RNA–Protein interactions for RNA: ENST00000560492.1

CDC42BPB-207, Transcript of CDC42 binding protein kinase beta, humanhuman

TSL 2

Gene CDC42BPB, Length 646 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDC42BPB-207ENST00000560492 MTIF2P46199 727 aaKnown RBP10.62□□□□□ -0.71
CDC42BPB-207ENST00000560492 PPM1FP49593 454 aaPredicted RBP10.62□□□□□ -0.71
CDC42BPB-207ENST00000560492 HK3P52790 923 aa10.62□□□□□ -0.71
CDC42BPB-207ENST00000560492 ATP11AP98196 1134 aa10.62□□□□□ -0.71
CDC42BPB-207ENST00000560492 RAPGEF1Q13905 1077 aa10.62□□□□□ -0.71
CDC42BPB-207ENST00000560492 IRF4Q15306 451 aa10.62□□□□□ -0.71
CDC42BPB-207ENST00000560492 MAP9Q49MG5 647 aa10.62□□□□□ -0.71
CDC42BPB-207ENST00000560492 CFAP58Q5T655 872 aa10.62□□□□□ -0.71
CDC42BPB-207ENST00000560492 TAF3Q5VWG9 929 aa10.62□□□□□ -0.71
CDC42BPB-207ENST00000560492 XKR5Q6UX68 686 aa10.62□□□□□ -0.71
CDC42BPB-207ENST00000560492 GDPD4Q6W3E5 623 aa10.62□□□□□ -0.71
CDC42BPB-207ENST00000560492 SLC47A2Q86VL8 602 aa10.62□□□□□ -0.71
CDC42BPB-207ENST00000560492 ZFAND4Q86XD8 727 aa10.62□□□□□ -0.71
CDC42BPB-207ENST00000560492 CCNJLQ8IV13 435 aa10.62□□□□□ -0.71
CDC42BPB-207ENST00000560492 ZNF683Q8IZ20 524 aa10.62□□□□□ -0.71
CDC42BPB-207ENST00000560492 OR2AP1Q8NGE2 309 aa10.62□□□□□ -0.71
CDC42BPB-207ENST00000560492 JPH3Q8WXH2 748 aaPredicted RBP10.62□□□□□ -0.71
CDC42BPB-207ENST00000560492 ASB12Q8WXK4 309 aa10.62□□□□□ -0.71
CDC42BPB-207ENST00000560492 SHC3Q92529 594 aa10.62□□□□□ -0.71
CDC42BPB-207ENST00000560492 WNT2BQ93097 391 aa10.62□□□□□ -0.71
CDC42BPB-207ENST00000560492 C18orf8Q96DM3 657 aa10.62□□□□□ -0.71
CDC42BPB-207ENST00000560492 CFAP57Q96MR6 1250 aa10.62□□□□□ -0.71
CDC42BPB-207ENST00000560492 TIGD1Q96MW7 591 aa10.62□□□□□ -0.71
CDC42BPB-207ENST00000560492 EDEM3Q9BZQ6 932 aa10.62□□□□□ -0.71
CDC42BPB-207ENST00000560492 LRRN3Q9H3W5 708 aa10.62□□□□□ -0.71
CDC42BPB-207ENST00000560492 MBNL1Q9NR56 388 aaKnown RBP10.62□□□□□ -0.71
CDC42BPB-207ENST00000560492 AKAP7Q9P0M2 348 aaPredicted RBP10.62□□□□□ -0.71
CDC42BPB-207ENST00000560492 KLQ9UEF7 1012 aa10.62□□□□□ -0.71
CDC42BPB-207ENST00000560492 SEPT3Q9UH03 358 aa10.62□□□□□ -0.71
CDC42BPB-207ENST00000560492 RABGEF1Q9UJ41 708 aa10.62□□□□□ -0.71
CDC42BPB-207ENST00000560492 MOSPD1Q9UJG1 213 aa10.62□□□□□ -0.71
CDC42BPB-207ENST00000560492 PNMA8BQ9ULN7 279 aaPredicted RBP10.62□□□□□ -0.71
