RNA–Protein interactions for RNA: ENST00000560309.5

ETFA-213, Transcript of electron transfer flavoprotein subunit alpha, humanhuman

TSL 3

Gene ETFA, Length 633 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ETFA-213ENST00000560309 RRP8O43159 456 aaKnown RBP20.84■□□□□ 0.93
ETFA-213ENST00000560309 OPA1O60313 960 aa20.84■□□□□ 0.93
ETFA-213ENST00000560309 PALMO75781 387 aa20.84■□□□□ 0.93
ETFA-213ENST00000560309 SERPINC1P01008 464 aa20.84■□□□□ 0.93
ETFA-213ENST00000560309 MIPP30301 263 aa20.84■□□□□ 0.93
ETFA-213ENST00000560309 ACTN2P35609 894 aa20.84■□□□□ 0.93
ETFA-213ENST00000560309 PAPOLAP51003 745 aaKnown RBP20.84■□□□□ 0.93
ETFA-213ENST00000560309 RENBPP51606 427 aa20.84■□□□□ 0.93
ETFA-213ENST00000560309 IL10RBQ08334 325 aa20.84■□□□□ 0.93
ETFA-213ENST00000560309 LRRC14Q15048 493 aa20.84■□□□□ 0.93
ETFA-213ENST00000560309 BOLA3Q53S33 107 aa20.84■□□□□ 0.93
ETFA-213ENST00000560309 CDCP2Q5VXM1 449 aa20.84■□□□□ 0.93
ETFA-213ENST00000560309 MACC1Q6ZN28 852 aa20.84■□□□□ 0.93
ETFA-213ENST00000560309 PDZD3Q86UT5 571 aa20.84■□□□□ 0.93
ETFA-213ENST00000560309 VPS36Q86VN1 386 aa20.84■□□□□ 0.93
ETFA-213ENST00000560309 SYN2Q92777 582 aaPredicted RBP20.84■□□□□ 0.93
ETFA-213ENST00000560309 SNRNP25Q9BV90 132 aaKnown RBP20.84■□□□□ 0.93
ETFA-213ENST00000560309 ISCUQ9H1K1 167 aa20.84■□□□□ 0.93
ETFA-213ENST00000560309 ATP13A3Q9H7F0 1226 aa20.84■□□□□ 0.93
ETFA-213ENST00000560309 ZWILCHQ9H900 591 aa20.84■□□□□ 0.93
ETFA-213ENST00000560309 PCSK1NQ9UHG2 260 aa20.84■□□□□ 0.93
ETFA-213ENST00000560309 DSPP15924 2871 aaKnown RBP20.83■□□□□ 0.93
ETFA-213ENST00000560309 ERCC2P18074 760 aa20.83■□□□□ 0.93
ETFA-213ENST00000560309 HTR1BP28222 390 aa20.83■□□□□ 0.93
ETFA-213ENST00000560309 SERPINA4P29622 427 aa20.83■□□□□ 0.93
ETFA-213ENST00000560309 EIF4A3P38919 411 aaKnown RBP20.83■□□□□ 0.93
ETFA-213ENST00000560309 EIF2B5Q13144 721 aaKnown RBP20.83■□□□□ 0.93
ETFA-213ENST00000560309 KLHL40Q2TBA0 621 aa20.83■□□□□ 0.93
ETFA-213ENST00000560309 AFMIDQ63HM1 303 aa20.83■□□□□ 0.93
ETFA-213ENST00000560309 CAVIN1Q6NZI2 390 aaKnown RBP20.83■□□□□ 0.93
ETFA-213ENST00000560309 SRLQ86TD4 932 aa20.83■□□□□ 0.93
ETFA-213ENST00000560309 FSTL5Q8N475 847 aaPredicted RBP20.83■□□□□ 0.93
