RNA–Protein interactions for RNA: ENST00000557916.5

SMAD6-202, Transcript of SMAD family member 6, humanhuman

TSL 1 (best)

Gene SMAD6, Length 1,401 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMAD6-202ENST00000557916 RGL4Q8IZJ4 473 aa25.76■■□□□ 1.71
SMAD6-202ENST00000557916 SNX19Q92543 992 aa25.76■■□□□ 1.71
SMAD6-202ENST00000557916 BIRC7Q96CA5 298 aa25.76■■□□□ 1.71
SMAD6-202ENST00000557916 OSBPL9Q96SU4 736 aa25.76■■□□□ 1.71
SMAD6-202ENST00000557916 TRHDEQ9UKU6 1024 aa25.76■■□□□ 1.71
SMAD6-202ENST00000557916 SNX12Q9UMY4 172 aa25.76■■□□□ 1.71
SMAD6-202ENST00000557916 PCDHB9Q9Y5E1 797 aa25.76■■□□□ 1.71
SMAD6-202ENST00000557916 A0A1W2PQ67 120 aa25.75■■□□□ 1.71
SMAD6-202ENST00000557916 UPK3BL1B0FP48 263 aa25.75■■□□□ 1.71
SMAD6-202ENST00000557916 UPK3BL2E5RIL1 263 aa25.75■■□□□ 1.71
SMAD6-202ENST00000557916 NEMP1O14524 444 aa25.75■■□□□ 1.71
SMAD6-202ENST00000557916 STK10O94804 968 aaKnown RBP25.75■■□□□ 1.71
SMAD6-202ENST00000557916 IGHV4-34P06331 123 aa25.75■■□□□ 1.71
SMAD6-202ENST00000557916 MMP2P08253 660 aa25.75■■□□□ 1.71
SMAD6-202ENST00000557916 CCR5P51681 352 aa25.75■■□□□ 1.71
SMAD6-202ENST00000557916 PPP2CBP62714 309 aa25.75■■□□□ 1.71
SMAD6-202ENST00000557916 PPP2CAP67775 309 aa25.75■■□□□ 1.71
SMAD6-202ENST00000557916 ASCL5Q7RTU5 278 aa25.75■■□□□ 1.71
SMAD6-202ENST00000557916 RASGEF1CQ8N431 466 aa25.75■■□□□ 1.71
SMAD6-202ENST00000557916 C1orf54Q8WWF1 131 aa25.75■■□□□ 1.71
SMAD6-202ENST00000557916 IMP4Q96G21 291 aaKnown RBP25.75■■□□□ 1.71
SMAD6-202ENST00000557916 ARRDC1-AS1Q9H2J1 176 aa25.75■■□□□ 1.71
SMAD6-202ENST00000557916 USP29Q9HBJ7 922 aa25.75■■□□□ 1.71
SMAD6-202ENST00000557916 NCDNQ9UBB6 729 aa25.75■■□□□ 1.71
SMAD6-202ENST00000557916 PCDHGA5Q9Y5G8 931 aa25.75■■□□□ 1.71
SMAD6-202ENST00000557916 ZFHX2Q9C0A1 2572 aaPredicted RBP25.74■■□□□ 1.71
SMAD6-202ENST00000557916 C10orf142B7Z368 130 aa25.74■■□□□ 1.71
SMAD6-202ENST00000557916 AREL1O15033 823 aa25.74■■□□□ 1.71
SMAD6-202ENST00000557916 TSPAN6O43657 245 aa25.74■■□□□ 1.71
SMAD6-202ENST00000557916 LIASO43766 372 aa25.74■■□□□ 1.71
SMAD6-202ENST00000557916 RNGTTO60942 597 aaKnown RBP25.74■■□□□ 1.71
SMAD6-202ENST00000557916 ITIH2P19823 946 aa25.74■■□□□ 1.71
