RNA–Protein interactions for RNA: ENST00000557673.5

NEK9-211, Transcript of NIMA related kinase 9, humanhuman

TSL 3

Gene NEK9, Length 657 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NEK9-211ENST00000557673 RARAP10276 462 aa16.87■□□□□ 0.29
NEK9-211ENST00000557673 CHRNA3P32297 505 aa16.87■□□□□ 0.29
NEK9-211ENST00000557673 HTR7P34969 479 aa16.87■□□□□ 0.29
NEK9-211ENST00000557673 NOP2P46087 812 aaKnown RBP16.87■□□□□ 0.29
NEK9-211ENST00000557673 TMPRSS3P57727 454 aa16.87■□□□□ 0.29
NEK9-211ENST00000557673 TAS2R38P59533 333 aa16.87■□□□□ 0.29
NEK9-211ENST00000557673 TAS2R40P59535 323 aa16.87■□□□□ 0.29
NEK9-211ENST00000557673 ERVPABLB-1P60509 514 aa16.87■□□□□ 0.29
NEK9-211ENST00000557673 RHDQ02161 417 aa16.87■□□□□ 0.29
NEK9-211ENST00000557673 GNA12Q03113 381 aa16.87■□□□□ 0.29
NEK9-211ENST00000557673 PIP5KL1Q5T9C9 394 aa16.87■□□□□ 0.29
NEK9-211ENST00000557673 ZNF783Q6ZMS7 281 aa16.87■□□□□ 0.29
NEK9-211ENST00000557673 NLRP14Q86W24 1093 aa16.87■□□□□ 0.29
NEK9-211ENST00000557673 ZNF843Q8N446 348 aa16.87■□□□□ 0.29
NEK9-211ENST00000557673 WBP1Q96G27 269 aa16.87■□□□□ 0.29
NEK9-211ENST00000557673 PPP1R16AQ96I34 528 aa16.87■□□□□ 0.29
NEK9-211ENST00000557673 CALN1Q9BXU9 219 aa16.87■□□□□ 0.29
NEK9-211ENST00000557673 KCNF1Q9H3M0 494 aa16.87■□□□□ 0.29
NEK9-211ENST00000557673 NDFIP2Q9NV92 336 aa16.87■□□□□ 0.29
NEK9-211ENST00000557673 NCKIPSDQ9NZQ3 722 aa16.87■□□□□ 0.29
NEK9-211ENST00000557673 TRIM10Q9UDY6 481 aa16.87■□□□□ 0.29
NEK9-211ENST00000557673 CA5BQ9Y2D0 317 aa16.87■□□□□ 0.29
NEK9-211ENST00000557673 DUSP10Q9Y6W6 482 aa16.87■□□□□ 0.29
NEK9-211ENST00000557673 ASH1LQ9NR48 2969 aaKnown RBP16.87■□□□□ 0.29
NEK9-211ENST00000557673 CREB3O43889 395 aa16.86■□□□□ 0.29
NEK9-211ENST00000557673 ZMPSTE24O75844 475 aa16.86■□□□□ 0.29
NEK9-211ENST00000557673 DXOO77932 396 aaKnown RBP16.86■□□□□ 0.29
NEK9-211ENST00000557673 PCDH8O95206 1070 aa16.86■□□□□ 0.29
NEK9-211ENST00000557673 CTSLP07711 333 aa16.86■□□□□ 0.29
NEK9-211ENST00000557673 PLA2G2AP14555 144 aa16.86■□□□□ 0.29
NEK9-211ENST00000557673 PRLRP16471 622 aa16.86■□□□□ 0.29
NEK9-211ENST00000557673 RHOQP17081 205 aa16.86■□□□□ 0.29
NEK9-211ENST00000557673 GJC1P36383 396 aa16.86■□□□□ 0.29
NEK9-211ENST00000557673 ACVRL1P37023 503 aa16.86■□□□□ 0.29
NEK9-211ENST00000557673 SSR1P43307 286 aaKnown RBP16.86■□□□□ 0.29
NEK9-211ENST00000557673 RECQLP46063 649 aaPredicted RBP16.86■□□□□ 0.29
NEK9-211ENST00000557673 LSSP48449 732 aa16.86■□□□□ 0.29
NEK9-211ENST00000557673 CLCN6P51797 869 aa16.86■□□□□ 0.29
NEK9-211ENST00000557673 TPI1P60174 286 aa16.86■□□□□ 0.29
NEK9-211ENST00000557673 HNRNPKP61978 463 aaKnown RBP eCLIP16.86■□□□□ 0.29
NEK9-211ENST00000557673 ARF5P84085 180 aa16.86■□□□□ 0.29
NEK9-211ENST00000557673 CFHR1Q03591 330 aa16.86■□□□□ 0.29
NEK9-211ENST00000557673 HADHQ16836 314 aaKnown RBP16.86■□□□□ 0.29
NEK9-211ENST00000557673 ZNF284Q2VY69 593 aa16.86■□□□□ 0.29
NEK9-211ENST00000557673 BOLA3Q53S33 107 aa16.86■□□□□ 0.29
NEK9-211ENST00000557673 TAF1BQ53T94 588 aaPredicted RBP16.86■□□□□ 0.29
NEK9-211ENST00000557673 CDCP2Q5VXM1 449 aa16.86■□□□□ 0.29
NEK9-211ENST00000557673 C22orf39Q6P5X5 142 aa16.86■□□□□ 0.29
NEK9-211ENST00000557673 POLNQ7Z5Q5 900 aa16.86■□□□□ 0.29
