RNA–Protein interactions for RNA: ENST00000558739.1

SMAD3-206, Transcript of SMAD family member 3, humanhuman

TSL 3

Gene SMAD3, Length 586 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMAD3-206ENST00000558739 RHOCP08134 193 aa12□□□□□ -0.49
SMAD3-206ENST00000558739 THRAP10827 490 aa12□□□□□ -0.49
SMAD3-206ENST00000558739 VDRP11473 427 aa12□□□□□ -0.49
SMAD3-206ENST00000558739 NR2F2P24468 414 aa12□□□□□ -0.49
SMAD3-206ENST00000558739 CD1CP29017 333 aa12□□□□□ -0.49
SMAD3-206ENST00000558739 CLCN6P51797 869 aa12□□□□□ -0.49
SMAD3-206ENST00000558739 LIMK2P53671 638 aa12□□□□□ -0.49
SMAD3-206ENST00000558739 LRMPQ12912 555 aa12□□□□□ -0.49
SMAD3-206ENST00000558739 NFATC4Q14934 902 aa12□□□□□ -0.49
SMAD3-206ENST00000558739 SLC39A14Q15043 492 aa12□□□□□ -0.49
SMAD3-206ENST00000558739 INPP5JQ15735 1006 aaPredicted RBP12□□□□□ -0.49
SMAD3-206ENST00000558739 EDRF1Q3B7T1 1238 aa12□□□□□ -0.49
SMAD3-206ENST00000558739 C8orf34Q49A92 452 aa12□□□□□ -0.49
SMAD3-206ENST00000558739 CBWD6Q4V339 395 aa12□□□□□ -0.49
SMAD3-206ENST00000558739 CBWD3Q5JTY5 395 aa12□□□□□ -0.49
SMAD3-206ENST00000558739 CBWD5Q5RIA9 395 aa12□□□□□ -0.49
SMAD3-206ENST00000558739 KRT39Q6A163 491 aa12□□□□□ -0.49
SMAD3-206ENST00000558739 SHC4Q6S5L8 630 aa12□□□□□ -0.49
SMAD3-206ENST00000558739 INTS8Q75QN2 995 aaKnown RBP12□□□□□ -0.49
SMAD3-206ENST00000558739 TFAP2DQ7Z6R9 452 aa12□□□□□ -0.49
SMAD3-206ENST00000558739 FAM186BQ8IYM0 893 aa12□□□□□ -0.49
SMAD3-206ENST00000558739 TTC39CQ8N584 583 aa12□□□□□ -0.49
SMAD3-206ENST00000558739 DCAF4L2Q8NA75 395 aa12□□□□□ -0.49
SMAD3-206ENST00000558739 AGBL5Q8NDL9 886 aa12□□□□□ -0.49
SMAD3-206ENST00000558739 PATE1Q8WXA2 126 aa12□□□□□ -0.49
SMAD3-206ENST00000558739 TMEM168Q9H0V1 697 aa12□□□□□ -0.49
SMAD3-206ENST00000558739 CUEDC2Q9H467 287 aa12□□□□□ -0.49
SMAD3-206ENST00000558739 DPEP2Q9H4A9 486 aa12□□□□□ -0.49
SMAD3-206ENST00000558739 CYP4F12Q9HCS2 524 aa12□□□□□ -0.49
SMAD3-206ENST00000558739 ANLNQ9NQW6 1124 aa12□□□□□ -0.49
SMAD3-206ENST00000558739 RCOR3Q9P2K3 495 aaPredicted RBP12□□□□□ -0.49
SMAD3-206ENST00000558739 KCTD3Q9Y597 815 aa12□□□□□ -0.49
SMAD3-206ENST00000558739 OAS3Q9Y6K5 1087 aaKnown RBP12□□□□□ -0.49
SMAD3-206ENST00000558739 RNF225M0QZC1 329 aaPredicted RBP11.99□□□□□ -0.49
SMAD3-206ENST00000558739 CLDN11O75508 207 aa11.99□□□□□ -0.49
SMAD3-206ENST00000558739 ZMPSTE24O75844 475 aa11.99□□□□□ -0.49
SMAD3-206ENST00000558739 UGT2B4P06133 528 aa11.99□□□□□ -0.49
SMAD3-206ENST00000558739 SERPINH1P50454 418 aaKnown RBP11.99□□□□□ -0.49
SMAD3-206ENST00000558739 KRT83P78385 493 aa11.99□□□□□ -0.49
SMAD3-206ENST00000558739 ARF5P84085 180 aa11.99□□□□□ -0.49
SMAD3-206ENST00000558739 ERV3-1Q14264 604 aa11.99□□□□□ -0.49
SMAD3-206ENST00000558739 WSCD2Q2TBF2 565 aa11.99□□□□□ -0.49
SMAD3-206ENST00000558739 DCAF12Q5T6F0 453 aa11.99□□□□□ -0.49
SMAD3-206ENST00000558739 KDELC2Q7Z4H8 507 aa11.99□□□□□ -0.49
SMAD3-206ENST00000558739 ZNF438Q7Z4V0 828 aa11.99□□□□□ -0.49
SMAD3-206ENST00000558739 Q8NA96 180 aa11.99□□□□□ -0.49
SMAD3-206ENST00000558739 ASPSCR1Q9BZE9 553 aa11.99□□□□□ -0.49
SMAD3-206ENST00000558739 ST7Q9NRC1 585 aa11.99□□□□□ -0.49
SMAD3-206ENST00000558739 SPATS2LQ9NUQ6 558 aaKnown RBP11.99□□□□□ -0.49
SMAD3-206ENST00000558739 DDIT4Q9NX09 232 aa11.99□□□□□ -0.49
