RNA–Protein interactions for RNA: ENST00000558155.1

SPG11-208, Transcript of SPG11, spatacsin vesicle trafficking associated, humanhuman

TSL 5

Gene SPG11, Length 571 nt, Biotype nonsense mediated decay, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPG11-208ENST00000558155 FOXD4L4Q8WXT5 416 aaPredicted RBP5.25□□□□□ -1.57
SPG11-208ENST00000558155 MIB2Q96AX9 1013 aa5.25□□□□□ -1.57
SPG11-208ENST00000558155 ISG20Q96AZ6 181 aaKnown RBP5.25□□□□□ -1.57
SPG11-208ENST00000558155 ABHD17AQ96GS6 310 aa5.25□□□□□ -1.57
SPG11-208ENST00000558155 CCDC34Q96HJ3 373 aa5.25□□□□□ -1.57
SPG11-208ENST00000558155 C1orf74Q96LT6 269 aa5.25□□□□□ -1.57
SPG11-208ENST00000558155 ASPSCR1Q9BZE9 553 aa5.25□□□□□ -1.57
SPG11-208ENST00000558155 ZDHHC6Q9H6R6 413 aa5.25□□□□□ -1.57
SPG11-208ENST00000558155 TMPRSS4Q9NRS4 437 aa5.25□□□□□ -1.57
SPG11-208ENST00000558155 KCNK4Q9NYG8 393 aa5.25□□□□□ -1.57
SPG11-208ENST00000558155 RRN3Q9NYV6 651 aa5.25□□□□□ -1.57
SPG11-208ENST00000558155 LRIT1Q9P2V4 623 aa5.25□□□□□ -1.57
SPG11-208ENST00000558155 GGT7Q9UJ14 662 aa5.25□□□□□ -1.57
SPG11-208ENST00000558155 PCDHGA3Q9Y5H0 932 aa5.25□□□□□ -1.57
SPG11-208ENST00000558155 USP9XQ93008 2570 aaPredicted RBP5.25□□□□□ -1.57
SPG11-208ENST00000558155 LOC100996750A0A140TA64 210 aa5.24□□□□□ -1.57
SPG11-208ENST00000558155 CXorf51AA0A1B0GTR3 108 aa5.24□□□□□ -1.57
SPG11-208ENST00000558155 KRIT1O00522 736 aa5.24□□□□□ -1.57
SPG11-208ENST00000558155 HGSO14964 777 aaPredicted RBP5.24□□□□□ -1.57
SPG11-208ENST00000558155 MTSS1O43312 755 aa5.24□□□□□ -1.57
SPG11-208ENST00000558155 THAP12O43422 761 aa5.24□□□□□ -1.57
SPG11-208ENST00000558155 B4GAT1O43505 415 aa5.24□□□□□ -1.57
SPG11-208ENST00000558155 NUDT21O43809 227 aaKnown RBP5.24□□□□□ -1.57
SPG11-208ENST00000558155 VPS4BO75351 444 aa5.24□□□□□ -1.57
SPG11-208ENST00000558155 GRAP2O75791 330 aa5.24□□□□□ -1.57
SPG11-208ENST00000558155 ZMPSTE24O75844 475 aa5.24□□□□□ -1.57
SPG11-208ENST00000558155 AGFG2O95081 481 aa5.24□□□□□ -1.57
SPG11-208ENST00000558155 LETM1O95202 739 aaPredicted RBP5.24□□□□□ -1.57
SPG11-208ENST00000558155 CALCAP01258 141 aa5.24□□□□□ -1.57
SPG11-208ENST00000558155 CELA2BP08218 269 aaPredicted RBP5.24□□□□□ -1.57
SPG11-208ENST00000558155 CCL4P13236 92 aa5.24□□□□□ -1.57
