RNA–Protein interactions for RNA: ENST00000558324.1

HERC1-202, Transcript of HECT and RLD domain containing E3 ubiquitin protein ligase family member 1, humanhuman

TSL 5

Gene HERC1, Length 828 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HERC1-202ENST00000558324 IL10RBQ08334 325 aa12.03□□□□□ -0.48
HERC1-202ENST00000558324 ELP6Q0PNE2 266 aa12.03□□□□□ -0.48
HERC1-202ENST00000558324 CAMK2BQ13554 666 aa12.03□□□□□ -0.48
HERC1-202ENST00000558324 GRM3Q14832 879 aa12.03□□□□□ -0.48
HERC1-202ENST00000558324 IRF4Q15306 451 aa12.03□□□□□ -0.48
HERC1-202ENST00000558324 DPYSL2Q16555 572 aa12.03□□□□□ -0.48
HERC1-202ENST00000558324 UGP2Q16851 508 aa12.03□□□□□ -0.48
HERC1-202ENST00000558324 CCDC122Q5T0U0 273 aa12.03□□□□□ -0.48
HERC1-202ENST00000558324 ERAP2Q6P179 960 aa12.03□□□□□ -0.48
HERC1-202ENST00000558324 TMCO3Q6UWJ1 677 aa12.03□□□□□ -0.48
HERC1-202ENST00000558324 ZSWIM9Q86XI8 627 aa12.03□□□□□ -0.48
HERC1-202ENST00000558324 RBFAQ8N0V3 343 aa12.03□□□□□ -0.48
HERC1-202ENST00000558324 LMX1AQ8TE12 382 aa12.03□□□□□ -0.48
HERC1-202ENST00000558324 ASB12Q8WXK4 309 aa12.03□□□□□ -0.48
HERC1-202ENST00000558324 IFT43Q96FT9 208 aa12.03□□□□□ -0.48
HERC1-202ENST00000558324 APOLD1Q96LR9 279 aa12.03□□□□□ -0.48
HERC1-202ENST00000558324 ZNF641Q96N77 438 aaPredicted RBP12.03□□□□□ -0.48
HERC1-202ENST00000558324 CSPG4P5Q96PW8 444 aa12.03□□□□□ -0.48
HERC1-202ENST00000558324 C1QTNF7Q9BXJ2 289 aa12.03□□□□□ -0.48
HERC1-202ENST00000558324 TCEAL2Q9H3H9 227 aaPredicted RBP12.03□□□□□ -0.48
HERC1-202ENST00000558324 ATP13A3Q9H7F0 1226 aa12.03□□□□□ -0.48
HERC1-202ENST00000558324 ETNK2Q9NVF9 386 aa12.03□□□□□ -0.48
HERC1-202ENST00000558324 NLGN3Q9NZ94 848 aa12.03□□□□□ -0.48
HERC1-202ENST00000558324 IP6K2Q9UHH9 426 aa12.03□□□□□ -0.48
HERC1-202ENST00000558324 RAXQ9Y2V3 346 aa12.03□□□□□ -0.48
HERC1-202ENST00000558324 TSPAN11A1L157 253 aa12.02□□□□□ -0.49
HERC1-202ENST00000558324 TTC24A2A3L6 582 aaPredicted RBP12.02□□□□□ -0.49
HERC1-202ENST00000558324 NEMP2A6NFY4 417 aa12.02□□□□□ -0.49
HERC1-202ENST00000558324 K7ESM1 405 aa12.02□□□□□ -0.49
HERC1-202ENST00000558324 SCAMP1O15126 338 aa12.02□□□□□ -0.49
HERC1-202ENST00000558324 CYP1A2P05177 515 aa12.02□□□□□ -0.49
HERC1-202ENST00000558324 TPM3P06753 285 aa12.02□□□□□ -0.49
HERC1-202ENST00000558324 GIMD1P0DJR0 217 aa12.02□□□□□ -0.49
HERC1-202ENST00000558324 CDK4P11802 303 aa12.02□□□□□ -0.49
HERC1-202ENST00000558324 C6P13671 934 aa12.02□□□□□ -0.49
HERC1-202ENST00000558324 ACP1P24666 158 aa12.02□□□□□ -0.49
HERC1-202ENST00000558324 MMP12P39900 470 aa12.02□□□□□ -0.49
HERC1-202ENST00000558324 HCAR3P49019 387 aa12.02□□□□□ -0.49
HERC1-202ENST00000558324 LIG3P49916 1009 aa12.02□□□□□ -0.49
HERC1-202ENST00000558324 SCNN1BP51168 640 aa12.02□□□□□ -0.49
HERC1-202ENST00000558324 ZNF135P52742 658 aaPredicted RBP12.02□□□□□ -0.49
HERC1-202ENST00000558324 SLC25A11Q02978 314 aaKnown RBP12.02□□□□□ -0.49
HERC1-202ENST00000558324 BCL2L1Q07817 233 aa12.02□□□□□ -0.49
HERC1-202ENST00000558324 SLC10A7Q0GE19 358 aa12.02□□□□□ -0.49
HERC1-202ENST00000558324 EIF2B5Q13144 721 aaKnown RBP12.02□□□□□ -0.49
HERC1-202ENST00000558324 TARDBPQ13148 414 aaKnown RBP eCLIP12.02□□□□□ -0.496e-10■■■■■ 35.5
HERC1-202ENST00000558324 ILKQ13418 452 aa12.02□□□□□ -0.49
HERC1-202ENST00000558324 PIGHQ14442 188 aaPredicted RBP12.02□□□□□ -0.49
HERC1-202ENST00000558324 KRT81Q14533 505 aa12.02□□□□□ -0.49
