RNA–Protein interactions for RNA: ENST00000558562.1

TMED3-205, Transcript of transmembrane p24 trafficking protein 3, humanhuman

TSL 2

Gene TMED3, Length 938 nt, Biotype processed transcript, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TMED3-205ENST00000558562 TLR5O60602 858 aa13.71□□□□□ -0.21
TMED3-205ENST00000558562 C1QL1O75973 258 aa13.71□□□□□ -0.21
TMED3-205ENST00000558562 STK10O94804 968 aaKnown RBP13.71□□□□□ -0.21
TMED3-205ENST00000558562 CER1O95813 267 aa13.71□□□□□ -0.21
TMED3-205ENST00000558562 SYF2O95926 243 aaKnown RBP13.71□□□□□ -0.21
TMED3-205ENST00000558562 VAV1P15498 845 aa13.71□□□□□ -0.21
TMED3-205ENST00000558562 DGKGP49619 791 aa13.71□□□□□ -0.21
TMED3-205ENST00000558562 BASP1P80723 227 aaKnown RBP13.71□□□□□ -0.21
TMED3-205ENST00000558562 NRG1Q02297 640 aaPredicted RBP13.71□□□□□ -0.21
TMED3-205ENST00000558562 CAMK2BQ13554 666 aa13.71□□□□□ -0.21
TMED3-205ENST00000558562 PRKD1Q15139 912 aaPredicted RBP13.71□□□□□ -0.21
TMED3-205ENST00000558562 MANEALQ5VSG8 457 aa13.71□□□□□ -0.21
TMED3-205ENST00000558562 RWDD4Q6NW29 188 aaKnown RBP13.71□□□□□ -0.21
TMED3-205ENST00000558562 C4orf22Q6V702 233 aa13.71□□□□□ -0.21
TMED3-205ENST00000558562 TRMT10CQ7L0Y3 403 aaKnown RBP13.71□□□□□ -0.21
TMED3-205ENST00000558562 TADA2BQ86TJ2 420 aa13.71□□□□□ -0.21
TMED3-205ENST00000558562 CACUL1Q86Y37 369 aa13.71□□□□□ -0.21
TMED3-205ENST00000558562 TAB3Q8N5C8 712 aaPredicted RBP13.71□□□□□ -0.21
TMED3-205ENST00000558562 ATP6V0D2Q8N8Y2 350 aa13.71□□□□□ -0.21
TMED3-205ENST00000558562 CPT1BQ92523 772 aa13.71□□□□□ -0.21
TMED3-205ENST00000558562 MKRN2Q9H000 416 aaKnown RBP13.71□□□□□ -0.21
TMED3-205ENST00000558562 PABPC3Q9H361 631 aaKnown RBP13.71□□□□□ -0.21
TMED3-205ENST00000558562 CDC42EP4Q9H3Q1 356 aaKnown RBP13.71□□□□□ -0.21
TMED3-205ENST00000558562 PLK2Q9NYY3 685 aa13.71□□□□□ -0.21
TMED3-205ENST00000558562 SLC12A6Q9UHW9 1150 aa13.71□□□□□ -0.21
TMED3-205ENST00000558562 EIF2B4Q9UI10 523 aaKnown RBP13.71□□□□□ -0.21
TMED3-205ENST00000558562 FARP1Q9Y4F1 1045 aaPredicted RBP13.71□□□□□ -0.21
TMED3-205ENST00000558562 SLCO1B1Q9Y6L6 691 aa13.71□□□□□ -0.21
TMED3-205ENST00000558562 STON1Q9Y6Q2 735 aa13.71□□□□□ -0.21
TMED3-205ENST00000558562 MAST4O15021 2626 aa13.71□□□□□ -0.22
TMED3-205ENST00000558562 TENM4Q6N022 2769 aa13.7□□□□□ -0.22
TMED3-205ENST00000558562 FGF10O15520 208 aaPredicted RBP13.7□□□□□ -0.22
TMED3-205ENST00000558562 RIPK2O43353 540 aa13.7□□□□□ -0.22
TMED3-205ENST00000558562 DKK1O94907 266 aa13.7□□□□□ -0.22
TMED3-205ENST00000558562 CISD3P0C7P0 127 aa13.7□□□□□ -0.22
TMED3-205ENST00000558562 ZNF883P0CG24 379 aa13.7□□□□□ -0.22
TMED3-205ENST00000558562 MX2P20592 715 aa13.7□□□□□ -0.22
TMED3-205ENST00000558562 ITPKBP27987 946 aa13.7□□□□□ -0.22
TMED3-205ENST00000558562 CSNK1EP49674 416 aaKnown RBP13.7□□□□□ -0.22
TMED3-205ENST00000558562 TUBP50607 506 aa13.7□□□□□ -0.22
TMED3-205ENST00000558562 TPMTP51580 245 aa13.7□□□□□ -0.22
TMED3-205ENST00000558562 SNX30Q5VWJ9 437 aa13.7□□□□□ -0.22
TMED3-205ENST00000558562 HTR3DQ70Z44 454 aa13.7□□□□□ -0.22
TMED3-205ENST00000558562 GALNT15Q8N3T1 639 aa13.7□□□□□ -0.22
TMED3-205ENST00000558562 NAT8LQ8N9F0 302 aa13.7□□□□□ -0.22
TMED3-205ENST00000558562 NETO2Q8NC67 525 aa13.7□□□□□ -0.22
TMED3-205ENST00000558562 CCDC110Q8TBZ0 833 aa13.7□□□□□ -0.22
TMED3-205ENST00000558562 LRRN4Q8WUT4 740 aa13.7□□□□□ -0.22
