RNA–Protein interactions for RNA: ENST00000557658.5

VIPAS39-211, Transcript of VPS33B interacting protein, apical-basolateral polarity regulator, spe-39 homolog, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene VIPAS39, Length 2,562 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VIPAS39-211ENST00000557658 ZNF135P52742 658 aaPredicted RBP11.91□□□□□ -0.5
VIPAS39-211ENST00000557658 CCNA1P78396 465 aa11.91□□□□□ -0.5
VIPAS39-211ENST00000557658 PLOD1Q02809 727 aaPredicted RBP11.91□□□□□ -0.5
VIPAS39-211ENST00000557658 ESRP1Q6NXG1 681 aaKnown RBP11.91□□□□□ -0.5
VIPAS39-211ENST00000557658 C8orf82Q6P1X6 216 aaPredicted RBP11.91□□□□□ -0.5
VIPAS39-211ENST00000557658 TTC33Q6PID6 262 aaPredicted RBP11.91□□□□□ -0.5
VIPAS39-211ENST00000557658 CAMK1DQ8IU85 385 aa11.91□□□□□ -0.5
VIPAS39-211ENST00000557658 MFSD2AQ8NA29 543 aa11.91□□□□□ -0.5
VIPAS39-211ENST00000557658 USP33Q8TEY7 942 aa11.91□□□□□ -0.5
VIPAS39-211ENST00000557658 SNRNP27Q8WVK2 155 aaKnown RBP11.91□□□□□ -0.5
VIPAS39-211ENST00000557658 ISOC1Q96CN7 298 aa11.91□□□□□ -0.5
VIPAS39-211ENST00000557658 MED10Q9BTT4 135 aa11.91□□□□□ -0.5
VIPAS39-211ENST00000557658 RHOBTB2Q9BYZ6 727 aa11.91□□□□□ -0.5
VIPAS39-211ENST00000557658 CYP4F12Q9HCS2 524 aa11.91□□□□□ -0.5
VIPAS39-211ENST00000557658 FAIMQ9NVQ4 179 aa11.91□□□□□ -0.5
VIPAS39-211ENST00000557658 ASB14A6NK59 587 aa11.9□□□□□ -0.5
VIPAS39-211ENST00000557658 SAC3D1A6NKF1 404 aa11.9□□□□□ -0.5
VIPAS39-211ENST00000557658 NRP1O14786 923 aa11.9□□□□□ -0.5
VIPAS39-211ENST00000557658 IPO13O94829 963 aaKnown RBP11.9□□□□□ -0.5
VIPAS39-211ENST00000557658 FYNP06241 537 aa11.9□□□□□ -0.5
VIPAS39-211ENST00000557658 PAMP19021 973 aa11.9□□□□□ -0.5
VIPAS39-211ENST00000557658 GRIA3P42263 894 aa11.9□□□□□ -0.5
VIPAS39-211ENST00000557658 STT3AP46977 705 aa11.9□□□□□ -0.5
VIPAS39-211ENST00000557658 NME5P56597 212 aa11.9□□□□□ -0.5
VIPAS39-211ENST00000557658 STX1BP61266 288 aa11.9□□□□□ -0.5
VIPAS39-211ENST00000557658 PFKPQ01813 784 aa11.9□□□□□ -0.5
VIPAS39-211ENST00000557658 CSHL1Q14406 222 aa11.9□□□□□ -0.5
VIPAS39-211ENST00000557658 PPP1R3AQ16821 1122 aa11.9□□□□□ -0.5
VIPAS39-211ENST00000557658 TECRLQ5HYJ1 363 aa11.9□□□□□ -0.5
VIPAS39-211ENST00000557658 NOTUMQ6P988 496 aa11.9□□□□□ -0.5
