RNA–Protein interactions for RNA: ENST00000559989.1

CSPG4P12-202, Transcript of chondroitin sulfate proteoglycan 4 pseudogene 12, humanhuman

TSL 1 (best) BASIC

Gene CSPG4P12, Length 7,790 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSPG4P12-202ENST00000559989 CYP11B1P15538 503 aa13.93□□□□□ -0.18
CSPG4P12-202ENST00000559989 PVALBP20472 110 aaPredicted RBP13.93□□□□□ -0.18
CSPG4P12-202ENST00000559989 MPPE1Q53F39 396 aa13.93□□□□□ -0.18
CSPG4P12-202ENST00000559989 CLIC5Q9NZA1 410 aa13.93□□□□□ -0.18
CSPG4P12-202ENST00000559989 MGAT1P26572 445 aa13.93□□□□□ -0.18
CSPG4P12-202ENST00000559989 FMR1Q06787 632 aaKnown RBP eCLIP13.93□□□□□ -0.18
CSPG4P12-202ENST00000559989 HIST1H2AAQ96QV6 131 aa13.93□□□□□ -0.18
CSPG4P12-202ENST00000559989 MKLN1Q9UL63 735 aa13.93□□□□□ -0.18
CSPG4P12-202ENST00000559989 SGPL1O95470 568 aa13.93□□□□□ -0.18
CSPG4P12-202ENST00000559989 PPIBP23284 216 aaKnown RBP13.93□□□□□ -0.18
CSPG4P12-202ENST00000559989 SNAPC2Q13487 334 aa13.93□□□□□ -0.18
CSPG4P12-202ENST00000559989 DOK6Q6PKX4 331 aa13.93□□□□□ -0.18
CSPG4P12-202ENST00000559989 ZNF730Q6ZMV8 503 aa13.93□□□□□ -0.18
CSPG4P12-202ENST00000559989 TRAPPC5Q8IUR0 188 aa13.93□□□□□ -0.18
CSPG4P12-202ENST00000559989 GALNT6Q8NCL4 622 aa13.93□□□□□ -0.18
CSPG4P12-202ENST00000559989 ALDH8A1Q9H2A2 487 aaPredicted RBP13.93□□□□□ -0.18
CSPG4P12-202ENST00000559989 TREM1Q9NP99 234 aa13.93□□□□□ -0.18
CSPG4P12-202ENST00000559989 MYMKA6NI61 221 aa13.93□□□□□ -0.18
CSPG4P12-202ENST00000559989 PDCD5O14737 125 aa13.93□□□□□ -0.18
CSPG4P12-202ENST00000559989 FOXN1O15353 648 aa13.93□□□□□ -0.18
CSPG4P12-202ENST00000559989 MAGEC1O60732 1142 aa13.93□□□□□ -0.18
CSPG4P12-202ENST00000559989 CAMTA2O94983 1202 aa13.93□□□□□ -0.18
CSPG4P12-202ENST00000559989 ANPEPP15144 967 aa13.93□□□□□ -0.18
CSPG4P12-202ENST00000559989 SPESP1Q6UW49 350 aa13.93□□□□□ -0.18
CSPG4P12-202ENST00000559989 TMC7Q7Z402 723 aa13.93□□□□□ -0.18
CSPG4P12-202ENST00000559989 ACOT1Q86TX2 421 aa13.93□□□□□ -0.18
CSPG4P12-202ENST00000559989 TMEM17Q86X19 198 aa13.93□□□□□ -0.18
CSPG4P12-202ENST00000559989 TC2NQ8N9U0 490 aa13.93□□□□□ -0.18
CSPG4P12-202ENST00000559989 DNAJB2P25686 324 aa13.93□□□□□ -0.18
CSPG4P12-202ENST00000559989 PON1P27169 355 aa13.93□□□□□ -0.18
CSPG4P12-202ENST00000559989 GNALP38405 381 aa13.93□□□□□ -0.18