SMAD6-202ENST00000557916 MAOBP27338 520 aa25.74■■□□□ 1.71
SMAD6-202ENST00000557916 CD68P34810 354 aaPredicted RBP25.74■■□□□ 1.71
SMAD6-202ENST00000557916 SKOR1P84550 965 aa25.74■■□□□ 1.71
SMAD6-202ENST00000557916 SIX1Q15475 284 aaPredicted RBP25.74■■□□□ 1.71
SMAD6-202ENST00000557916 HS1BP3Q53T59 392 aa25.74■■□□□ 1.71
SMAD6-202ENST00000557916 ARMC12Q5T9G4 340 aa25.74■■□□□ 1.71
SMAD6-202ENST00000557916 SPOCK2Q92563 424 aa25.74■■□□□ 1.71
SMAD6-202ENST00000557916 PIGKQ92643 395 aa25.74■■□□□ 1.71
SMAD6-202ENST00000557916 TRIM44Q96DX7 344 aaPredicted RBP25.74■■□□□ 1.71
SMAD6-202ENST00000557916 RBM15Q96T37 977 aaKnown RBP eCLIP25.74■■□□□ 1.71
SMAD6-202ENST00000557916 PCDH12Q9NPG4 1184 aa25.74■■□□□ 1.71
SMAD6-202ENST00000557916 GGT7Q9UJ14 662 aa25.74■■□□□ 1.71
SMAD6-202ENST00000557916 ITM2BQ9Y287 266 aa25.74■■□□□ 1.71
SMAD6-202ENST00000557916 CEP192Q8TEP8 1941 aa25.74■■□□□ 1.71
SMAD6-202ENST00000557916 USP34Q70CQ2 3546 aa25.73■■□□□ 1.71
SMAD6-202ENST00000557916 A0A1W2PQU0 124 aa25.73■■□□□ 1.71
SMAD6-202ENST00000557916 SPINT1O43278 529 aa25.73■■□□□ 1.71
SMAD6-202ENST00000557916 PGLSO95336 258 aa25.73■■□□□ 1.71
SMAD6-202ENST00000557916 CPP00450 1065 aa25.73■■□□□ 1.71
SMAD6-202ENST00000557916 NFKB1P19838 968 aa25.73■■□□□ 1.71
SMAD6-202ENST00000557916 CA4P22748 312 aa25.73■■□□□ 1.71
SMAD6-202ENST00000557916 ELP6Q0PNE2 266 aa25.73■■□□□ 1.71
SMAD6-202ENST00000557916 ERAP2Q6P179 960 aa25.73■■□□□ 1.71
SMAD6-202ENST00000557916 PRPF39Q86UA1 669 aaKnown RBP25.73■■□□□ 1.71
SMAD6-202ENST00000557916 TRIM69Q86WT6 500 aa25.73■■□□□ 1.71
SMAD6-202ENST00000557916 SYT12Q8IV01 421 aa25.73■■□□□ 1.71
SMAD6-202ENST00000557916 COG1Q8WTW3 980 aa25.73■■□□□ 1.71
SMAD6-202ENST00000557916 DNASE2BQ8WZ79 361 aa25.73■■□□□ 1.71
SMAD6-202ENST00000557916 MS4A14Q96JA4 679 aa25.73■■□□□ 1.71
SMAD6-202ENST00000557916 FEM1CQ96JP0 617 aa25.73■■□□□ 1.71
SMAD6-202ENST00000557916 NAPGQ99747 312 aaPredicted RBP25.73■■□□□ 1.71
SMAD6-202ENST00000557916 TDRD1Q9BXT4 1180 aaKnown RBP25.73■■□□□ 1.71
SMAD6-202ENST00000557916 EIF2B4Q9UI10 523 aaKnown RBP25.73■■□□□ 1.71
SMAD6-202ENST00000557916 TPX2Q9ULW0 747 aaKnown RBP25.73■■□□□ 1.71