VIPAS39-211ENST00000557658 CLEC20AQ6ZU45 233 aa11.9□□□□□ -0.5
VIPAS39-211ENST00000557658 LIMS2Q7Z4I7 341 aa11.9□□□□□ -0.5
VIPAS39-211ENST00000557658 GPR180Q86V85 440 aa11.9□□□□□ -0.5
VIPAS39-211ENST00000557658 OSTM1Q86WC4 334 aa11.9□□□□□ -0.5
VIPAS39-211ENST00000557658 KLHDC8BQ8IXV7 354 aa11.9□□□□□ -0.5
VIPAS39-211ENST00000557658 ZNF786Q8N393 782 aa11.9□□□□□ -0.5
VIPAS39-211ENST00000557658 PCYOX1LQ8NBM8 494 aa11.9□□□□□ -0.5
VIPAS39-211ENST00000557658 CANT1Q8WVQ1 401 aa11.9□□□□□ -0.5
VIPAS39-211ENST00000557658 ROPN1LQ96C74 230 aa11.9□□□□□ -0.5
VIPAS39-211ENST00000557658 ULBP1Q9BZM6 244 aa11.9□□□□□ -0.5
VIPAS39-211ENST00000557658 TRIM15Q9C019 465 aa11.9□□□□□ -0.5
VIPAS39-211ENST00000557658 NXF3Q9H4D5 531 aaKnown RBP11.9□□□□□ -0.5
VIPAS39-211ENST00000557658 CHST12Q9NRB3 414 aa11.9□□□□□ -0.5
VIPAS39-211ENST00000557658 IGSF5Q9NSI5 407 aa11.9□□□□□ -0.5
VIPAS39-211ENST00000557658 DDIT4Q9NX09 232 aa11.9□□□□□ -0.5
VIPAS39-211ENST00000557658 CAMSAP3Q9P1Y5 1249 aaPredicted RBP11.9□□□□□ -0.5
VIPAS39-211ENST00000557658 MTF2Q9Y483 593 aaPredicted RBP11.9□□□□□ -0.5
VIPAS39-211ENST00000557658 SRCAPQ6ZRS2 3230 aa11.9□□□□□ -0.5
VIPAS39-211ENST00000557658 SMIM28A0A1B0GU29 152 aa11.9□□□□□ -0.5
VIPAS39-211ENST00000557658 A8MT66 165 aa11.9□□□□□ -0.5
VIPAS39-211ENST00000557658 CACNG3O60359 315 aa11.9□□□□□ -0.5
VIPAS39-211ENST00000557658 ANXA9O76027 345 aa11.9□□□□□ -0.5
VIPAS39-211ENST00000557658 CPB1P15086 417 aa11.9□□□□□ -0.5
VIPAS39-211ENST00000557658 ARSAP15289 507 aa11.9□□□□□ -0.5
VIPAS39-211ENST00000557658 WARSP23381 471 aaKnown RBP11.9□□□□□ -0.5
VIPAS39-211ENST00000557658 MYF6P23409 242 aa11.9□□□□□ -0.5
VIPAS39-211ENST00000557658 AKAP5P24588 427 aa11.9□□□□□ -0.5
VIPAS39-211ENST00000557658 ACADVLP49748 655 aa11.9□□□□□ -0.5
VIPAS39-211ENST00000557658 ENTPD1P49961 510 aa11.9□□□□□ -0.5
VIPAS39-211ENST00000557658 ATP4BP51164 291 aa11.9□□□□□ -0.5
VIPAS39-211ENST00000557658 GJA9P57773 515 aa11.9□□□□□ -0.5
VIPAS39-211ENST00000557658 GRIK4Q16099 956 aa11.9□□□□□ -0.5
VIPAS39-211ENST00000557658 INTS11Q5TA45 600 aaKnown RBP11.9□□□□□ -0.5
VIPAS39-211ENST00000557658 AGAP9Q5VTM2 703 aa11.9□□□□□ -0.5
VIPAS39-211ENST00000557658 ZNF470Q6ECI4 717 aa11.9□□□□□ -0.5
VIPAS39-211ENST00000557658 Q6ZNX1 250 aa11.9□□□□□ -0.5