CSPG4P12-202ENST00000559989 RASGEF1BQ0VAM2 473 aa13.93□□□□□ -0.18
CSPG4P12-202ENST00000559989 ALX1Q15699 326 aa13.93□□□□□ -0.18
CSPG4P12-202ENST00000559989 GTF2IRD2BQ6EKJ0 949 aa13.93□□□□□ -0.18
CSPG4P12-202ENST00000559989 GTF2IRD2Q86UP8 949 aa13.93□□□□□ -0.18
CSPG4P12-202ENST00000559989 ZDHHC17Q8IUH5 632 aa13.93□□□□□ -0.18
CSPG4P12-202ENST00000559989 MCEMP1Q8IX19 187 aa13.93□□□□□ -0.18
CSPG4P12-202ENST00000559989 PARP8Q8N3A8 854 aa13.93□□□□□ -0.18
CSPG4P12-202ENST00000559989 DPF2Q92785 391 aa13.93□□□□□ -0.18
CSPG4P12-202ENST00000559989 C9IYK1 514 aa13.92□□□□□ -0.18
CSPG4P12-202ENST00000559989 C19orf81C9J6K1 198 aa13.92□□□□□ -0.18
CSPG4P12-202ENST00000559989 C21orf2O43822 256 aa13.92□□□□□ -0.18
CSPG4P12-202ENST00000559989 NTRK1P04629 796 aa13.92□□□□□ -0.18
CSPG4P12-202ENST00000559989 AFF1P51825 1210 aaKnown RBP13.92□□□□□ -0.18
CSPG4P12-202ENST00000559989 GJA9P57773 515 aa13.92□□□□□ -0.18
CSPG4P12-202ENST00000559989 PPP1R13LQ8WUF5 828 aa13.92□□□□□ -0.18
CSPG4P12-202ENST00000559989 GFM1Q96RP9 751 aaKnown RBP13.92□□□□□ -0.18
CSPG4P12-202ENST00000559989 SUV39H1O43463 412 aa13.92□□□□□ -0.18
CSPG4P12-202ENST00000559989 CHRNA5P30532 468 aa13.92□□□□□ -0.18
CSPG4P12-202ENST00000559989 BMPR2Q13873 1038 aa13.92□□□□□ -0.18
CSPG4P12-202ENST00000559989 SLC5A9Q2M3M2 681 aa13.92□□□□□ -0.18
CSPG4P12-202ENST00000559989 COPS4Q9BT78 406 aa13.92□□□□□ -0.18
CSPG4P12-202ENST00000559989 IKZF2Q9UKS7 526 aa13.92□□□□□ -0.18
CSPG4P12-202ENST00000559989 PCDHA11Q9Y5I1 949 aa13.92□□□□□ -0.18
CSPG4P12-202ENST00000559989 ZNF470Q6ECI4 717 aa13.92□□□□□ -0.18
CSPG4P12-202ENST00000559989 GRHL1Q9NZI5 618 aa13.92□□□□□ -0.18
CSPG4P12-202ENST00000559989 B3GAT3O94766 335 aa13.92□□□□□ -0.18
CSPG4P12-202ENST00000559989 SP100P23497 879 aaPredicted RBP13.92□□□□□ -0.18
CSPG4P12-202ENST00000559989 ARCN1P48444 511 aaKnown RBP13.92□□□□□ -0.18
CSPG4P12-202ENST00000559989 CTXN3Q4LDR2 81 aa13.92□□□□□ -0.18
CSPG4P12-202ENST00000559989 STOML3Q8TAV4 291 aa13.92□□□□□ -0.18
CSPG4P12-202ENST00000559989 STAG3L4Q8TBR4 150 aa13.92□□□□□ -0.18
CSPG4P12-202ENST00000559989 PCDHB12Q9Y5F1 795 aa13.92□□□□□ -0.18
CSPG4P12-202ENST00000559989 MPZL2O60487 215 aa13.92□□□□□ -0.18
CSPG4P12-202ENST00000559989 SCN2BO60939 215 aa13.92□□□□□ -0.18
CSPG4P12-202ENST00000559989 GNAO1P09471 354 aa13.92□□□□□ -0.18