TMED3-205ENST00000558562 HTR3CQ8WXA8 447 aa13.7□□□□□ -0.22
TMED3-205ENST00000558562 P2RY11Q96G91 374 aa13.7□□□□□ -0.22
TMED3-205ENST00000558562 PWWP2AQ96N64 755 aa13.7□□□□□ -0.22
TMED3-205ENST00000558562 UBL7Q96S82 380 aaPredicted RBP13.7□□□□□ -0.22
TMED3-205ENST00000558562 CDC6Q99741 560 aa13.7□□□□□ -0.22
TMED3-205ENST00000558562 SH3GL2Q99962 352 aa13.7□□□□□ -0.22
TMED3-205ENST00000558562 EPB41L4BQ9H329 900 aa13.7□□□□□ -0.22
TMED3-205ENST00000558562 CATSPERBQ9H7T0 1116 aa13.7□□□□□ -0.22
TMED3-205ENST00000558562 ITM2CQ9NQX7 267 aa13.7□□□□□ -0.22
TMED3-205ENST00000558562 USP36Q9P275 1121 aaKnown RBP13.7□□□□□ -0.22
TMED3-205ENST00000558562 NEU3Q9UQ49 428 aa13.7□□□□□ -0.22
TMED3-205ENST00000558562 HBS1LQ9Y450 684 aaKnown RBP13.7□□□□□ -0.22
TMED3-205ENST00000558562 HS3ST4Q9Y661 456 aa13.7□□□□□ -0.22
TMED3-205ENST00000558562 CFAP46Q8IYW2 2715 aa13.7□□□□□ -0.22
TMED3-205ENST00000558562 NYNRINQ9P2P1 1898 aaKnown RBP13.7□□□□□ -0.22
TMED3-205ENST00000558562 C5orf60A6NFR6 353 aa13.69□□□□□ -0.22
TMED3-205ENST00000558562 METTL12A8MUP2 240 aa13.69□□□□□ -0.22
TMED3-205ENST00000558562 GOLGA8KD6RF30 607 aa13.69□□□□□ -0.22
TMED3-205ENST00000558562 E9PAM4 449 aa13.69□□□□□ -0.22
TMED3-205ENST00000558562 GFRA2O00451 464 aa13.69□□□□□ -0.22
TMED3-205ENST00000558562 FLRT2O43155 660 aa13.69□□□□□ -0.22
TMED3-205ENST00000558562 GCATO75600 419 aa13.69□□□□□ -0.22
TMED3-205ENST00000558562 IGLV3-27P01718 113 aa13.69□□□□□ -0.22
TMED3-205ENST00000558562 HMBSP08397 361 aa13.69□□□□□ -0.22
TMED3-205ENST00000558562 NUDT17P0C025 328 aa13.69□□□□□ -0.22
TMED3-205ENST00000558562 ABCG1P45844 678 aa13.69□□□□□ -0.22
TMED3-205ENST00000558562 EIF3BP55884 814 aaKnown RBP13.69□□□□□ -0.22
TMED3-205ENST00000558562 CBX1P83916 185 aa13.69□□□□□ -0.22
TMED3-205ENST00000558562 IFFO1Q0D2I5 559 aa13.69□□□□□ -0.22
TMED3-205ENST00000558562 AP1B1Q10567 949 aa13.69□□□□□ -0.22
TMED3-205ENST00000558562 STARD3Q14849 445 aa13.69□□□□□ -0.22
TMED3-205ENST00000558562 CEP85LQ5SZL2 805 aa13.69□□□□□ -0.22
TMED3-205ENST00000558562 PIK3R6Q5UE93 754 aa13.69□□□□□ -0.22
TMED3-205ENST00000558562 ANKRD22Q5VYY1 191 aa13.69□□□□□ -0.22
TMED3-205ENST00000558562 IL27RAQ6UWB1 636 aa13.69□□□□□ -0.22
TMED3-205ENST00000558562 DBX2Q6ZNG2 339 aa13.69□□□□□ -0.22
TMED3-205ENST00000558562 ARHGEF18Q6ZSZ5 1173 aa13.69□□□□□ -0.22
TMED3-205ENST00000558562 FAM124AQ86V42 546 aa13.69□□□□□ -0.22
TMED3-205ENST00000558562 ZNF276Q8N554 614 aa13.69□□□□□ -0.22
TMED3-205ENST00000558562 NPWQ8N729 165 aa13.69□□□□□ -0.22
TMED3-205ENST00000558562 CCNYQ8ND76 341 aa13.69□□□□□ -0.22
TMED3-205ENST00000558562 CADM4Q8NFZ8 388 aa13.69□□□□□ -0.22
TMED3-205ENST00000558562 OR2W6PQ8NHA6 318 aa13.69□□□□□ -0.22
TMED3-205ENST00000558562 SLC39A7Q92504 469 aa13.69□□□□□ -0.22
TMED3-205ENST00000558562 SNX19Q92543 992 aa13.69□□□□□ -0.22
TMED3-205ENST00000558562 BTN2A3PQ96KV6 586 aa13.69□□□□□ -0.22
TMED3-205ENST00000558562 SPATA13Q96N96 652 aa13.69□□□□□ -0.22
TMED3-205ENST00000558562 RBM15Q96T37 977 aaKnown RBP eCLIP13.69□□□□□ -0.22
TMED3-205ENST00000558562 LGMNQ99538 433 aa13.69□□□□□ -0.22
TMED3-205ENST00000558562 KLF16Q9BXK1 252 aaPredicted RBP13.69□□□□□ -0.22
TMED3-205ENST00000558562 KLC2Q9H0B6 622 aa13.69□□□□□ -0.22
TMED3-205ENST00000558562 BRD8Q9H0E9 1235 aa13.69□□□□□ -0.22
Retrieved 100 of 20,778 RNA–protein pairs in 118 ms