RNA–Protein interactions for RNA: ENST00000560445.1

TPM1-223, Transcript of tropomyosin 1, humanhuman

TSL 3 BASIC

Gene TPM1, Length 485 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TPM1-223ENST00000560445 LRCH4O75427 683 aa14.22□□□□□ -0.13
TPM1-223ENST00000560445 CAPNS1P04632 268 aa14.22□□□□□ -0.13
TPM1-223ENST00000560445 JUNDP17535 347 aa14.22□□□□□ -0.13
TPM1-223ENST00000560445 ERCC2P18074 760 aa14.22□□□□□ -0.13
TPM1-223ENST00000560445 KELP23276 732 aa14.22□□□□□ -0.13
TPM1-223ENST00000560445 GKP32189 559 aa14.22□□□□□ -0.13
TPM1-223ENST00000560445 PAPOLAP51003 745 aaKnown RBP14.22□□□□□ -0.13
TPM1-223ENST00000560445 OGDHQ02218 1023 aa14.22□□□□□ -0.13
TPM1-223ENST00000560445 BCL2L1Q07817 233 aa14.22□□□□□ -0.13
TPM1-223ENST00000560445 CAMK2BQ13554 666 aa14.22□□□□□ -0.13
TPM1-223ENST00000560445 FZD2Q14332 565 aa14.22□□□□□ -0.13
TPM1-223ENST00000560445 ZNF235Q14590 738 aa14.22□□□□□ -0.13
TPM1-223ENST00000560445 LRRC14Q15048 493 aa14.22□□□□□ -0.13
TPM1-223ENST00000560445 IQCB1Q15051 598 aa14.22□□□□□ -0.13
TPM1-223ENST00000560445 HADHQ16836 314 aaKnown RBP14.22□□□□□ -0.13
TPM1-223ENST00000560445 UGP2Q16851 508 aa14.22□□□□□ -0.13
TPM1-223ENST00000560445 RALGPS1Q5JS13 557 aa14.22□□□□□ -0.13
TPM1-223ENST00000560445 LRRC49Q8IUZ0 686 aa14.22□□□□□ -0.13
TPM1-223ENST00000560445 LSMEM2Q8N112 164 aa14.22□□□□□ -0.13
TPM1-223ENST00000560445 MDM1Q8TC05 714 aa14.22□□□□□ -0.13
TPM1-223ENST00000560445 TEKT4Q8WW24 435 aa14.22□□□□□ -0.13
TPM1-223ENST00000560445 DEPDC7Q96QD5 511 aa14.22□□□□□ -0.13
TPM1-223ENST00000560445 MYO1AQ9UBC5 1043 aa14.22□□□□□ -0.13
TPM1-223ENST00000560445 APOBEC3BQ9UH17 382 aaKnown RBP14.22□□□□□ -0.13
TPM1-223ENST00000560445 ATP8A1Q9Y2Q0 1164 aa14.22□□□□□ -0.13
TPM1-223ENST00000560445 LUC7L2Q9Y383 392 aaKnown RBP14.22□□□□□ -0.13
TPM1-223ENST00000560445 UCHL5Q9Y5K5 329 aaKnown RBP eCLIP14.22□□□□□ -0.131e-6■■■□□ 19.1
TPM1-223ENST00000560445 ACTL7AQ9Y615 435 aa14.22□□□□□ -0.13
TPM1-223ENST00000560445 AK5Q9Y6K8 562 aa14.22□□□□□ -0.13
TPM1-223ENST00000560445 FAM149AA5PLN7 773 aa14.21□□□□□ -0.13
TPM1-223ENST00000560445 K7ESM1 405 aa14.21□□□□□ -0.13
TPM1-223ENST00000560445 ATMINO43313 823 aaPredicted RBP14.21□□□□□ -0.13
TPM1-223ENST00000560445 LZTS3O60299 673 aaPredicted RBP14.21□□□□□ -0.13
TPM1-223ENST00000560445 ANXA6P08133 673 aa14.21□□□□□ -0.13
TPM1-223ENST00000560445 TPM1P09493 284 aa14.21□□□□□ -0.13
TPM1-223ENST00000560445 ALPIP09923 528 aa14.21□□□□□ -0.13
TPM1-223ENST00000560445 ACTN2P35609 894 aa14.21□□□□□ -0.13
TPM1-223ENST00000560445 FANCCQ00597 558 aa14.21□□□□□ -0.13
TPM1-223ENST00000560445 PPARDQ03181 441 aa14.21□□□□□ -0.13
TPM1-223ENST00000560445 CYP4F3Q08477 520 aa14.21□□□□□ -0.13
TPM1-223ENST00000560445 TARDBPQ13148 414 aaKnown RBP eCLIP14.21□□□□□ -0.13
TPM1-223ENST00000560445 FGL2Q14314 439 aa14.21□□□□□ -0.13
TPM1-223ENST00000560445 RTP5Q14D33 572 aa14.21□□□□□ -0.13
TPM1-223ENST00000560445 AGERQ15109 404 aa14.21□□□□□ -0.13
TPM1-223ENST00000560445 ELOCQ15369 112 aa14.21□□□□□ -0.13
TPM1-223ENST00000560445 DPYSL2Q16555 572 aa14.21□□□□□ -0.13
TPM1-223ENST00000560445 LRRC69Q6ZNQ3 347 aa14.21□□□□□ -0.13
TPM1-223ENST00000560445 SRLQ86TD4 932 aa14.21□□□□□ -0.13
TPM1-223ENST00000560445 NIPA2Q8N8Q9 360 aa14.21□□□□□ -0.13