ETFA-213ENST00000560309 ARFGAP1Q8N6T3 406 aa20.83■□□□□ 0.93
ETFA-213ENST00000560309 TP53I13Q8NBR0 393 aaPredicted RBP20.83■□□□□ 0.93
ETFA-213ENST00000560309 WDR48Q8TAF3 677 aa20.83■□□□□ 0.93
ETFA-213ENST00000560309 LMX1AQ8TE12 382 aa20.83■□□□□ 0.93
ETFA-213ENST00000560309 SCG3Q8WXD2 468 aaKnown RBP20.83■□□□□ 0.93
ETFA-213ENST00000560309 FGF11Q92914 225 aa20.83■□□□□ 0.93
ETFA-213ENST00000560309 SP110Q9HB58 689 aa20.83■□□□□ 0.93
ETFA-213ENST00000560309 FREM2Q5SZK8 3169 aa20.83■□□□□ 0.92
ETFA-213ENST00000560309 A0A1W2PQ67 120 aa20.82■□□□□ 0.92
ETFA-213ENST00000560309 EME2A4GXA9 379 aaPredicted RBP20.82■□□□□ 0.92
ETFA-213ENST00000560309 J3KR12 359 aa20.82■□□□□ 0.92
ETFA-213ENST00000560309 DDX3XO00571 662 aaKnown RBP eCLIP20.82■□□□□ 0.921e-24■■■■□ 22.4
ETFA-213ENST00000560309 INSIG1O15503 277 aa20.82■□□□□ 0.92
ETFA-213ENST00000560309 LZTS3O60299 673 aaPredicted RBP20.82■□□□□ 0.92
ETFA-213ENST00000560309 IGFALSP35858 605 aa20.82■□□□□ 0.92
ETFA-213ENST00000560309 EIF2S3P41091 472 aaKnown RBP20.82■□□□□ 0.92
ETFA-213ENST00000560309 SEMG2Q02383 582 aa20.82■□□□□ 0.92
ETFA-213ENST00000560309 PPARDQ03181 441 aa20.82■□□□□ 0.92
ETFA-213ENST00000560309 FAXCQ5TGI0 409 aa20.82■□□□□ 0.92
ETFA-213ENST00000560309 LVRNQ6Q4G3 990 aa20.82■□□□□ 0.92
ETFA-213ENST00000560309 PHACTR4Q8IZ21 702 aa20.82■□□□□ 0.92
ETFA-213ENST00000560309 SNIP1Q8TAD8 396 aaKnown RBP20.82■□□□□ 0.92
ETFA-213ENST00000560309 ZNF653Q96CK0 615 aa20.82■□□□□ 0.92
ETFA-213ENST00000560309 CELF6Q96J87 481 aaKnown RBP20.82■□□□□ 0.92
ETFA-213ENST00000560309 ZNF599Q96NL3 588 aa20.82■□□□□ 0.92
ETFA-213ENST00000560309 NAP1L5Q96NT1 182 aaPredicted RBP20.82■□□□□ 0.92
ETFA-213ENST00000560309 CINPQ9BW66 212 aaPredicted RBP20.82■□□□□ 0.92
ETFA-213ENST00000560309 GPATCH2LQ9NWQ4 482 aa20.82■□□□□ 0.92
ETFA-213ENST00000560309 APOBEC3BQ9UH17 382 aaKnown RBP20.82■□□□□ 0.92
ETFA-213ENST00000560309 KLF15Q9UIH9 416 aa20.82■□□□□ 0.92
ETFA-213ENST00000560309 A0A1W2PQJ5 194 aa20.81■□□□□ 0.92
ETFA-213ENST00000560309 LMO7DNF2Z398 122 aa20.81■□□□□ 0.92
ETFA-213ENST00000560309 LRCH4O75427 683 aa20.81■□□□□ 0.92
ETFA-213ENST00000560309 NEBLO76041 1014 aa20.81■□□□□ 0.92