VIPAS39-211ENST00000557658 PATL1Q86TB9 770 aaKnown RBP11.9□□□□□ -0.5
VIPAS39-211ENST00000557658 SMYD1Q8NB12 490 aa11.9□□□□□ -0.5
VIPAS39-211ENST00000557658 C2CD4AQ8NCU7 369 aaPredicted RBP11.9□□□□□ -0.5
VIPAS39-211ENST00000557658 IPMKQ8NFU5 416 aa11.9□□□□□ -0.5
VIPAS39-211ENST00000557658 SPATA22Q8NHS9 363 aa11.9□□□□□ -0.5
VIPAS39-211ENST00000557658 PPTC7Q8NI37 304 aa11.9□□□□□ -0.5
VIPAS39-211ENST00000557658 TRPM4Q8TD43 1214 aa11.9□□□□□ -0.5
VIPAS39-211ENST00000557658 ADAMTS16Q8TE57 1224 aa11.9□□□□□ -0.5
VIPAS39-211ENST00000557658 PTCD2Q8WV60 388 aaKnown RBP11.9□□□□□ -0.5
VIPAS39-211ENST00000557658 ZUFSPQ96AP4 578 aa11.9□□□□□ -0.5
VIPAS39-211ENST00000557658 CELF6Q96J87 481 aaKnown RBP11.9□□□□□ -0.5
VIPAS39-211ENST00000557658 TSGA13Q96PP4 275 aa11.9□□□□□ -0.5
VIPAS39-211ENST00000557658 TXNRD2Q9NNW7 524 aa11.9□□□□□ -0.5
VIPAS39-211ENST00000557658 CCM2LQ9NUG4 571 aaPredicted RBP11.9□□□□□ -0.5
VIPAS39-211ENST00000557658 EBF1Q9UH73 591 aa11.9□□□□□ -0.5
VIPAS39-211ENST00000557658 TCAF1Q9Y4C2 921 aa11.9□□□□□ -0.5
VIPAS39-211ENST00000557658 NRCAMQ92823 1304 aa11.9□□□□□ -0.5
VIPAS39-211ENST00000557658 YJEFN3A6XGL0 299 aa11.89□□□□□ -0.51
VIPAS39-211ENST00000557658 NCAM1P13591 858 aa11.89□□□□□ -0.51
VIPAS39-211ENST00000557658 ATP6V1B2P21281 511 aa11.89□□□□□ -0.51
VIPAS39-211ENST00000557658 ARNTP27540 789 aa11.89□□□□□ -0.51
VIPAS39-211ENST00000557658 MAP3K7CLP57077 242 aa11.89□□□□□ -0.51
VIPAS39-211ENST00000557658 DAOAP59103 153 aa11.89□□□□□ -0.51
VIPAS39-211ENST00000557658 ZNF33AQ06730 810 aa11.89□□□□□ -0.51
VIPAS39-211ENST00000557658 GALNT1Q10472 559 aaPredicted RBP11.89□□□□□ -0.51
VIPAS39-211ENST00000557658 SFSWAPQ12872 951 aaKnown RBP11.89□□□□□ -0.51
VIPAS39-211ENST00000557658 INPP5AQ14642 412 aa11.89□□□□□ -0.51
VIPAS39-211ENST00000557658 C16orf72Q14CZ0 275 aa11.89□□□□□ -0.51
VIPAS39-211ENST00000557658 Q3C1V9 767 aa11.89□□□□□ -0.51
VIPAS39-211ENST00000557658 TBCELQ5QJ74 424 aa11.89□□□□□ -0.51
VIPAS39-211ENST00000557658 PAQR9Q6ZVX9 377 aa11.89□□□□□ -0.51
VIPAS39-211ENST00000557658 CCDC117Q8IWD4 279 aaPredicted RBP11.89□□□□□ -0.51
VIPAS39-211ENST00000557658 CBR4Q8N4T8 237 aa11.89□□□□□ -0.51
VIPAS39-211ENST00000557658 LZTR1Q8N653 840 aa11.89□□□□□ -0.51
Retrieved 100 of 20,778 RNA–protein pairs in 19.8 ms