SPG11-208ENST00000558155 KRT5P13647 590 aa5.24□□□□□ -1.57
SPG11-208ENST00000558155 LIFP15018 202 aa5.24□□□□□ -1.57
SPG11-208ENST00000558155 PFKFB1P16118 471 aa5.24□□□□□ -1.57
SPG11-208ENST00000558155 XPAP23025 273 aaPredicted RBP5.24□□□□□ -1.57
SPG11-208ENST00000558155 MAP4P27816 1152 aaKnown RBP5.24□□□□□ -1.57
SPG11-208ENST00000558155 UGT1A3P35503 534 aa5.24□□□□□ -1.57
SPG11-208ENST00000558155 IGFALSP35858 605 aa5.24□□□□□ -1.57
SPG11-208ENST00000558155 ETFBP38117 255 aa5.24□□□□□ -1.57
SPG11-208ENST00000558155 ABL2P42684 1182 aa5.24□□□□□ -1.57
SPG11-208ENST00000558155 SMCPP49901 116 aaPredicted RBP5.24□□□□□ -1.57
SPG11-208ENST00000558155 IRAK1P51617 712 aa5.24□□□□□ -1.57
SPG11-208ENST00000558155 SUOXP51687 545 aa5.24□□□□□ -1.57
SPG11-208ENST00000558155 GEMIN4P57678 1058 aaKnown RBP5.24□□□□□ -1.57
SPG11-208ENST00000558155 GCNT1Q02742 428 aa5.24□□□□□ -1.57
SPG11-208ENST00000558155 KLRB1Q12918 225 aa5.24□□□□□ -1.57
SPG11-208ENST00000558155 BIRC2Q13490 618 aa5.24□□□□□ -1.57
SPG11-208ENST00000558155 TRA2AQ13595 282 aaKnown RBP eCLIP5.24□□□□□ -1.57
SPG11-208ENST00000558155 C16orf72Q14CZ0 275 aa5.24□□□□□ -1.57
SPG11-208ENST00000558155 LRRC14Q15048 493 aa5.24□□□□□ -1.57
SPG11-208ENST00000558155 ALG11Q2TAA5 492 aa5.24□□□□□ -1.57
SPG11-208ENST00000558155 KLHL40Q2TBA0 621 aa5.24□□□□□ -1.57
SPG11-208ENST00000558155 MYLK3Q32MK0 819 aa5.24□□□□□ -1.57
SPG11-208ENST00000558155 MAP9Q49MG5 647 aa5.24□□□□□ -1.57
SPG11-208ENST00000558155 C14orf28Q4W4Y0 310 aa5.24□□□□□ -1.57
SPG11-208ENST00000558155 LACTB2Q53H82 288 aaPredicted RBP5.24□□□□□ -1.57
SPG11-208ENST00000558155 BRMS1LQ5PSV4 323 aa5.24□□□□□ -1.57
SPG11-208ENST00000558155 CERCAMQ5T4B2 595 aa5.24□□□□□ -1.57
SPG11-208ENST00000558155 ANKRD40Q6AI12 368 aa5.24□□□□□ -1.57
SPG11-208ENST00000558155 C11orf57Q6ZUT1 292 aaPredicted RBP5.24□□□□□ -1.57
SPG11-208ENST00000558155 SPRED1Q7Z699 444 aa5.24□□□□□ -1.57
SPG11-208ENST00000558155 IRF2BP1Q8IU81 584 aa5.24□□□□□ -1.57
SPG11-208ENST00000558155 SLITRK4Q8IW52 837 aa5.24□□□□□ -1.57
SPG11-208ENST00000558155 CACNA2D3Q8IZS8 1091 aa5.24□□□□□ -1.57
SPG11-208ENST00000558155 TP53I13Q8NBR0 393 aaPredicted RBP5.24□□□□□ -1.57
SPG11-208ENST00000558155 EHBP1Q8NDI1 1231 aa5.24□□□□□ -1.57
