RNA–Protein interactions for RNA: ENST00000560371.5

TRAF3-208, Transcript of TNF receptor associated factor 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene TRAF3, Length 7,640 nt, Biotype protein coding, Subcellular localisation Cytosol .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAF3-208ENST00000560371 MRPS35P82673 323 aaKnown RBP13.55□□□□□ -0.24
TRAF3-208ENST00000560371 CDK18Q07002 472 aa13.55□□□□□ -0.24
TRAF3-208ENST00000560371 RALGDSQ12967 914 aa13.55□□□□□ -0.24
TRAF3-208ENST00000560371 SAMD4BQ5PRF9 694 aaKnown RBP13.55□□□□□ -0.24
TRAF3-208ENST00000560371 POTEHQ6S545 545 aa13.55□□□□□ -0.24
TRAF3-208ENST00000560371 NEK10Q6ZWH5 1172 aa13.55□□□□□ -0.24
TRAF3-208ENST00000560371 HEXDCQ8WVB3 486 aa13.55□□□□□ -0.24
TRAF3-208ENST00000560371 STMN3Q9NZ72 180 aa13.55□□□□□ -0.24
TRAF3-208ENST00000560371 DUX4Q9UBX2 424 aa13.55□□□□□ -0.24
TRAF3-208ENST00000560371 CHKBQ9Y259 395 aa13.55□□□□□ -0.24
TRAF3-208ENST00000560371 ATRNO75882 1429 aa13.55□□□□□ -0.24
TRAF3-208ENST00000560371 MRASO14807 208 aa13.54□□□□□ -0.24
TRAF3-208ENST00000560371 MSI1O43347 362 aaKnown RBP13.54□□□□□ -0.24
TRAF3-208ENST00000560371 KLRC4O43908 158 aa13.54□□□□□ -0.24
TRAF3-208ENST00000560371 LDLRP01130 860 aa13.54□□□□□ -0.24
TRAF3-208ENST00000560371 HLA-DQA2P01906 255 aa13.54□□□□□ -0.24
TRAF3-208ENST00000560371 EPHX1P07099 455 aa13.54□□□□□ -0.24
TRAF3-208ENST00000560371 APTXQ7Z2E3 356 aaKnown RBP13.54□□□□□ -0.24
TRAF3-208ENST00000560371 GPR135Q8IZ08 494 aa13.54□□□□□ -0.24
TRAF3-208ENST00000560371 LHX5Q9H2C1 402 aa13.54□□□□□ -0.24
TRAF3-208ENST00000560371 NOD2Q9HC29 1040 aa13.54□□□□□ -0.24
TRAF3-208ENST00000560371 AP3M1Q9Y2T2 418 aa13.54□□□□□ -0.24
TRAF3-208ENST00000560371 SLC25A12O75746 678 aa13.54□□□□□ -0.24
TRAF3-208ENST00000560371 EOMESO95936 686 aa13.54□□□□□ -0.24
TRAF3-208ENST00000560371 PTPN4P29074 926 aa13.54□□□□□ -0.24
TRAF3-208ENST00000560371 LRPAP1P30533 357 aa13.54□□□□□ -0.24
TRAF3-208ENST00000560371 SF1Q15637 639 aaKnown RBP13.54□□□□□ -0.24
TRAF3-208ENST00000560371 PPP2R2DQ66LE6 453 aa13.54□□□□□ -0.24
TRAF3-208ENST00000560371 ZDHHC13Q8IUH4 622 aa13.54□□□□□ -0.24
TRAF3-208ENST00000560371 PHPT1Q9NRX4 125 aaPredicted RBP13.54□□□□□ -0.24
TRAF3-208ENST00000560371 TMEM216Q9P0N5 145 aa13.54□□□□□ -0.24
