RNA–Protein interactions for RNA: ENST00000560856.5

SNRPA1-213, Transcript of small nuclear ribonucleoprotein polypeptide A', humanhuman

TSL 4

Gene SNRPA1, Length 588 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNRPA1-213ENST00000560856 TMEM52BQ4KMG9 183 aa15.41■□□□□ 0.06
SNRPA1-213ENST00000560856 TIGD7Q6NT04 549 aaPredicted RBP15.41■□□□□ 0.06
SNRPA1-213ENST00000560856 BRAT1Q6PJG6 821 aa15.41■□□□□ 0.06
SNRPA1-213ENST00000560856 NT5DC3Q86UY8 548 aa15.41■□□□□ 0.06
SNRPA1-213ENST00000560856 RFX6Q8HWS3 928 aa15.41■□□□□ 0.06
SNRPA1-213ENST00000560856 LRRC8AQ8IWT6 810 aa15.41■□□□□ 0.06
SNRPA1-213ENST00000560856 MFSD2AQ8NA29 543 aa15.41■□□□□ 0.06
SNRPA1-213ENST00000560856 KIAA1524Q8TCG1 905 aa15.41■□□□□ 0.06
SNRPA1-213ENST00000560856 ASB12Q8WXK4 309 aa15.41■□□□□ 0.06
SNRPA1-213ENST00000560856 KLF6Q99612 283 aaPredicted RBP15.41■□□□□ 0.06
SNRPA1-213ENST00000560856 HERPUD2Q9BSE4 406 aa15.41■□□□□ 0.06
SNRPA1-213ENST00000560856 MAK16Q9BXY0 300 aaKnown RBP15.41■□□□□ 0.06
SNRPA1-213ENST00000560856 SLC17A9Q9BYT1 436 aa15.41■□□□□ 0.06
SNRPA1-213ENST00000560856 NT5MQ9NPB1 228 aa15.41■□□□□ 0.06
SNRPA1-213ENST00000560856 PCDH12Q9NPG4 1184 aa15.41■□□□□ 0.06
SNRPA1-213ENST00000560856 HEY1Q9Y5J3 304 aa15.41■□□□□ 0.06
SNRPA1-213ENST00000560856 LOC107983988A0A1B0GUW6 1196 aaPredicted RBP15.4■□□□□ 0.06
SNRPA1-213ENST00000560856 UPK3BL1B0FP48 263 aa15.4■□□□□ 0.06
SNRPA1-213ENST00000560856 UPK3BL2E5RIL1 263 aa15.4■□□□□ 0.06
SNRPA1-213ENST00000560856 KCNK3O14649 394 aa15.4■□□□□ 0.06
SNRPA1-213ENST00000560856 RIOK3O14730 519 aaKnown RBP15.4■□□□□ 0.06
SNRPA1-213ENST00000560856 RAD51BO15315 384 aa15.4■□□□□ 0.06
SNRPA1-213ENST00000560856 ARHGAP6O43182 974 aa15.4■□□□□ 0.06
SNRPA1-213ENST00000560856 CST8O60676 142 aa15.4■□□□□ 0.06
SNRPA1-213ENST00000560856 PAK4O96013 591 aaPredicted RBP15.4■□□□□ 0.06
SNRPA1-213ENST00000560856 CCNB1P14635 433 aa15.4■□□□□ 0.06
SNRPA1-213ENST00000560856 SERPINA4P29622 427 aa15.4■□□□□ 0.06
SNRPA1-213ENST00000560856 ATXN3P54252 364 aaPredicted RBP15.4■□□□□ 0.06
SNRPA1-213ENST00000560856 CCZ1BP86790 482 aa15.4■□□□□ 0.06
SNRPA1-213ENST00000560856 CCZ1P86791 482 aaPredicted RBP15.4■□□□□ 0.06
SNRPA1-213ENST00000560856 BCL2L1Q07817 233 aa15.4■□□□□ 0.06