CSPG4P12-202ENST00000559989 ACAT1P24752 427 aaKnown RBP13.92□□□□□ -0.18
CSPG4P12-202ENST00000559989 PPM1AP35813 382 aa13.92□□□□□ -0.18
CSPG4P12-202ENST00000559989 DRG2P55039 364 aaKnown RBP13.92□□□□□ -0.18
CSPG4P12-202ENST00000559989 TMEM192Q8IY95 271 aa13.92□□□□□ -0.18
CSPG4P12-202ENST00000559989 EFCAB3Q8N7B9 438 aa13.92□□□□□ -0.18
CSPG4P12-202ENST00000559989 ELMO1Q92556 727 aa13.92□□□□□ -0.18
CSPG4P12-202ENST00000559989 RFKQ969G6 155 aa13.92□□□□□ -0.18
CSPG4P12-202ENST00000559989 CFAP74Q9C0B2 1584 aa13.92□□□□□ -0.18
CSPG4P12-202ENST00000559989 DHRS12A0PJE2 317 aa13.92□□□□□ -0.18
CSPG4P12-202ENST00000559989 CHIAQ9BZP6 476 aa13.92□□□□□ -0.18
CSPG4P12-202ENST00000559989 ELF3P78545 371 aaPredicted RBP13.91□□□□□ -0.18
CSPG4P12-202ENST00000559989 HMBOX1Q6NT76 420 aa13.91□□□□□ -0.18
CSPG4P12-202ENST00000559989 DHDDSQ86SQ9 333 aa13.91□□□□□ -0.18
CSPG4P12-202ENST00000559989 CIR1Q86X95 450 aaPredicted RBP13.91□□□□□ -0.18
CSPG4P12-202ENST00000559989 ERGIC2Q96RQ1 377 aa13.91□□□□□ -0.18
CSPG4P12-202ENST00000559989 DCP1AQ9NPI6 582 aaPredicted RBP13.91□□□□□ -0.18
CSPG4P12-202ENST00000559989 SEMA3GQ9NS98 782 aa13.91□□□□□ -0.18
CSPG4P12-202ENST00000559989 TAS2R7Q9NYW3 318 aa13.91□□□□□ -0.18
CSPG4P12-202ENST00000559989 IFT80Q9P2H3 777 aaPredicted RBP13.91□□□□□ -0.18
CSPG4P12-202ENST00000559989 SASH3O75995 380 aa13.91□□□□□ -0.18
CSPG4P12-202ENST00000559989 SERPINA4P29622 427 aa13.91□□□□□ -0.18
CSPG4P12-202ENST00000559989 HNF4AP41235 474 aa13.91□□□□□ -0.18
CSPG4P12-202ENST00000559989 PTDSS1P48651 473 aaKnown RBP13.91□□□□□ -0.18
CSPG4P12-202ENST00000559989 PFKFB4Q16877 469 aa13.91□□□□□ -0.18
CSPG4P12-202ENST00000559989 ATXN7L2Q5T6C5 722 aaPredicted RBP13.91□□□□□ -0.18
CSPG4P12-202ENST00000559989 OVOS1Q6IE37 1185 aa13.91□□□□□ -0.18
CSPG4P12-202ENST00000559989 GJD3Q8N144 294 aa13.91□□□□□ -0.18
CSPG4P12-202ENST00000559989 OR2L8Q8NGY9 312 aa13.91□□□□□ -0.18
CSPG4P12-202ENST00000559989 TCF12Q99081 682 aa13.91□□□□□ -0.18
CSPG4P12-202ENST00000559989 ENY2Q9NPA8 101 aa13.91□□□□□ -0.18
CSPG4P12-202ENST00000559989 SLC25A27O95847 323 aa13.91□□□□□ -0.18
CSPG4P12-202ENST00000559989 TFPIP10646 304 aa13.91□□□□□ -0.18
CSPG4P12-202ENST00000559989 RASAL3Q86YV0 1011 aa13.91□□□□□ -0.18
CSPG4P12-202ENST00000559989 NKX2-3Q8TAU0 364 aa13.91□□□□□ -0.18
Retrieved 100 of 20,778 RNA–protein pairs in 46.1 ms