RNA–Protein interactions for RNA: ENST00000558059.5

SNRPA1-206, Transcript of small nuclear ribonucleoprotein polypeptide A', humanhuman

TSL 2

Gene SNRPA1, Length 678 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNRPA1-206ENST00000558059 TRIM14Q14142 442 aa8.88□□□□□ -0.99
SNRPA1-206ENST00000558059 SLC18A3Q16572 532 aa8.88□□□□□ -0.99
SNRPA1-206ENST00000558059 LRRC73Q5JTD7 316 aa8.88□□□□□ -0.99
SNRPA1-206ENST00000558059 Q6ZSR6 202 aa8.88□□□□□ -0.99
SNRPA1-206ENST00000558059 SRLQ86TD4 932 aa8.88□□□□□ -0.99
SNRPA1-206ENST00000558059 TTC7BQ86TV6 843 aa8.88□□□□□ -0.99
SNRPA1-206ENST00000558059 ZSCAN30Q86W11 494 aa8.88□□□□□ -0.99
SNRPA1-206ENST00000558059 SLC22A18ASQ8N1D0 253 aa8.88□□□□□ -0.99
SNRPA1-206ENST00000558059 TSEN2Q8NCE0 465 aaKnown RBP8.88□□□□□ -0.99
SNRPA1-206ENST00000558059 ZNF564Q8TBZ8 553 aaPredicted RBP8.88□□□□□ -0.99
SNRPA1-206ENST00000558059 FAM71BQ8TC56 605 aa8.88□□□□□ -0.99
SNRPA1-206ENST00000558059 HCAR2Q8TDS4 363 aa8.88□□□□□ -0.99
SNRPA1-206ENST00000558059 ASB12Q8WXK4 309 aa8.88□□□□□ -0.99
SNRPA1-206ENST00000558059 NSMCE3Q96MG7 304 aa8.88□□□□□ -0.99
SNRPA1-206ENST00000558059 LENG8Q96PV6 779 aaPredicted RBP8.88□□□□□ -0.99
SNRPA1-206ENST00000558059 CSPG4P5Q96PW8 444 aa8.88□□□□□ -0.99
SNRPA1-206ENST00000558059 CHP1Q99653 195 aa8.88□□□□□ -0.99
SNRPA1-206ENST00000558059 PACSIN1Q9BY11 444 aa8.88□□□□□ -0.99
SNRPA1-206ENST00000558059 SUV39H2Q9H5I1 410 aa8.88□□□□□ -0.99
SNRPA1-206ENST00000558059 PCDH18Q9HCL0 1135 aa8.88□□□□□ -0.99
SNRPA1-206ENST00000558059 GPR27Q9NS67 375 aa8.88□□□□□ -0.99
SNRPA1-206ENST00000558059 KLHL11Q9NVR0 708 aa8.88□□□□□ -0.99
SNRPA1-206ENST00000558059 IPO11Q9UI26 975 aaKnown RBP8.88□□□□□ -0.99
SNRPA1-206ENST00000558059 MSRB2Q9Y3D2 182 aa8.88□□□□□ -0.99
SNRPA1-206ENST00000558059 URB1O60287 2271 aaKnown RBP8.88□□□□□ -0.99
SNRPA1-206ENST00000558059 CHD6Q8TD26 2715 aa8.88□□□□□ -0.99
SNRPA1-206ENST00000558059 NEMP1O14524 444 aa8.87□□□□□ -0.99
SNRPA1-206ENST00000558059 PEX11BO96011 259 aa8.87□□□□□ -0.99
SNRPA1-206ENST00000558059 PROS1P07225 676 aa8.87□□□□□ -0.99
SNRPA1-206ENST00000558059 CD48P09326 243 aa8.87□□□□□ -0.99
SNRPA1-206ENST00000558059 H2AFZP0C0S5 128 aa8.87□□□□□ -0.99
SNRPA1-206ENST00000558059 ARL4AP40617 200 aa8.87□□□□□ -0.99
