-214ENST00000560954 ZNF106Q9H2Y7 1883 aaKnown RBP12.5□□□□□ -0.41
USP8-214ENST00000560954 SPAARA0A1B0GVQ0 90 aa12.49□□□□□ -0.41
USP8-214ENST00000560954 NEMP1O14524 444 aa12.49□□□□□ -0.41
Retrieved 100 of 20,778 RNA–protein pairs in 20.1 ms