RNA–Protein interactions for RNA: ENST00000558072.5

TPM1-209, Transcript of tropomyosin 1, humanhuman

TSL 2

Gene TPM1, Length 525 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TPM1-209ENST00000558072 MMP2P08253 660 aa12.51□□□□□ -0.41
TPM1-209ENST00000558072 XPAP23025 273 aaPredicted RBP12.51□□□□□ -0.41
TPM1-209ENST00000558072 PHBP35232 272 aa12.51□□□□□ -0.41
TPM1-209ENST00000558072 ADRA1AP35348 466 aa12.51□□□□□ -0.41
TPM1-209ENST00000558072 WASP42768 502 aa12.51□□□□□ -0.41
TPM1-209ENST00000558072 ZBTB16Q05516 673 aa12.51□□□□□ -0.41
TPM1-209ENST00000558072 SLC1A5Q15758 541 aa12.51□□□□□ -0.41
TPM1-209ENST00000558072 ZNF805Q5CZA5 627 aa12.51□□□□□ -0.41
TPM1-209ENST00000558072 ATXN7L2Q5T6C5 722 aaPredicted RBP12.51□□□□□ -0.41
TPM1-209ENST00000558072 PKN3Q6P5Z2 889 aa12.51□□□□□ -0.41
TPM1-209ENST00000558072 ZDHHC24Q6UX98 284 aa12.51□□□□□ -0.41
TPM1-209ENST00000558072 USP45Q70EL2 814 aa12.51□□□□□ -0.41
TPM1-209ENST00000558072 RAVER1Q8IY67 606 aaKnown RBP12.51□□□□□ -0.41
TPM1-209ENST00000558072 PYROXD1Q8WU10 500 aa12.51□□□□□ -0.41
TPM1-209ENST00000558072 PTPRN2Q92932 1015 aa12.51□□□□□ -0.41
TPM1-209ENST00000558072 CAVIN3Q969G5 261 aa12.51□□□□□ -0.41
TPM1-209ENST00000558072 RAB7BQ96AH8 199 aa12.51□□□□□ -0.41
TPM1-209ENST00000558072 RMDN1Q96DB5 314 aa12.51□□□□□ -0.41
TPM1-209ENST00000558072 MYO19Q96H55 970 aa12.51□□□□□ -0.41
TPM1-209ENST00000558072 EXOC2Q96KP1 924 aa12.51□□□□□ -0.41
TPM1-209ENST00000558072 MRGPRX2Q96LB1 330 aa12.51□□□□□ -0.41
TPM1-209ENST00000558072 ACOX2Q99424 681 aa12.51□□□□□ -0.41
TPM1-209ENST00000558072 GABRG3Q99928 467 aa12.51□□□□□ -0.41
TPM1-209ENST00000558072 MLPHQ9BV36 600 aaPredicted RBP12.51□□□□□ -0.41
TPM1-209ENST00000558072 FICDQ9BVA6 458 aa12.51□□□□□ -0.41
TPM1-209ENST00000558072 TNKS2Q9H2K2 1166 aa12.51□□□□□ -0.41
TPM1-209ENST00000558072 ZDHHC6Q9H6R6 413 aa12.51□□□□□ -0.41
TPM1-209ENST00000558072 HEATR9A2RTY3 570 aa12.5□□□□□ -0.41
TPM1-209ENST00000558072 CHURC1-FNTBB4DL54 471 aa12.5□□□□□ -0.41
TPM1-209ENST00000558072 ANKRD66B4E2M5 251 aa12.5□□□□□ -0.41
TPM1-209ENST00000558072 BNIP3LO60238 219 aa12.5□□□□□ -0.41
TPM1-209ENST00000558072 PGLSO95336 258 aa12.5□□□□□ -0.41
TPM1-209ENST00000558072 CPP00450 1065 aa12.5□□□□□ -0.41
TPM1-209ENST00000558072 CHRM1P11229 460 aaPredicted RBP12.5□□□□□ -0.41
TPM1-209ENST00000558072 CYP2A6P11509 494 aaPredicted RBP12.5□□□□□ -0.41
TPM1-209ENST00000558072 PAMP19021 973 aa12.5□□□□□ -0.41
TPM1-209ENST00000558072 ADRA1DP25100 572 aa12.5□□□□□ -0.41
TPM1-209ENST00000558072 TARSP26639 723 aaKnown RBP12.5□□□□□ -0.41
TPM1-209ENST00000558072 TIE1P35590 1138 aa12.5□□□□□ -0.41
TPM1-209ENST00000558072 IL12RB1P42701 662 aa12.5□□□□□ -0.41
TPM1-209ENST00000558072 ZXDAP98168 799 aa12.5□□□□□ -0.41
TPM1-209ENST00000558072 ILF2Q12905 390 aaKnown RBP12.5□□□□□ -0.41
TPM1-209ENST00000558072 PDIA2Q13087 525 aaKnown RBP12.5□□□□□ -0.41
TPM1-209ENST00000558072 CAMK2GQ13555 558 aaPredicted RBP12.5□□□□□ -0.41
TPM1-209ENST00000558072 CCINQ13939 588 aa12.5□□□□□ -0.41
TPM1-209ENST00000558072 PCSK7Q16549 785 aa12.5□□□□□ -0.41
TPM1-209ENST00000558072 CCDC38Q502W7 563 aa12.5□□□□□ -0.41
TPM1-209ENST00000558072 PCID2Q5JVF3 399 aa12.5□□□□□ -0.41
TPM1-209ENST00000558072 C9orf64Q5T6V5 341 aa12.5□□□□□ -0.41