SNRPA1-206ENST00000558059 ADKP55263 362 aaKnown RBP8.87□□□□□ -0.99
SNRPA1-206ENST00000558059 NSUN2Q08J23 767 aaKnown RBP eCLIP8.87□□□□□ -0.99
SNRPA1-206ENST00000558059 SLC10A7Q0GE19 358 aa8.87□□□□□ -0.99
SNRPA1-206ENST00000558059 TBX2Q13207 712 aaPredicted RBP8.87□□□□□ -0.99
SNRPA1-206ENST00000558059 SGCGQ13326 291 aa8.87□□□□□ -0.99
SNRPA1-206ENST00000558059 RFTN1Q14699 578 aaPredicted RBP8.87□□□□□ -0.99
SNRPA1-206ENST00000558059 GRM3Q14832 879 aa8.87□□□□□ -0.99
SNRPA1-206ENST00000558059 INAVAQ3KP66 663 aa8.87□□□□□ -0.99
SNRPA1-206ENST00000558059 TMEM52BQ4KMG9 183 aa8.87□□□□□ -0.99
SNRPA1-206ENST00000558059 ATP13A4Q4VNC1 1196 aa8.87□□□□□ -0.99
SNRPA1-206ENST00000558059 TPRG1LQ5T0D9 272 aa8.87□□□□□ -0.99
SNRPA1-206ENST00000558059 UNQ6494/PRO21346Q6UXR6 183 aa8.87□□□□□ -0.99
SNRPA1-206ENST00000558059 KYAT3Q6YP21 454 aaKnown RBP8.87□□□□□ -0.99
SNRPA1-206ENST00000558059 H2AFVQ71UI9 128 aa8.87□□□□□ -0.99
SNRPA1-206ENST00000558059 LAPTM4BQ86VI4 370 aa8.87□□□□□ -0.99
SNRPA1-206ENST00000558059 ZSWIM9Q86XI8 627 aa8.87□□□□□ -0.99
SNRPA1-206ENST00000558059 DCP2Q8IU60 420 aaKnown RBP8.87□□□□□ -0.99
SNRPA1-206ENST00000558059 CAMK1DQ8IU85 385 aa8.87□□□□□ -0.99
SNRPA1-206ENST00000558059 SLC25A45Q8N413 288 aa8.87□□□□□ -0.99
SNRPA1-206ENST00000558059 EID2Q8N6I1 236 aa8.87□□□□□ -0.99
SNRPA1-206ENST00000558059 FAM174AQ8TBP5 190 aa8.87□□□□□ -0.99
SNRPA1-206ENST00000558059 CENPTQ96BT3 561 aa8.87□□□□□ -0.99
SNRPA1-206ENST00000558059 ZNF641Q96N77 438 aaPredicted RBP8.87□□□□□ -0.99
SNRPA1-206ENST00000558059 SP110Q9HB58 689 aa8.87□□□□□ -0.99
SNRPA1-206ENST00000558059 ABHD10Q9NUJ1 306 aa8.87□□□□□ -0.99
SNRPA1-206ENST00000558059 CTTNBP2NLQ9P2B4 639 aa8.87□□□□□ -0.99
SNRPA1-206ENST00000558059 UVRAGQ9P2Y5 699 aa8.87□□□□□ -0.99
SNRPA1-206ENST00000558059 FTSJ1Q9UET6 329 aa8.87□□□□□ -0.99
SNRPA1-206ENST00000558059 ARHGEF17Q96PE2 2063 aaPredicted RBP8.87□□□□□ -0.99
SNRPA1-206ENST00000558059 LAMA5O15230 3695 aa8.86□□□□□ -0.99
SNRPA1-206ENST00000558059 PKD1L2Q7Z442 2459 aa8.86□□□□□ -0.99
SNRPA1-206ENST00000558059 A6NNZ2 444 aa8.86□□□□□ -0.99
SNRPA1-206ENST00000558059 TRIM38O00635 465 aa8.86□□□□□ -0.99
SNRPA1-206ENST00000558059 ENC1O14682 589 aa8.86□□□□□ -0.99