SPG11-208ENST00000558155 OR7D4Q8NG98 312 aa5.24□□□□□ -1.57
SPG11-208ENST00000558155 SLC35C1Q96A29 364 aa5.24□□□□□ -1.57
SPG11-208ENST00000558155 KIAA1143Q96AT1 154 aaPredicted RBP5.24□□□□□ -1.57
SPG11-208ENST00000558155 SLC45A3Q96JT2 553 aa5.24□□□□□ -1.57
SPG11-208ENST00000558155 WDR92Q96MX6 357 aa5.24□□□□□ -1.57
SPG11-208ENST00000558155 KLHL32Q96NJ5 620 aa5.24□□□□□ -1.57
SPG11-208ENST00000558155 SLC2A13Q96QE2 648 aa5.24□□□□□ -1.57
SPG11-208ENST00000558155 RBM15Q96T37 977 aaKnown RBP eCLIP5.24□□□□□ -1.57
SPG11-208ENST00000558155 APOOQ9BUR5 198 aa5.24□□□□□ -1.57
SPG11-208ENST00000558155 OSBPL1AQ9BXW6 950 aa5.24□□□□□ -1.57
SPG11-208ENST00000558155 KRTAP4-6Q9BYQ5 205 aa5.24□□□□□ -1.57
SPG11-208ENST00000558155 TKTL2Q9H0I9 626 aa5.24□□□□□ -1.57
SPG11-208ENST00000558155 SEMA6CQ9H3T2 930 aa5.24□□□□□ -1.57
SPG11-208ENST00000558155 DPEP2Q9H4A9 486 aa5.24□□□□□ -1.57
SPG11-208ENST00000558155 ATP13A1Q9HD20 1204 aa5.24□□□□□ -1.57
SPG11-208ENST00000558155 MBNL1Q9NR56 388 aaKnown RBP5.24□□□□□ -1.57
SPG11-208ENST00000558155 ARHGEF38Q9NXL2 777 aa5.24□□□□□ -1.57
SPG11-208ENST00000558155 MPP6Q9NZW5 540 aa5.24□□□□□ -1.57
SPG11-208ENST00000558155 KLQ9UEF7 1012 aa5.24□□□□□ -1.57
SPG11-208ENST00000558155 PNMA8BQ9ULN7 279 aaPredicted RBP5.24□□□□□ -1.57
SPG11-208ENST00000558155 HPCAL4Q9UM19 191 aa5.24□□□□□ -1.57
SPG11-208ENST00000558155 VPS4AQ9UN37 437 aa5.24□□□□□ -1.57
SPG11-208ENST00000558155 CNTN6Q9UQ52 1028 aa5.24□□□□□ -1.57
SPG11-208ENST00000558155 FCF1Q9Y324 198 aaKnown RBP5.24□□□□□ -1.57
SPG11-208ENST00000558155 DGKBQ9Y6T7 804 aa5.24□□□□□ -1.57
SPG11-208ENST00000558155 SPTAN1Q13813 2472 aaKnown RBP5.24□□□□□ -1.57
SPG11-208ENST00000558155 TLN1Q9Y490 2541 aaKnown RBP5.24□□□□□ -1.57
SPG11-208ENST00000558155 CHD5Q8TDI0 1954 aa5.24□□□□□ -1.57
SPG11-208ENST00000558155 ARHGEF17Q96PE2 2063 aaPredicted RBP5.24□□□□□ -1.57
SPG11-208ENST00000558155 SDK2Q58EX2 2172 aa5.23□□□□□ -1.57
SPG11-208ENST00000558155 PRR19A6NJB7 356 aa5.23□□□□□ -1.57
SPG11-208ENST00000558155 EFCAB7A8K855 629 aa5.23□□□□□ -1.57
SPG11-208ENST00000558155 RHPN2P1A8MT19 583 aa5.23□□□□□ -1.57
SPG11-208ENST00000558155 CACNB4O00305 520 aaPredicted RBP5.23□□□□□ -1.57
Retrieved 100 of 20,778 RNA–protein pairs in 24.6 ms