TRAF3-208ENST00000560371 GULP1Q9UBP9 304 aa13.54□□□□□ -0.24
TRAF3-208ENST00000560371 SLIT3O75094 1523 aa13.54□□□□□ -0.24
TRAF3-208ENST00000560371 SMIM31A0A1B0GVY4 71 aa13.54□□□□□ -0.24
TRAF3-208ENST00000560371 LBPP18428 481 aa13.54□□□□□ -0.24
TRAF3-208ENST00000560371 TAF13Q15543 124 aa13.54□□□□□ -0.24
TRAF3-208ENST00000560371 CREG2Q8IUH2 290 aa13.54□□□□□ -0.24
TRAF3-208ENST00000560371 ALLCQ8N6M5 410 aa13.54□□□□□ -0.24
TRAF3-208ENST00000560371 ITFG1Q8TB96 612 aa13.54□□□□□ -0.24
TRAF3-208ENST00000560371 SLC25A23Q9BV35 468 aa13.54□□□□□ -0.24
TRAF3-208ENST00000560371 TRMT13Q9NUP7 481 aaKnown RBP13.54□□□□□ -0.24
TRAF3-208ENST00000560371 ECM1Q16610 540 aa13.54□□□□□ -0.24
TRAF3-208ENST00000560371 POU5F2Q8N7G0 328 aa13.54□□□□□ -0.24
TRAF3-208ENST00000560371 OR52K2Q8NGK3 314 aa13.54□□□□□ -0.24
TRAF3-208ENST00000560371 SLC24A3Q9HC58 644 aa13.54□□□□□ -0.24
TRAF3-208ENST00000560371 ZNF780BQ9Y6R6 833 aa13.54□□□□□ -0.24
TRAF3-208ENST00000560371 KRT33AO76009 404 aa13.54□□□□□ -0.24
TRAF3-208ENST00000560371 RAB10P61026 200 aa13.54□□□□□ -0.24
TRAF3-208ENST00000560371 TBX2Q13207 712 aaPredicted RBP13.54□□□□□ -0.24
TRAF3-208ENST00000560371 PARP15Q460N3 678 aa13.54□□□□□ -0.24
TRAF3-208ENST00000560371 CCDC92Q53HC0 331 aaPredicted RBP13.54□□□□□ -0.24
TRAF3-208ENST00000560371 OR14C36Q8NHC7 312 aa13.54□□□□□ -0.24
TRAF3-208ENST00000560371 RIPOR3Q96MK2 946 aa13.54□□□□□ -0.24
TRAF3-208ENST00000560371 PALM2-AKAP2B1ALY0 433 aaPredicted RBP13.54□□□□□ -0.24
TRAF3-208ENST00000560371 RPL22P35268 128 aaKnown RBP13.54□□□□□ -0.24
TRAF3-208ENST00000560371 MAPKAPK3Q16644 382 aa13.54□□□□□ -0.24
TRAF3-208ENST00000560371 TRIM71Q2Q1W2 868 aaKnown RBP13.54□□□□□ -0.24
TRAF3-208ENST00000560371 HYIQ5T013 277 aa13.54□□□□□ -0.24
TRAF3-208ENST00000560371 STK32CQ86UX6 486 aa13.54□□□□□ -0.24
TRAF3-208ENST00000560371 APOL4Q9BPW4 351 aa13.54□□□□□ -0.24
TRAF3-208ENST00000560371 TMEM79Q9BSE2 394 aa13.54□□□□□ -0.24
TRAF3-208ENST00000560371 PCDH12Q9NPG4 1184 aa13.54□□□□□ -0.24
TRAF3-208ENST00000560371 MRC1P22897 1456 aa13.53□□□□□ -0.24
TRAF3-208ENST00000560371 BCL9LQ86UU0 1499 aa13.53□□□□□ -0.24
TRAF3-208ENST00000560371 SYN3O14994 580 aa13.53□□□□□ -0.24
TRAF3-208ENST00000560371 RECQL5O94762 991 aaPredicted RBP13.53□□□□□ -0.24