SMAD3-206ENST00000558739 NBEAL1Q6ZS30 2694 aa11.98□□□□□ -0.49
SMAD3-206ENST00000558739 STAB1Q9NY15 2570 aa11.98□□□□□ -0.49
SMAD3-206ENST00000558739 MDC1Q14676 2089 aaKnown RBP11.98□□□□□ -0.49
SMAD3-206ENST00000558739 PVALEFA0A1B0GWK0 134 aa11.98□□□□□ -0.49
SMAD3-206ENST00000558739 TMEM202A6NGA9 273 aa11.98□□□□□ -0.49
SMAD3-206ENST00000558739 MAPK13O15264 365 aa11.98□□□□□ -0.49
SMAD3-206ENST00000558739 POLR2DO15514 142 aaKnown RBP11.98□□□□□ -0.49
SMAD3-206ENST00000558739 KRT86O43790 486 aa11.98□□□□□ -0.49
SMAD3-206ENST00000558739 PAGE1O75459 146 aa11.98□□□□□ -0.49
SMAD3-206ENST00000558739 TM7SF2O76062 418 aa11.98□□□□□ -0.49
SMAD3-206ENST00000558739 STK17BO94768 372 aa11.98□□□□□ -0.49
SMAD3-206ENST00000558739 KRT13P13646 458 aa11.98□□□□□ -0.49
SMAD3-206ENST00000558739 MAP4P27816 1152 aaKnown RBP11.98□□□□□ -0.49
SMAD3-206ENST00000558739 CSTF2P33240 577 aaKnown RBP eCLIP11.98□□□□□ -0.49
SMAD3-206ENST00000558739 STAT5AP42229 794 aa11.98□□□□□ -0.49
SMAD3-206ENST00000558739 COPB1P53618 953 aaKnown RBP11.98□□□□□ -0.49
SMAD3-206ENST00000558739 PMS2P54278 862 aa11.98□□□□□ -0.49
SMAD3-206ENST00000558739 ABHD18Q0P651 414 aa11.98□□□□□ -0.49
SMAD3-206ENST00000558739 INPP5AQ14642 412 aa11.98□□□□□ -0.49
SMAD3-206ENST00000558739 NR6A1Q15406 480 aa11.98□□□□□ -0.49
SMAD3-206ENST00000558739 CARD16Q5EG05 197 aa11.98□□□□□ -0.49
SMAD3-206ENST00000558739 ARTNQ5T4W7 220 aa11.98□□□□□ -0.49
SMAD3-206ENST00000558739 CPZQ66K79 652 aa11.98□□□□□ -0.49
SMAD3-206ENST00000558739 TMEM270Q6UE05 265 aa11.98□□□□□ -0.49
SMAD3-206ENST00000558739 XYLT1Q86Y38 959 aa11.98□□□□□ -0.49
SMAD3-206ENST00000558739 MCEMP1Q8IX19 187 aa11.98□□□□□ -0.49
SMAD3-206ENST00000558739 TP53INP2Q8IXH6 220 aa11.98□□□□□ -0.49
SMAD3-206ENST00000558739 ZNF683Q8IZ20 524 aa11.98□□□□□ -0.49
SMAD3-206ENST00000558739 IQUBQ8NA54 791 aa11.98□□□□□ -0.49
SMAD3-206ENST00000558739 PLA2G15Q8NCC3 412 aa11.98□□□□□ -0.49
SMAD3-206ENST00000558739 CCDC112Q8NEF3 446 aa11.98□□□□□ -0.49
SMAD3-206ENST00000558739 KAT5Q92993 513 aa11.98□□□□□ -0.49
SMAD3-206ENST00000558739 C19orf60Q96EN9 201 aa11.98□□□□□ -0.49
SMAD3-206ENST00000558739 HSFY1Q96LI6 401 aa11.98□□□□□ -0.49
SMAD3-206ENST00000558739 HAPLN3Q96S86 360 aa11.98□□□□□ -0.49
SMAD3-206ENST00000558739 PPP1R9BQ96SB3 815 aa11.98□□□□□ -0.49
SMAD3-206ENST00000558739 INTS2Q9H0H0 1204 aaKnown RBP11.98□□□□□ -0.49
SMAD3-206ENST00000558739 SIK2Q9H0K1 926 aa11.98□□□□□ -0.49
SMAD3-206ENST00000558739 SLTMQ9NWH9 1034 aaKnown RBP eCLIP11.98□□□□□ -0.49
SMAD3-206ENST00000558739 RRN3Q9NYV6 651 aa11.98□□□□□ -0.49
SMAD3-206ENST00000558739 MPP6Q9NZW5 540 aa11.98□□□□□ -0.49
SMAD3-206ENST00000558739 HECAQ9UBI9 543 aaPredicted RBP11.98□□□□□ -0.49
SMAD3-206ENST00000558739 B4E171 279 aa11.97□□□□□ -0.49
SMAD3-206ENST00000558739 HNRNPRO43390 633 aaKnown RBP11.97□□□□□ -0.49
SMAD3-206ENST00000558739 DLGAP3O95886 979 aa11.97□□□□□ -0.49
SMAD3-206ENST00000558739 CD160O95971 181 aa11.97□□□□□ -0.49
SMAD3-206ENST00000558739 PCCBP05166 539 aa11.97□□□□□ -0.49
SMAD3-206ENST00000558739 CCR1P32246 355 aa11.97□□□□□ -0.49
SMAD3-206ENST00000558739 TSPAN7P41732 249 aa11.97□□□□□ -0.49
SMAD3-206ENST00000558739 RPL34P49207 117 aaKnown RBP11.97□□□□□ -0.49
Retrieved 100 of 20,778 RNA–protein pairs in 38.3 ms