SNRPA1-206ENST00000558059 AKR1B10O60218 316 aa8.86□□□□□ -0.99
SNRPA1-206ENST00000558059 MAFKO60675 156 aa8.86□□□□□ -0.99
SNRPA1-206ENST00000558059 MMP20O60882 483 aa8.86□□□□□ -0.99
SNRPA1-206ENST00000558059 SDC3O75056 442 aa8.86□□□□□ -0.99
SNRPA1-206ENST00000558059 MFAP3LO75121 409 aa8.86□□□□□ -0.99
SNRPA1-206ENST00000558059 PROSCO94903 275 aa8.86□□□□□ -0.99
SNRPA1-206ENST00000558059 LDOC1O95751 146 aaPredicted RBP8.86□□□□□ -0.99
SNRPA1-206ENST00000558059 CAPNS1P04632 268 aa8.86□□□□□ -0.99
SNRPA1-206ENST00000558059 TMEM253P0C7T8 217 aa8.86□□□□□ -0.99
SNRPA1-206ENST00000558059 GIMD1P0DJR0 217 aa8.86□□□□□ -0.99
SNRPA1-206ENST00000558059 DGKAP23743 735 aa8.86□□□□□ -0.99
SNRPA1-206ENST00000558059 RABIFP47224 123 aa8.86□□□□□ -0.99
SNRPA1-206ENST00000558059 SUOXP51687 545 aa8.86□□□□□ -0.99
SNRPA1-206ENST00000558059 CDH6P55285 790 aa8.86□□□□□ -0.99
SNRPA1-206ENST00000558059 TAS2R40P59535 323 aa8.86□□□□□ -0.99
SNRPA1-206ENST00000558059 PFN3P60673 137 aa8.86□□□□□ -0.99
SNRPA1-206ENST00000558059 DNAJC3Q13217 504 aa8.86□□□□□ -0.99
SNRPA1-206ENST00000558059 FZD2Q14332 565 aa8.86□□□□□ -0.99
SNRPA1-206ENST00000558059 ST3GAL2Q16842 350 aa8.86□□□□□ -0.99
SNRPA1-206ENST00000558059 UGP2Q16851 508 aa8.86□□□□□ -0.99
SNRPA1-206ENST00000558059 TMCO4Q5TGY1 634 aa8.86□□□□□ -0.99
SNRPA1-206ENST00000558059 BRAT1Q6PJG6 821 aa8.86□□□□□ -0.99
SNRPA1-206ENST00000558059 TMCO3Q6UWJ1 677 aa8.86□□□□□ -0.99
SNRPA1-206ENST00000558059 CCNI2Q6ZMN8 369 aaPredicted RBP8.86□□□□□ -0.99
SNRPA1-206ENST00000558059 KDM7AQ6ZMT4 941 aa8.86□□□□□ -0.99
SNRPA1-206ENST00000558059 TMPRSS7Q7RTY8 843 aa8.86□□□□□ -0.99
SNRPA1-206ENST00000558059 PTAR1Q7Z6K3 402 aaPredicted RBP8.86□□□□□ -0.99
SNRPA1-206ENST00000558059 KDF1Q8NAX2 398 aaPredicted RBP8.86□□□□□ -0.99
SNRPA1-206ENST00000558059 DENND6BQ8NEG7 585 aa8.86□□□□□ -0.99
SNRPA1-206ENST00000558059 CTNNBL1Q8WYA6 563 aaPredicted RBP8.86□□□□□ -0.99
SNRPA1-206ENST00000558059 ECHDC3Q96DC8 303 aa8.86□□□□□ -0.99
SNRPA1-206ENST00000558059 IFT43Q96FT9 208 aa8.86□□□□□ -0.99
SNRPA1-206ENST00000558059 CNDP2Q96KP4 475 aaKnown RBP8.86□□□□□ -0.99
SNRPA1-206ENST00000558059 ZNF599Q96NL3 588 aa8.86□□□□□ -0.99
Retrieved 100 of 20,778 RNA–protein pairs in 22.6 ms