TRAF3-208ENST00000560371 OR4Q2P0C623 313 aa13.53□□□□□ -0.24
TRAF3-208ENST00000560371 MC4RP32245 332 aa13.53□□□□□ -0.24
TRAF3-208ENST00000560371 SLC5A3P53794 718 aa13.53□□□□□ -0.24
TRAF3-208ENST00000560371 IFI35P80217 286 aaPredicted RBP13.53□□□□□ -0.24
TRAF3-208ENST00000560371 ZCWPW2Q504Y3 356 aa13.53□□□□□ -0.24
TRAF3-208ENST00000560371 GPAT3Q53EU6 434 aa13.53□□□□□ -0.24
TRAF3-208ENST00000560371 CRTC3Q6UUV7 619 aa13.53□□□□□ -0.24
TRAF3-208ENST00000560371 GPR156Q8NFN8 814 aa13.53□□□□□ -0.24
TRAF3-208ENST00000560371 MRPL57Q9BQC6 102 aaKnown RBP13.53□□□□□ -0.24
TRAF3-208ENST00000560371 ACAT2Q9BWD1 397 aa13.53□□□□□ -0.24
TRAF3-208ENST00000560371 TRIT1Q9H3H1 467 aaKnown RBP13.53□□□□□ -0.24
TRAF3-208ENST00000560371 PEAK1Q9H792 1746 aa13.53□□□□□ -0.24
TRAF3-208ENST00000560371 LGR5O75473 907 aa13.53□□□□□ -0.24
TRAF3-208ENST00000560371 WASP42768 502 aa13.53□□□□□ -0.24
TRAF3-208ENST00000560371 NAA20P61599 178 aa13.53□□□□□ -0.24
TRAF3-208ENST00000560371 BMT2Q1RMZ1 405 aa13.53□□□□□ -0.24
TRAF3-208ENST00000560371 SREK1IP1Q8N9Q2 155 aaPredicted RBP13.53□□□□□ -0.24
TRAF3-208ENST00000560371 CD101Q93033 1021 aa13.53□□□□□ -0.24
TRAF3-208ENST00000560371 LENG1Q96BZ8 264 aaPredicted RBP13.53□□□□□ -0.24
TRAF3-208ENST00000560371 NIFKQ9BYG3 293 aaKnown RBP13.53□□□□□ -0.24
TRAF3-208ENST00000560371 DUS2Q9NX74 493 aaKnown RBP13.53□□□□□ -0.24
TRAF3-208ENST00000560371 PEX1O43933 1283 aa13.53□□□□□ -0.24
TRAF3-208ENST00000560371 POLD2P49005 469 aa13.53□□□□□ -0.24
TRAF3-208ENST00000560371 RPL14P50914 215 aaKnown RBP13.53□□□□□ -0.24
TRAF3-208ENST00000560371 ALKBH2Q6NS38 261 aa13.53□□□□□ -0.24
TRAF3-208ENST00000560371 RNF148Q8N7C7 305 aa13.53□□□□□ -0.24
TRAF3-208ENST00000560371 HDAC7Q8WUI4 952 aa13.53□□□□□ -0.24
TRAF3-208ENST00000560371 BTBD9Q96Q07 612 aa13.53□□□□□ -0.24
TRAF3-208ENST00000560371 PCYOX1Q9UHG3 505 aa13.53□□□□□ -0.24
TRAF3-208ENST00000560371 ME2P23368 584 aa13.53□□□□□ -0.24
TRAF3-208ENST00000560371 ATP5F1P24539 256 aaPredicted RBP13.53□□□□□ -0.24
TRAF3-208ENST00000560371 WNT3AP56704 352 aa13.53□□□□□ -0.24
TRAF3-208ENST00000560371 RNF44Q7L0R7 432 aa13.53□□□□□ -0.24
TRAF3-208ENST00000560371 PTGR2Q8N8N7 351 aaPredicted RBP13.53□□□□□ -0.24
Retrieved 100 of 20,778 RNA–protein pairs in 24.5 ms