HERC1-202ENST00000558324 ZNF235Q14590 738 aa12.02□□□□□ -0.49
HERC1-202ENST00000558324 LBRQ14739 615 aaKnown RBP12.02□□□□□ -0.49
HERC1-202ENST00000558324 ACAP1Q15027 740 aa12.02□□□□□ -0.49
HERC1-202ENST00000558324 TCEA2Q15560 299 aa12.02□□□□□ -0.49
HERC1-202ENST00000558324 DEFB133Q30KQ1 61 aa12.02□□□□□ -0.49
HERC1-202ENST00000558324 TMEM52BQ4KMG9 183 aa12.02□□□□□ -0.49
HERC1-202ENST00000558324 BOLA3Q53S33 107 aa12.02□□□□□ -0.49
HERC1-202ENST00000558324 TMCO4Q5TGY1 634 aa12.02□□□□□ -0.49
HERC1-202ENST00000558324 ALKBH5Q6P6C2 394 aaKnown RBP12.02□□□□□ -0.49
HERC1-202ENST00000558324 BRAT1Q6PJG6 821 aa12.02□□□□□ -0.49
HERC1-202ENST00000558324 C19orf48Q6RUI8 117 aa12.02□□□□□ -0.49
HERC1-202ENST00000558324 POLNQ7Z5Q5 900 aa12.02□□□□□ -0.49
HERC1-202ENST00000558324 CPNE8Q86YQ8 564 aa12.02□□□□□ -0.49
HERC1-202ENST00000558324 PDCD7Q8N8D1 485 aaKnown RBP12.02□□□□□ -0.49
HERC1-202ENST00000558324 TP53I13Q8NBR0 393 aaPredicted RBP12.02□□□□□ -0.49
HERC1-202ENST00000558324 IQCDQ96DY2 449 aa12.02□□□□□ -0.49
HERC1-202ENST00000558324 TUBGCP5Q96RT8 1024 aa12.02□□□□□ -0.49
HERC1-202ENST00000558324 PCDH18Q9HCL0 1135 aa12.02□□□□□ -0.49
HERC1-202ENST00000558324 ATP8A1Q9Y2Q0 1164 aa12.02□□□□□ -0.49
HERC1-202ENST00000558324 TRPM6Q9BX84 2022 aa12.02□□□□□ -0.49
HERC1-202ENST00000558324 A8MX80 341 aa12.01□□□□□ -0.49
HERC1-202ENST00000558324 RIOK3O14730 519 aaKnown RBP12.01□□□□□ -0.49
HERC1-202ENST00000558324 AQP9O43315 295 aa12.01□□□□□ -0.49
HERC1-202ENST00000558324 LZTS3O60299 673 aaPredicted RBP12.01□□□□□ -0.49
HERC1-202ENST00000558324 PCCBP05166 539 aa12.01□□□□□ -0.49
HERC1-202ENST00000558324 CKMT1AP12532 417 aa12.01□□□□□ -0.49
HERC1-202ENST00000558324 EIF4A3P38919 411 aaKnown RBP12.01□□□□□ -0.49
HERC1-202ENST00000558324 CSNK1DP48730 415 aa12.01□□□□□ -0.49
HERC1-202ENST00000558324 SUOXP51687 545 aa12.01□□□□□ -0.49
HERC1-202ENST00000558324 CDH6P55285 790 aa12.01□□□□□ -0.49
HERC1-202ENST00000558324 INSM1Q01101 510 aaPredicted RBP12.01□□□□□ -0.49
HERC1-202ENST00000558324 C1orf61Q13536 156 aa12.01□□□□□ -0.49
HERC1-202ENST00000558324 PTK2BQ14289 1009 aa12.01□□□□□ -0.49
HERC1-202ENST00000558324 RFTN1Q14699 578 aaPredicted RBP12.01□□□□□ -0.49
HERC1-202ENST00000558324 LRRC14Q15048 493 aa12.01□□□□□ -0.49
HERC1-202ENST00000558324 WSCD2Q2TBF2 565 aa12.01□□□□□ -0.49
HERC1-202ENST00000558324 PRRT3Q5FWE3 981 aa12.01□□□□□ -0.49
HERC1-202ENST00000558324 FAXCQ5TGI0 409 aa12.01□□□□□ -0.49
HERC1-202ENST00000558324 PHACTR4Q8IZ21 702 aa12.01□□□□□ -0.49
HERC1-202ENST00000558324 ATPAF2Q8N5M1 289 aa12.01□□□□□ -0.49
HERC1-202ENST00000558324 LZTR1Q8N653 840 aa12.01□□□□□ -0.49
HERC1-202ENST00000558324 NIPA2Q8N8Q9 360 aa12.01□□□□□ -0.49
HERC1-202ENST00000558324 ZNF564Q8TBZ8 553 aaPredicted RBP12.01□□□□□ -0.49
HERC1-202ENST00000558324 HCAR2Q8TDS4 363 aa12.01□□□□□ -0.49
HERC1-202ENST00000558324 PDCD6IPQ8WUM4 868 aaKnown RBP12.01□□□□□ -0.49
HERC1-202ENST00000558324 TEKT4Q8WW24 435 aa12.01□□□□□ -0.49
HERC1-202ENST00000558324 NXPE2Q96DL1 559 aa12.01□□□□□ -0.49
HERC1-202ENST00000558324 NSMCE3Q96MG7 304 aa12.01□□□□□ -0.49
HERC1-202ENST00000558324 CTTNBP2NLQ9P2B4 639 aa12.01□□□□□ -0.49
HERC1-202ENST00000558324 SEPT3Q9UH03 358 aa12.01□□□□□ -0.49
HERC1-202ENST00000558324 APOBEC3BQ9UH17 382 aaKnown RBP12.01□□□□□ -0.49
Retrieved 100 of 20,778 RNA–protein pairs in 32.8 ms