ETFA-213ENST00000560309 ANXA6P08133 673 aa20.81■□□□□ 0.92
ETFA-213ENST00000560309 NFKBIAP25963 317 aa20.81■□□□□ 0.92
ETFA-213ENST00000560309 HSPA9P38646 679 aaKnown RBP20.81■□□□□ 0.92
ETFA-213ENST00000560309 ARL4AP40617 200 aa20.81■□□□□ 0.92
ETFA-213ENST00000560309 ABCG1P45844 678 aa20.81■□□□□ 0.92
ETFA-213ENST00000560309 CLDN6P56747 220 aa20.81■□□□□ 0.92
ETFA-213ENST00000560309 BCL2L1Q07817 233 aa20.81■□□□□ 0.92
ETFA-213ENST00000560309 PIGHQ14442 188 aaPredicted RBP20.81■□□□□ 0.92
ETFA-213ENST00000560309 IQCB1Q15051 598 aa20.81■□□□□ 0.92
ETFA-213ENST00000560309 NR0B2Q15466 257 aa20.81■□□□□ 0.92
ETFA-213ENST00000560309 CA9Q16790 459 aa20.81■□□□□ 0.92
ETFA-213ENST00000560309 PPP6R3Q5H9R7 873 aaPredicted RBP20.81■□□□□ 0.92
ETFA-213ENST00000560309 KDM7AQ6ZMT4 941 aa20.81■□□□□ 0.92
ETFA-213ENST00000560309 IFI44Q8TCB0 444 aa20.81■□□□□ 0.92
ETFA-213ENST00000560309 MAPK15Q8TD08 544 aa20.81■□□□□ 0.92
ETFA-213ENST00000560309 NAT6Q93015 286 aa20.81■□□□□ 0.92
ETFA-213ENST00000560309 EXOC2Q96KP1 924 aa20.81■□□□□ 0.92
ETFA-213ENST00000560309 KCTD15Q96SI1 283 aaPredicted RBP20.81■□□□□ 0.92
ETFA-213ENST00000560309 WRAP53Q9BUR4 548 aaKnown RBP20.81■□□□□ 0.92
ETFA-213ENST00000560309 BOCQ9BWV1 1114 aa20.81■□□□□ 0.92
ETFA-213ENST00000560309 PCDH12Q9NPG4 1184 aa20.81■□□□□ 0.92
ETFA-213ENST00000560309 KCTD5Q9NXV2 234 aa20.81■□□□□ 0.92
ETFA-213ENST00000560309 ATP8A1Q9Y2Q0 1164 aa20.81■□□□□ 0.92
ETFA-213ENST00000560309 LY6G6EA0A0G2JKS1 128 aa20.8■□□□□ 0.92
ETFA-213ENST00000560309 LOC107983988A0A1B0GUW6 1196 aaPredicted RBP20.8■□□□□ 0.92
ETFA-213ENST00000560309 H3BRJ5 948 aa20.8■□□□□ 0.92
ETFA-213ENST00000560309 ATMINO43313 823 aaPredicted RBP20.8■□□□□ 0.92
ETFA-213ENST00000560309 PIGNO95427 931 aa20.8■□□□□ 0.92
ETFA-213ENST00000560309 ALPIP09923 528 aa20.8■□□□□ 0.92
ETFA-213ENST00000560309 AP1S1P61966 158 aa20.8■□□□□ 0.92
ETFA-213ENST00000560309 ELOCQ15369 112 aa20.8■□□□□ 0.92
ETFA-213ENST00000560309 PRRT3Q5FWE3 981 aa20.8■□□□□ 0.92
ETFA-213ENST00000560309 ESRP1Q6NXG1 681 aaKnown RBP20.8■□□□□ 0.92
ETFA-213ENST00000560309 CAMK1DQ8IU85 385 aa20.8■□□□□ 0.92
Retrieved 100 of 20,778 RNA–protein pairs in 21.4 ms