TPM1-223ENST00000560445 DCBLD1Q8N8Z6 715 aa14.21□□□□□ -0.13
TPM1-223ENST00000560445 CENPTQ96BT3 561 aa14.21□□□□□ -0.13
TPM1-223ENST00000560445 CELF6Q96J87 481 aaKnown RBP14.21□□□□□ -0.13
TPM1-223ENST00000560445 EXOC2Q96KP1 924 aa14.21□□□□□ -0.13
TPM1-223ENST00000560445 APOLD1Q96LR9 279 aa14.21□□□□□ -0.13
TPM1-223ENST00000560445 NAP1L5Q96NT1 182 aaPredicted RBP14.21□□□□□ -0.13
TPM1-223ENST00000560445 PSKH2Q96QS6 385 aa14.21□□□□□ -0.13
TPM1-223ENST00000560445 KCTD15Q96SI1 283 aaPredicted RBP14.21□□□□□ -0.13
TPM1-223ENST00000560445 GPATCH2LQ9NWQ4 482 aa14.21□□□□□ -0.13
TPM1-223ENST00000560445 RCOR3Q9P2K3 495 aaPredicted RBP14.21□□□□□ -0.13
TPM1-223ENST00000560445 DOLKQ9UPQ8 538 aa14.21□□□□□ -0.13
TPM1-223ENST00000560445 ITM2BQ9Y287 266 aa14.21□□□□□ -0.13
TPM1-223ENST00000560445 MYO1FO00160 1098 aa14.2□□□□□ -0.14
TPM1-223ENST00000560445 RNF103O00237 685 aa14.2□□□□□ -0.14
TPM1-223ENST00000560445 PDE2AO00408 941 aaPredicted RBP14.2□□□□□ -0.14
TPM1-223ENST00000560445 RAD51BO15315 384 aa14.2□□□□□ -0.14
TPM1-223ENST00000560445 MMP20O60882 483 aa14.2□□□□□ -0.14
TPM1-223ENST00000560445 SOCS5O75159 536 aa14.2□□□□□ -0.14
TPM1-223ENST00000560445 RASGRP1O95267 797 aa14.2□□□□□ -0.14
TPM1-223ENST00000560445 TIMP2P16035 220 aa14.2□□□□□ -0.14
TPM1-223ENST00000560445 MTM1Q13496 603 aa14.2□□□□□ -0.14
TPM1-223ENST00000560445 TRIM14Q14142 442 aa14.2□□□□□ -0.14
TPM1-223ENST00000560445 CYTH1Q15438 398 aa14.2□□□□□ -0.14
TPM1-223ENST00000560445 NR0B2Q15466 257 aa14.2□□□□□ -0.14
TPM1-223ENST00000560445 TSR1Q2NL82 804 aaKnown RBP14.2□□□□□ -0.14
TPM1-223ENST00000560445 FAXCQ5TGI0 409 aa14.2□□□□□ -0.14
TPM1-223ENST00000560445 AFMIDQ63HM1 303 aa14.2□□□□□ -0.14
TPM1-223ENST00000560445 ESRP1Q6NXG1 681 aaKnown RBP14.2□□□□□ -0.14
TPM1-223ENST00000560445 LVRNQ6Q4G3 990 aa14.2□□□□□ -0.14
TPM1-223ENST00000560445 PHACTR4Q8IZ21 702 aa14.2□□□□□ -0.14
TPM1-223ENST00000560445 NDUFAF2Q8N183 169 aa14.2□□□□□ -0.14
TPM1-223ENST00000560445 ATPAF2Q8N5M1 289 aa14.2□□□□□ -0.14
TPM1-223ENST00000560445 MAPK15Q8TD08 544 aa14.2□□□□□ -0.14
TPM1-223ENST00000560445 LMX1AQ8TE12 382 aa14.2□□□□□ -0.14
TPM1-223ENST00000560445 FUCA2Q9BTY2 467 aa14.2□□□□□ -0.14
TPM1-223ENST00000560445 WRAP53Q9BUR4 548 aaKnown RBP14.2□□□□□ -0.14
TPM1-223ENST00000560445 MAGEB5Q9BZ81 275 aa14.2□□□□□ -0.14
TPM1-223ENST00000560445 SLC39A8Q9C0K1 460 aa14.2□□□□□ -0.14
TPM1-223ENST00000560445 KLC2Q9H0B6 622 aa14.2□□□□□ -0.14
TPM1-223ENST00000560445 CBX8Q9HC52 389 aa14.2□□□□□ -0.14
TPM1-223ENST00000560445 PCDH12Q9NPG4 1184 aa14.2□□□□□ -0.14
TPM1-223ENST00000560445 STAU2Q9NUL3 570 aaKnown RBP eCLIP14.2□□□□□ -0.14
TPM1-223ENST00000560445 UCKL1Q9NWZ5 548 aa14.2□□□□□ -0.14
TPM1-223ENST00000560445 CAPN11Q9UMQ6 739 aa14.2□□□□□ -0.14
TPM1-223ENST00000560445 RAXQ9Y2V3 346 aa14.2□□□□□ -0.14
TPM1-223ENST00000560445 GPSM3Q9Y4H4 160 aa14.2□□□□□ -0.14
TPM1-223ENST00000560445 TDRD6O60522 2096 aaKnown RBP14.19□□□□□ -0.14
TPM1-223ENST00000560445 CFAP47Q6ZTR5 3102 aa14.19□□□□□ -0.14
TPM1-223ENST00000560445 A0A087WV48 116 aa14.19□□□□□ -0.14
TPM1-223ENST00000560445 LMO7DNF2Z398 122 aa14.19□□□□□ -0.14
TPM1-223ENST00000560445 J3KR12 359 aa14.19□□□□□ -0.14
Retrieved 100 of 20,778 RNA–protein pairs in 135.1 ms