SMAD6-202ENST00000557916 ATXN2Q99700 1313 aaKnown RBP25.73■■□□□ 1.71
SMAD6-202ENST00000557916 ANKRD36A6QL64 1941 aa25.73■■□□□ 1.71
SMAD6-202ENST00000557916 PRKCGP05129 697 aa25.72■■□□□ 1.71
SMAD6-202ENST00000557916 MAT2AP31153 395 aaKnown RBP25.72■■□□□ 1.71
SMAD6-202ENST00000557916 ANKRD20A2Q5SQ80 823 aa25.72■■□□□ 1.71
SMAD6-202ENST00000557916 ANKRD20A1Q5TYW2 823 aa25.72■■□□□ 1.71
SMAD6-202ENST00000557916 ANKRD20A3Q5VUR7 823 aa25.72■■□□□ 1.71
SMAD6-202ENST00000557916 HORMAD1Q86X24 394 aa25.72■■□□□ 1.71
SMAD6-202ENST00000557916 FAM71DQ8N9W8 422 aa25.72■■□□□ 1.71
SMAD6-202ENST00000557916 SPATA22Q8NHS9 363 aa25.72■■□□□ 1.71
SMAD6-202ENST00000557916 RUBCNQ92622 972 aa25.72■■□□□ 1.71
SMAD6-202ENST00000557916 TMEM121Q9BTD3 319 aa25.72■■□□□ 1.71
SMAD6-202ENST00000557916 MIR1-1HGQ9H1L0 117 aa25.72■■□□□ 1.71
SMAD6-202ENST00000557916 TMEM74BQ9NUR3 256 aa25.72■■□□□ 1.71
SMAD6-202ENST00000557916 RSPH14Q9UHP6 348 aa25.72■■□□□ 1.71
SMAD6-202ENST00000557916 PILRBQ9UKJ0 227 aa25.72■■□□□ 1.71
SMAD6-202ENST00000557916 TTC7AQ9ULT0 858 aaPredicted RBP25.72■■□□□ 1.71
SMAD6-202ENST00000557916 PHTF1Q9UMS5 762 aa25.72■■□□□ 1.71
SMAD6-202ENST00000557916 CHKBQ9Y259 395 aa25.72■■□□□ 1.71
SMAD6-202ENST00000557916 ZKSCAN5Q9Y2L8 839 aa25.72■■□□□ 1.71
SMAD6-202ENST00000557916 WDR87Q6ZQQ6 2873 aa25.72■■□□□ 1.71
SMAD6-202ENST00000557916 CTAGE9A4FU28 777 aa25.71■■□□□ 1.71
SMAD6-202ENST00000557916 CFAP69A5D8W1 941 aa25.71■■□□□ 1.71
SMAD6-202ENST00000557916 RIOK3O14730 519 aaKnown RBP25.71■■□□□ 1.71
SMAD6-202ENST00000557916 FZD6O60353 706 aa25.71■■□□□ 1.71
SMAD6-202ENST00000557916 PDHA1P08559 390 aa25.71■■□□□ 1.71
SMAD6-202ENST00000557916 CD27P26842 260 aa25.71■■□□□ 1.71
SMAD6-202ENST00000557916 MPLP40238 635 aa25.71■■□□□ 1.71
SMAD6-202ENST00000557916 DPP6P42658 865 aa25.71■■□□□ 1.71
SMAD6-202ENST00000557916 FAM193AP78312 1265 aa25.71■■□□□ 1.71
SMAD6-202ENST00000557916 SNX1Q13596 522 aa25.71■■□□□ 1.71
SMAD6-202ENST00000557916 CCNG2Q16589 344 aa25.71■■□□□ 1.71
SMAD6-202ENST00000557916 ITPRIPL1Q6GPH6 555 aa25.71■■□□□ 1.71
SMAD6-202ENST00000557916 KIAA1161Q6NSJ0 714 aa25.71■■□□□ 1.71
Retrieved 100 of 20,778 RNA–protein pairs in 30.4 ms