SNRPA1-213ENST00000560856 KIF5AQ12840 1032 aa15.4■□□□□ 0.06
SNRPA1-213ENST00000560856 TRAF2Q12933 501 aa15.4■□□□□ 0.06
SNRPA1-213ENST00000560856 TFDP2Q14188 446 aa15.4■□□□□ 0.06
SNRPA1-213ENST00000560856 ZNF423Q2M1K9 1284 aa15.4■□□□□ 0.06
SNRPA1-213ENST00000560856 UAP1L1Q3KQV9 507 aa15.4■□□□□ 0.06
SNRPA1-213ENST00000560856 RALGPS1Q5JS13 557 aa15.4■□□□□ 0.06
SNRPA1-213ENST00000560856 FAM182AQ5T1J6 154 aa15.4■□□□□ 0.06
SNRPA1-213ENST00000560856 PIP4P1Q86T03 277 aa15.4■□□□□ 0.06
SNRPA1-213ENST00000560856 IQCHQ86VS3 1027 aa15.4■□□□□ 0.06
SNRPA1-213ENST00000560856 ZSCAN30Q86W11 494 aa15.4■□□□□ 0.06
SNRPA1-213ENST00000560856 SPATS2Q86XZ4 545 aaKnown RBP15.4■□□□□ 0.06
SNRPA1-213ENST00000560856 CCDC13Q8IYE1 715 aa15.4■□□□□ 0.06
SNRPA1-213ENST00000560856 CNTD1Q8N815 330 aa15.4■□□□□ 0.06
SNRPA1-213ENST00000560856 ARRDC2Q8TBH0 407 aa15.4■□□□□ 0.06
SNRPA1-213ENST00000560856 TRAF3IP1Q8TDR0 691 aaPredicted RBP15.4■□□□□ 0.06
SNRPA1-213ENST00000560856 NSMCE1Q8WV22 266 aa15.4■□□□□ 0.06
SNRPA1-213ENST00000560856 ALG3Q92685 438 aa15.4■□□□□ 0.06
SNRPA1-213ENST00000560856 BMFQ96LC9 184 aa15.4■□□□□ 0.06
SNRPA1-213ENST00000560856 IL12RB2Q99665 862 aa15.4■□□□□ 0.06
SNRPA1-213ENST00000560856 GAREM1Q9H706 876 aa15.4■□□□□ 0.06
SNRPA1-213ENST00000560856 FZD3Q9NPG1 666 aa15.4■□□□□ 0.06
SNRPA1-213ENST00000560856 AASDHPPTQ9NRN7 309 aa15.4■□□□□ 0.06
SNRPA1-213ENST00000560856 RBM22Q9NW64 420 aaKnown RBP eCLIP15.4■□□□□ 0.063e-9■■■■■ 38.6
SNRPA1-213ENST00000560856 SAE1Q9UBE0 346 aaPredicted RBP15.4■□□□□ 0.06
SNRPA1-213ENST00000560856 AMACRQ9UHK6 382 aa15.4■□□□□ 0.06
SNRPA1-213ENST00000560856 FNDC3AQ9Y2H6 1198 aaKnown RBP15.4■□□□□ 0.06
SNRPA1-213ENST00000560856 ATP8A1Q9Y2Q0 1164 aa15.4■□□□□ 0.06
SNRPA1-213ENST00000560856 PCDHGC4Q9Y5F7 938 aa15.4■□□□□ 0.06
SNRPA1-213ENST00000560856 ANKRD36A6QL64 1941 aa15.4■□□□□ 0.06
SNRPA1-213ENST00000560856 MACROD2A1Z1Q3 448 aa15.39■□□□□ 0.05
SNRPA1-213ENST00000560856 H0Y8X5 98 aa15.39■□□□□ 0.05
SNRPA1-213ENST00000560856 TLR4O00206 839 aa15.39■□□□□ 0.05
SNRPA1-213ENST00000560856 MMP20O60882 483 aa15.39■□□□□ 0.05
SNRPA1-213ENST00000560856 OPHN1O60890 802 aa15.39■□□□□ 0.05
SNRPA1-213ENST00000560856 JCHAINP01591 159 aa15.39■□□□□ 0.05