NEK9-211ENST00000557673 FAM181AQ8N9Y4 354 aa16.86■□□□□ 0.29
NEK9-211ENST00000557673 OR2A12Q8NGT7 310 aa16.86■□□□□ 0.29
NEK9-211ENST00000557673 TPCN2Q8NHX9 752 aa16.86■□□□□ 0.29
NEK9-211ENST00000557673 HSPH1Q92598 858 aa16.86■□□□□ 0.29
NEK9-211ENST00000557673 CALR3Q96L12 384 aaKnown RBP16.86■□□□□ 0.29
NEK9-211ENST00000557673 MYOCQ99972 504 aa16.86■□□□□ 0.29
NEK9-211ENST00000557673 TNKS2Q9H2K2 1166 aa16.86■□□□□ 0.29
NEK9-211ENST00000557673 GOLPH3Q9H4A6 298 aa16.86■□□□□ 0.29
NEK9-211ENST00000557673 POLR1BQ9H9Y6 1135 aa16.86■□□□□ 0.29
NEK9-211ENST00000557673 TMEM248Q9NWD8 314 aa16.86■□□□□ 0.29
NEK9-211ENST00000557673 UCKL1Q9NWZ5 548 aa16.86■□□□□ 0.29
NEK9-211ENST00000557673 DNAI1Q9UI46 699 aa16.86■□□□□ 0.29
NEK9-211ENST00000557673 SCAMP1O15126 338 aa16.85■□□□□ 0.29
NEK9-211ENST00000557673 FGF10O15520 208 aaPredicted RBP16.85■□□□□ 0.29
NEK9-211ENST00000557673 BUB1O43683 1085 aa16.85■□□□□ 0.29
NEK9-211ENST00000557673 USP12O75317 370 aa16.85■□□□□ 0.29
NEK9-211ENST00000557673 MPOP05164 745 aa16.85■□□□□ 0.29
NEK9-211ENST00000557673 CCDC175P0C221 793 aa16.85■□□□□ 0.29
NEK9-211ENST00000557673 EPHB2P29323 1055 aa16.85■□□□□ 0.29
NEK9-211ENST00000557673 SLC1A1P43005 524 aa16.85■□□□□ 0.29
NEK9-211ENST00000557673 MAPKAPK2P49137 400 aa16.85■□□□□ 0.29
NEK9-211ENST00000557673 SERPINH1P50454 418 aaKnown RBP16.85■□□□□ 0.29
NEK9-211ENST00000557673 ZNF135P52742 658 aaPredicted RBP16.85■□□□□ 0.29
NEK9-211ENST00000557673 GABREP78334 506 aa16.85■□□□□ 0.29
NEK9-211ENST00000557673 KIF5AQ12840 1032 aa16.85■□□□□ 0.29
NEK9-211ENST00000557673 PPP6R3Q5H9R7 873 aaPredicted RBP16.85■□□□□ 0.29
NEK9-211ENST00000557673 RETSATQ6NUM9 610 aa16.85■□□□□ 0.29
NEK9-211ENST00000557673 ERN2Q76MJ5 926 aaKnown RBP16.85■□□□□ 0.29
NEK9-211ENST00000557673 ABI3BPQ7Z7G0 1075 aa16.85■□□□□ 0.29
NEK9-211ENST00000557673 RTL3Q8N8U3 475 aaKnown RBP16.85■□□□□ 0.29
NEK9-211ENST00000557673 CHST14Q8NCH0 376 aa16.85■□□□□ 0.29
NEK9-211ENST00000557673 OR13H1Q8NG92 308 aa16.85■□□□□ 0.29
NEK9-211ENST00000557673 KLK6Q92876 244 aa16.85■□□□□ 0.29
NEK9-211ENST00000557673 GRAMD1AQ96CP6 724 aa16.85■□□□□ 0.29
NEK9-211ENST00000557673 HIC2Q96JB3 615 aa16.85■□□□□ 0.29
NEK9-211ENST00000557673 HDAC8Q9BY41 377 aa16.85■□□□□ 0.29
NEK9-211ENST00000557673 DPH1Q9BZG8 443 aa16.85■□□□□ 0.29
NEK9-211ENST00000557673 RETREG1Q9H6L5 497 aa16.85■□□□□ 0.29
NEK9-211ENST00000557673 PCDH18Q9HCL0 1135 aa16.85■□□□□ 0.29
NEK9-211ENST00000557673 THSD1Q9NS62 852 aa16.85■□□□□ 0.29
NEK9-211ENST00000557673 HYOU1Q9Y4L1 999 aa16.85■□□□□ 0.29
NEK9-211ENST00000557673 PCDHB1Q9Y5F3 818 aa16.85■□□□□ 0.29
NEK9-211ENST00000557673 ACTL7AQ9Y615 435 aa16.85■□□□□ 0.29
NEK9-211ENST00000557673 HS3ST3A1Q9Y663 406 aa16.85■□□□□ 0.29
NEK9-211ENST00000557673 ZNF462Q96JM2 2506 aa16.85■□□□□ 0.29
NEK9-211ENST00000557673 A6NNZ2 444 aa16.84■□□□□ 0.29
NEK9-211ENST00000557673 RNF103O00237 685 aa16.84■□□□□ 0.29
NEK9-211ENST00000557673 EEF2KO00418 725 aaKnown RBP16.84■□□□□ 0.29
NEK9-211ENST00000557673 SPOPO43791 374 aa16.84■□□□□ 0.29
NEK9-211ENST00000557673 ZNF821O75541 412 aaPredicted RBP16.84■□□□□ 0.29
NEK9-211ENST00000557673 KRT7P08729 469 aa16.84■□□□□ 0.29
Retrieved 100 of 20,778 RNA–protein pairs in 24.4 ms