CDC42BPB-207ENST00000560492 PCDHGA7Q9Y5G6 932 aa10.62□□□□□ -0.71
CDC42BPB-207ENST00000560492 ZFC3H1O60293 1989 aaKnown RBP10.61□□□□□ -0.71
CDC42BPB-207ENST00000560492 IGLV3-10A0A075B6K4 115 aa10.61□□□□□ -0.71
CDC42BPB-207ENST00000560492 PRAMEF33A0A0G2JMD5 474 aa10.61□□□□□ -0.71
CDC42BPB-207ENST00000560492 NTN3O00634 580 aaPredicted RBP10.61□□□□□ -0.71
CDC42BPB-207ENST00000560492 BUB1O43683 1085 aa10.61□□□□□ -0.71
CDC42BPB-207ENST00000560492 PRAMEF10O60809 474 aa10.61□□□□□ -0.71
CDC42BPB-207ENST00000560492 IGSF6O95976 241 aa10.61□□□□□ -0.71
CDC42BPB-207ENST00000560492 GSRP00390 522 aa10.61□□□□□ -0.71
CDC42BPB-207ENST00000560492 ITGB2P05107 769 aa10.61□□□□□ -0.71
CDC42BPB-207ENST00000560492 PCCBP05166 539 aa10.61□□□□□ -0.71
CDC42BPB-207ENST00000560492 ITIH2P19823 946 aa10.61□□□□□ -0.71
CDC42BPB-207ENST00000560492 FLT3P36888 993 aa10.61□□□□□ -0.71
CDC42BPB-207ENST00000560492 MARSP56192 900 aaKnown RBP10.61□□□□□ -0.71
CDC42BPB-207ENST00000560492 BPIFB4P59827 614 aa10.61□□□□□ -0.71
CDC42BPB-207ENST00000560492 RHOAP61586 193 aa10.61□□□□□ -0.71
CDC42BPB-207ENST00000560492 CYP4F2P78329 520 aa10.61□□□□□ -0.71
CDC42BPB-207ENST00000560492 BIRC2Q13490 618 aa10.61□□□□□ -0.71
CDC42BPB-207ENST00000560492 ARHGEF7Q14155 803 aa10.61□□□□□ -0.71
CDC42BPB-207ENST00000560492 LRRC14Q15048 493 aa10.61□□□□□ -0.71
CDC42BPB-207ENST00000560492 TPD52L1Q16890 204 aaPredicted RBP10.61□□□□□ -0.71
CDC42BPB-207ENST00000560492 MYLK3Q32MK0 819 aa10.61□□□□□ -0.71
CDC42BPB-207ENST00000560492 C2CD6Q53TS8 623 aa10.61□□□□□ -0.71
CDC42BPB-207ENST00000560492 ZNF574Q6ZN55 896 aaPredicted RBP10.61□□□□□ -0.71
CDC42BPB-207ENST00000560492 TAF8Q7Z7C8 310 aa10.61□□□□□ -0.71
CDC42BPB-207ENST00000560492 NETO2Q8NC67 525 aa10.61□□□□□ -0.71
CDC42BPB-207ENST00000560492 OR6C4Q8NGE1 309 aa10.61□□□□□ -0.71
CDC42BPB-207ENST00000560492 ATL2Q8NHH9 583 aa10.61□□□□□ -0.71
CDC42BPB-207ENST00000560492 ARHGEF2Q92974 986 aaKnown RBP10.61□□□□□ -0.71
CDC42BPB-207ENST00000560492 ISG20Q96AZ6 181 aaKnown RBP10.61□□□□□ -0.71
CDC42BPB-207ENST00000560492 CENPTQ96BT3 561 aa10.61□□□□□ -0.71
CDC42BPB-207ENST00000560492 PGAP3Q96FM1 320 aaPredicted RBP10.61□□□□□ -0.71
CDC42BPB-207ENST00000560492 TBATAQ96M53 351 aa10.61□□□□□ -0.71
CDC42BPB-207ENST00000560492 GDAP1L1Q96MZ0 367 aa10.61□□□□□ -0.71