SNRPA1-213ENST00000560856 PRKCGP05129 697 aa15.39■□□□□ 0.05
SNRPA1-213ENST00000560856 HLA-DQB2P05538 268 aa15.39■□□□□ 0.05
SNRPA1-213ENST00000560856 ZNF883P0CG24 379 aa15.39■□□□□ 0.05
SNRPA1-213ENST00000560856 PECAM1P16284 738 aaPredicted RBP15.39■□□□□ 0.05
SNRPA1-213ENST00000560856 HNRNPA2B1P22626 353 aaKnown RBP15.39■□□□□ 0.05
SNRPA1-213ENST00000560856 MMP12P39900 470 aa15.39■□□□□ 0.05
SNRPA1-213ENST00000560856 NAP1L1P55209 391 aaKnown RBP15.39■□□□□ 0.05
SNRPA1-213ENST00000560856 NXPH1P58417 271 aa15.39■□□□□ 0.05
SNRPA1-213ENST00000560856 DYNLT1P63172 113 aa15.39■□□□□ 0.05
SNRPA1-213ENST00000560856 IFI35P80217 286 aaPredicted RBP15.39■□□□□ 0.05
SNRPA1-213ENST00000560856 NIPAL4Q0D2K0 466 aa15.39■□□□□ 0.05
SNRPA1-213ENST00000560856 PDK1Q15118 436 aa15.39■□□□□ 0.05
SNRPA1-213ENST00000560856 PPP2R5EQ16537 467 aa15.39■□□□□ 0.05
SNRPA1-213ENST00000560856 TFDP3Q5H9I0 405 aa15.39■□□□□ 0.05
SNRPA1-213ENST00000560856 IL27RAQ6UWB1 636 aa15.39■□□□□ 0.05
SNRPA1-213ENST00000560856 DBX2Q6ZNG2 339 aa15.39■□□□□ 0.05
SNRPA1-213ENST00000560856 GCNT7Q6ZNI0 430 aa15.39■□□□□ 0.05
SNRPA1-213ENST00000560856 ABI3BPQ7Z7G0 1075 aa15.39■□□□□ 0.05
SNRPA1-213ENST00000560856 BBS5Q8N3I7 341 aa15.39■□□□□ 0.05
SNRPA1-213ENST00000560856 CCNYQ8ND76 341 aa15.39■□□□□ 0.05
SNRPA1-213ENST00000560856 CCDC112Q8NEF3 446 aa15.39■□□□□ 0.05
SNRPA1-213ENST00000560856 LENG8Q96PV6 779 aaPredicted RBP15.39■□□□□ 0.05
SNRPA1-213ENST00000560856 MYOCQ99972 504 aa15.39■□□□□ 0.05
SNRPA1-213ENST00000560856 SEMA3CQ99985 751 aa15.39■□□□□ 0.05
SNRPA1-213ENST00000560856 SCUBE2Q9NQ36 999 aa15.39■□□□□ 0.05
SNRPA1-213ENST00000560856 SBDSQ9Y3A5 250 aaKnown RBP eCLIP15.39■□□□□ 0.05
SNRPA1-213ENST00000560856 HS3ST3A1Q9Y663 406 aa15.39■□□□□ 0.05
SNRPA1-213ENST00000560856 CAPN6Q9Y6Q1 641 aa15.39■□□□□ 0.05
SNRPA1-213ENST00000560856 NCOR2Q9Y618 2525 aa15.38■□□□□ 0.05
SNRPA1-213ENST00000560856 CCDC66A2RUB6 948 aa15.38■□□□□ 0.05
SNRPA1-213ENST00000560856 KCNK1O00180 336 aa15.38■□□□□ 0.05
SNRPA1-213ENST00000560856 NEMP1O14524 444 aa15.38■□□□□ 0.05
SNRPA1-213ENST00000560856 FZD6O60353 706 aa15.38■□□□□ 0.05
SNRPA1-213ENST00000560856 SOCS5O75159 536 aa15.38■□□□□ 0.05
Retrieved 100 of 20,778 RNA–protein pairs in 61.5 ms