TPM1-209ENST00000558072 ZDHHC20Q5W0Z9 365 aa12.5□□□□□ -0.41
TPM1-209ENST00000558072 EGFLAMQ63HQ2 1017 aa12.5□□□□□ -0.41
TPM1-209ENST00000558072 Q6ZS52 159 aa12.5□□□□□ -0.41
TPM1-209ENST00000558072 CCDC25Q86WR0 208 aa12.5□□□□□ -0.41
TPM1-209ENST00000558072 PALM2Q8IXS6 379 aa12.5□□□□□ -0.41
TPM1-209ENST00000558072 TAB3Q8N5C8 712 aaPredicted RBP12.5□□□□□ -0.41
TPM1-209ENST00000558072 ZC3H8Q8N5P1 291 aaKnown RBP eCLIP12.5□□□□□ -0.41
TPM1-209ENST00000558072 PPHLN1Q8NEY8 458 aaKnown RBP12.5□□□□□ -0.41
TPM1-209ENST00000558072 OR2T3Q8NH03 318 aa12.5□□□□□ -0.41
TPM1-209ENST00000558072 ECHDC3Q96DC8 303 aa12.5□□□□□ -0.41
TPM1-209ENST00000558072 ZNF419Q96HQ0 510 aaPredicted RBP12.5□□□□□ -0.41
TPM1-209ENST00000558072 RANBP9Q96S59 729 aa12.5□□□□□ -0.41
TPM1-209ENST00000558072 CCDC77Q9BR77 488 aa12.5□□□□□ -0.41
TPM1-209ENST00000558072 MRM3Q9HC36 420 aaKnown RBP12.5□□□□□ -0.41
TPM1-209ENST00000558072 MAGEE1Q9HCI5 957 aa12.5□□□□□ -0.41
TPM1-209ENST00000558072 POLMQ9NP87 494 aaPredicted RBP12.5□□□□□ -0.41
TPM1-209ENST00000558072 UBP1Q9NZI7 540 aa12.5□□□□□ -0.41
TPM1-209ENST00000558072 RIMKLBQ9ULI2 386 aa12.5□□□□□ -0.41
TPM1-209ENST00000558072 F5P12259 2224 aa12.49□□□□□ -0.41
TPM1-209ENST00000558072 ATG2BQ96BY7 2078 aa12.49□□□□□ -0.41
TPM1-209ENST00000558072 TSPAN11A1L157 253 aa12.49□□□□□ -0.41
TPM1-209ENST00000558072 C2orf81A6NN90 581 aa12.49□□□□□ -0.41
TPM1-209ENST00000558072 F5H423 210 aaPredicted RBP12.49□□□□□ -0.41
TPM1-209ENST00000558072 GOLGA8MH3BSY2 632 aa12.49□□□□□ -0.41
TPM1-209ENST00000558072 FZD6O60353 706 aa12.49□□□□□ -0.41
TPM1-209ENST00000558072 SIN3BO75182 1162 aa12.49□□□□□ -0.41
TPM1-209ENST00000558072 GJB3O75712 270 aa12.49□□□□□ -0.41
TPM1-209ENST00000558072 ALDH1A2O94788 518 aa12.49□□□□□ -0.41
TPM1-209ENST00000558072 TMEM63AO94886 807 aa12.49□□□□□ -0.41
TPM1-209ENST00000558072 PAPSS2O95340 614 aaPredicted RBP12.49□□□□□ -0.41
TPM1-209ENST00000558072 POLBP06746 335 aa12.49□□□□□ -0.41
TPM1-209ENST00000558072 HLA-EP13747 358 aa12.49□□□□□ -0.41
TPM1-209ENST00000558072 HOXB2P14652 356 aa12.49□□□□□ -0.41
TPM1-209ENST00000558072 ITGB7P26010 798 aa12.49□□□□□ -0.41
TPM1-209ENST00000558072 MAGEA3P43357 314 aa12.49□□□□□ -0.41
TPM1-209ENST00000558072 MAGEA4P43358 317 aa12.49□□□□□ -0.41
TPM1-209ENST00000558072 RGRP47804 291 aa12.49□□□□□ -0.41
TPM1-209ENST00000558072 DHX9Q08211 1270 aaKnown RBP12.49□□□□□ -0.41
TPM1-209ENST00000558072 ELP6Q0PNE2 266 aa12.49□□□□□ -0.41
TPM1-209ENST00000558072 UBXN2BQ14CS0 331 aa12.49□□□□□ -0.41
TPM1-209ENST00000558072 BBS9Q3SYG4 887 aa12.49□□□□□ -0.41
TPM1-209ENST00000558072 ANKRD22Q5VYY1 191 aa12.49□□□□□ -0.41
TPM1-209ENST00000558072 ZNF776Q68DI1 518 aaPredicted RBP12.49□□□□□ -0.41
TPM1-209ENST00000558072 ERAP2Q6P179 960 aa12.49□□□□□ -0.41
TPM1-209ENST00000558072 CASC4Q6P4E1 433 aa12.49□□□□□ -0.41
TPM1-209ENST00000558072 ZNF449Q6P9G9 518 aa12.49□□□□□ -0.41
TPM1-209ENST00000558072 CROCCP2Q86T23 111 aa12.49□□□□□ -0.41
TPM1-209ENST00000558072 MREGQ8N565 214 aa12.49□□□□□ -0.41
TPM1-209ENST00000558072 OR52K1Q8NGK4 314 aa12.49□□□□□ -0.41
TPM1-209ENST00000558072 BRSK1Q8TDC3 778 aa12.49□□□□□ -0.41
TPM1-209ENST00000558072 AENQ8WTP8 325 aaKnown RBP12.49□□□□□ -0.41
Retrieved 100 of 20,778 RNA–protein pairs in 67 ms