RNA–Protein interactions for RNA: ENST00000560858.1

SPG11-223, Transcript of SPG11, spatacsin vesicle trafficking associated, humanhuman

TSL 5

Gene SPG11, Length 447 nt, Biotype nonsense mediated decay, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPG11-223ENST00000560858 ASRGL1Q7L266 308 aa2.58□□□□□ -2
SPG11-223ENST00000560858 TAOK1Q7L7X3 1001 aa2.58□□□□□ -2
SPG11-223ENST00000560858 TRPM8Q7Z2W7 1104 aa2.58□□□□□ -2
SPG11-223ENST00000560858 CPLX4Q7Z7G2 160 aa2.58□□□□□ -2
SPG11-223ENST00000560858 NOP9Q86U38 636 aaKnown RBP2.58□□□□□ -2
SPG11-223ENST00000560858 RASSF3Q86WH2 238 aa2.58□□□□□ -2
SPG11-223ENST00000560858 SLC13A5Q86YT5 568 aaPredicted RBP2.58□□□□□ -2
SPG11-223ENST00000560858 LRRC34Q8IZ02 419 aa2.58□□□□□ -2
SPG11-223ENST00000560858 LILRB2Q8N423 598 aa2.58□□□□□ -2
SPG11-223ENST00000560858 CCDC63Q8NA47 563 aa2.58□□□□□ -2
SPG11-223ENST00000560858 SLC17A8Q8NDX2 589 aa2.58□□□□□ -2
SPG11-223ENST00000560858 CFAP61Q8NHU2 1237 aa2.58□□□□□ -2
SPG11-223ENST00000560858 ZNF564Q8TBZ8 553 aaPredicted RBP2.58□□□□□ -2
SPG11-223ENST00000560858 MAIP1Q8WWC4 291 aa2.58□□□□□ -2
SPG11-223ENST00000560858 CKAP2Q8WWK9 683 aa2.58□□□□□ -2
SPG11-223ENST00000560858 GLG1Q92896 1179 aa2.58□□□□□ -2
SPG11-223ENST00000560858 FATE1Q969F0 183 aa2.58□□□□□ -2
SPG11-223ENST00000560858 ZNF653Q96CK0 615 aa2.58□□□□□ -2
SPG11-223ENST00000560858 SNF8Q96H20 258 aa2.58□□□□□ -2
SPG11-223ENST00000560858 CCDC114Q96M63 670 aa2.58□□□□□ -2
SPG11-223ENST00000560858 ANKRD27Q96NW4 1050 aa2.58□□□□□ -2
SPG11-223ENST00000560858 PCDHB18PQ96TA0 734 aa2.58□□□□□ -2
SPG11-223ENST00000560858 RIT2Q99578 217 aa2.58□□□□□ -2
SPG11-223ENST00000560858 SELENOSQ9BQE4 189 aa2.58□□□□□ -2
SPG11-223ENST00000560858 LXNQ9BS40 222 aa2.58□□□□□ -2
SPG11-223ENST00000560858 TIPINQ9BVW5 301 aa2.58□□□□□ -2
SPG11-223ENST00000560858 TAOK3Q9H2K8 898 aa2.58□□□□□ -2
SPG11-223ENST00000560858 RANBP17Q9H2T7 1088 aaKnown RBP2.58□□□□□ -2
SPG11-223ENST00000560858 CENPHQ9H3R5 247 aa2.58□□□□□ -2
SPG11-223ENST00000560858 UNC45AQ9H3U1 944 aa2.58□□□□□ -2
SPG11-223ENST00000560858 ZHX3Q9H4I2 956 aa2.58□□□□□ -2
SPG11-223ENST00000560858 NOD2Q9HC29 1040 aa2.58□□□□□ -2
SPG11-223ENST00000560858 HOMER3Q9NSC5 361 aa2.58□□□□□ -2
SPG11-223ENST00000560858 ABCF3Q9NUQ8 709 aa2.58□□□□□ -2
SPG11-223ENST00000560858 INTS9Q9NV88 658 aaKnown RBP2.58□□□□□ -2
SPG11-223ENST00000560858 TRNAU1APQ9NX07 287 aaKnown RBP2.58□□□□□ -2
SPG11-223ENST00000560858 RGL1Q9NZL6 768 aa2.58□□□□□ -2
SPG11-223ENST00000560858 EHD3Q9NZN3 535 aa2.58□□□□□ -2
SPG11-223ENST00000560858 TMOD4Q9NZQ9 345 aa2.58□□□□□ -2
SPG11-223ENST00000560858 MDFICQ9P1T7 246 aa2.58□□□□□ -2
SPG11-223ENST00000560858 CTTNBP2NLQ9P2B4 639 aa2.58□□□□□ -2
SPG11-223ENST00000560858 WRAP73Q9P2S5 460 aaPredicted RBP2.58□□□□□ -2
SPG11-223ENST00000560858 DPP7Q9UHL4 492 aa2.58□□□□□ -2
SPG11-223ENST00000560858 ZBTB21Q9ULJ3 1066 aa2.58□□□□□ -2
SPG11-223ENST00000560858 PROCRQ9UNN8 238 aa2.58□□□□□ -2
SPG11-223ENST00000560858 AGAP1Q9UPQ3 857 aa2.58□□□□□ -2
SPG11-223ENST00000560858 C15orf41Q9Y2V0 281 aa2.58□□□□□ -2
SPG11-223ENST00000560858 SNX24Q9Y343 169 aa2.58□□□□□ -2
SPG11-223ENST00000560858 ACTL7AQ9Y615 435 aa2.58□□□□□ -2