CDC42BPB-207ENST00000560492 HAPLN3Q96S86 360 aa10.61□□□□□ -0.71
CDC42BPB-207ENST00000560492 CMKLR1Q99788 373 aa10.61□□□□□ -0.71
CDC42BPB-207ENST00000560492 ZMYND15Q9H091 742 aa10.61□□□□□ -0.71
CDC42BPB-207ENST00000560492 SUDS3Q9H7L9 328 aaPredicted RBP10.61□□□□□ -0.71
CDC42BPB-207ENST00000560492 STARD5Q9NSY2 213 aa10.61□□□□□ -0.71
CDC42BPB-207ENST00000560492 DNAJC12Q9UKB3 198 aa10.61□□□□□ -0.71
CDC42BPB-207ENST00000560492 OR1A2Q9Y585 309 aa10.61□□□□□ -0.71
CDC42BPB-207ENST00000560492 SPTA1P02549 2419 aa10.6□□□□□ -0.71
CDC42BPB-207ENST00000560492 DOPEY2Q9Y3R5 2298 aa10.6□□□□□ -0.71
CDC42BPB-207ENST00000560492 COL12A1Q99715 3063 aa10.6□□□□□ -0.71
CDC42BPB-207ENST00000560492 TMEM110-MUSTN1A8MSY1 372 aa10.6□□□□□ -0.71
CDC42BPB-207ENST00000560492 B4DGG1 531 aa10.6□□□□□ -0.71
CDC42BPB-207ENST00000560492 FOXN3O00409 490 aaPredicted RBP10.6□□□□□ -0.71
CDC42BPB-207ENST00000560492 TOR1BO14657 336 aa10.6□□□□□ -0.71
CDC42BPB-207ENST00000560492 TERTO14746 1132 aaKnown RBP10.6□□□□□ -0.71
CDC42BPB-207ENST00000560492 RAMP2O60895 175 aa10.6□□□□□ -0.71
CDC42BPB-207ENST00000560492 TMCC1O94876 653 aa10.6□□□□□ -0.71
CDC42BPB-207ENST00000560492 TNFP01375 233 aa10.6□□□□□ -0.71
CDC42BPB-207ENST00000560492 MAPKAPK2P49137 400 aa10.6□□□□□ -0.71
CDC42BPB-207ENST00000560492 SRP54P61011 504 aaKnown RBP10.6□□□□□ -0.71
CDC42BPB-207ENST00000560492 TLE1Q04724 770 aa10.6□□□□□ -0.71
CDC42BPB-207ENST00000560492 NFATC4Q14934 902 aa10.6□□□□□ -0.71
CDC42BPB-207ENST00000560492 TBR1Q16650 682 aa10.6□□□□□ -0.71
CDC42BPB-207ENST00000560492 ALG11Q2TAA5 492 aa10.6□□□□□ -0.71
CDC42BPB-207ENST00000560492 COLEC12Q5KU26 742 aa10.6□□□□□ -0.71
CDC42BPB-207ENST00000560492 TMEM164Q5U3C3 297 aa10.6□□□□□ -0.71
CDC42BPB-207ENST00000560492 LVRNQ6Q4G3 990 aa10.6□□□□□ -0.71
CDC42BPB-207ENST00000560492 XYLT1Q86Y38 959 aa10.6□□□□□ -0.71
CDC42BPB-207ENST00000560492 PTRH1Q86Y79 214 aaKnown RBP10.6□□□□□ -0.71
CDC42BPB-207ENST00000560492 TP53I13Q8NBR0 393 aaPredicted RBP10.6□□□□□ -0.71
CDC42BPB-207ENST00000560492 FAM46DQ8NEK8 389 aa10.6□□□□□ -0.71
CDC42BPB-207ENST00000560492 USP7Q93009 1102 aa10.6□□□□□ -0.71
CDC42BPB-207ENST00000560492 WDR92Q96MX6 357 aa10.6□□□□□ -0.71
CDC42BPB-207ENST00000560492 METTL5Q9NRN9 209 aaKnown RBP10.6□□□□□ -0.71
Retrieved 100 of 20,778 RNA–protein pairs in 77.1 ms