SPG11-223ENST00000560858 UMODL1Q5DID0 1318 aa2.58□□□□□ -2
SPG11-223ENST00000560858 MROH7Q68CQ1 1323 aa2.58□□□□□ -2
SPG11-223ENST00000560858 EMSYQ7Z589 1322 aa2.58□□□□□ -2
SPG11-223ENST00000560858 CITO14578 2027 aa2.58□□□□□ -2
SPG11-223ENST00000560858 TSC2P49815 1807 aa2.57□□□□□ -2
SPG11-223ENST00000560858 SBF1O95248 1867 aa2.57□□□□□ -2
SPG11-223ENST00000560858 TANC1Q9C0D5 1861 aa2.57□□□□□ -2
SPG11-223ENST00000560858 A0A1W2PRG0 241 aa2.57□□□□□ -2
SPG11-223ENST00000560858 TMEM120BA0PK00 339 aa2.57□□□□□ -2
SPG11-223ENST00000560858 ARHGEF35A5YM69 484 aa2.57□□□□□ -2
SPG11-223ENST00000560858 F5H6K3 240 aa2.57□□□□□ -2
SPG11-223ENST00000560858 FOXN3O00409 490 aaPredicted RBP2.57□□□□□ -2
SPG11-223ENST00000560858 MPHOSPH10O00566 681 aaKnown RBP2.57□□□□□ -2
SPG11-223ENST00000560858 TOR1BO14657 336 aa2.57□□□□□ -2
SPG11-223ENST00000560858 PRPF4O43172 522 aaKnown RBP eCLIP2.57□□□□□ -2
SPG11-223ENST00000560858 PSTPIP1O43586 416 aa2.57□□□□□ -2
SPG11-223ENST00000560858 EXOC3O60645 756 aa2.57□□□□□ -2
SPG11-223ENST00000560858 ZC3H11AO75152 810 aaKnown RBP eCLIP2.57□□□□□ -2
SPG11-223ENST00000560858 CDH16O75309 829 aa2.57□□□□□ -2
SPG11-223ENST00000560858 SUN1O94901 812 aa2.57□□□□□ -2
SPG11-223ENST00000560858 ENDOD1O94919 500 aa2.57□□□□□ -2
SPG11-223ENST00000560858 SGPL1O95470 568 aa2.57□□□□□ -2
SPG11-223ENST00000560858 TTC4O95801 387 aa2.57□□□□□ -2
SPG11-223ENST00000560858 GAS8O95995 478 aa2.57□□□□□ -2
SPG11-223ENST00000560858 FTLP02792 175 aaPredicted RBP2.57□□□□□ -2
SPG11-223ENST00000560858 MYBL1P10243 752 aa2.57□□□□□ -2
SPG11-223ENST00000560858 DLATP10515 647 aaKnown RBP2.57□□□□□ -2
SPG11-223ENST00000560858 UNGP13051 313 aaPredicted RBP2.57□□□□□ -2
SPG11-223ENST00000560858 NPR1P16066 1061 aa2.57□□□□□ -2
SPG11-223ENST00000560858 ZFXP17010 805 aaPredicted RBP2.57□□□□□ -2
SPG11-223ENST00000560858 FPR1P21462 350 aa2.57□□□□□ -2
SPG11-223ENST00000560858 ADSSP30520 456 aa2.57□□□□□ -2
SPG11-223ENST00000560858 HOXA13P31271 388 aaPredicted RBP2.57□□□□□ -2
SPG11-223ENST00000560858 GTF2H1P32780 548 aa2.57□□□□□ -2
SPG11-223ENST00000560858 NF2P35240 595 aa2.57□□□□□ -2
SPG11-223ENST00000560858 CHKAP35790 457 aa2.57□□□□□ -2
SPG11-223ENST00000560858 SLC1A1P43005 524 aa2.57□□□□□ -2
SPG11-223ENST00000560858 ANXA11P50995 505 aaKnown RBP2.57□□□□□ -2
SPG11-223ENST00000560858 CYP2J2P51589 502 aa2.57□□□□□ -2
SPG11-223ENST00000560858 ALDH5A1P51649 535 aaPredicted RBP2.57□□□□□ -2
SPG11-223ENST00000560858 GPC3P51654 580 aa2.57□□□□□ -2
SPG11-223ENST00000560858 SLC18A1P54219 525 aa2.57□□□□□ -2
SPG11-223ENST00000560858 PLTPP55058 493 aa2.57□□□□□ -2
SPG11-223ENST00000560858 MFAP3P55082 362 aa2.57□□□□□ -2
SPG11-223ENST00000560858 RWDD2BP57060 319 aa2.57□□□□□ -2
SPG11-223ENST00000560858 KCNJ2P63252 427 aa2.57□□□□□ -2
SPG11-223ENST00000560858 IFI35P80217 286 aaPredicted RBP2.57□□□□□ -2
SPG11-223ENST00000560858 GTF2BQ00403 316 aa2.57□□□□□ -2
SPG11-223ENST00000560858 CDR2Q01850 454 aa2.57□□□□□ -2
SPG11-223ENST00000560858 GCNT1Q02742 428 aa2.57□□□□□ -2
SPG11-223ENST00000560858 KRT17Q04695 432 aa2.57□□□□□ -2
Retrieved 100 of 20,778 RNA–protein pairs in 23.9 ms