RNA–Protein interactions for RNA: ENST00000557358.1

VPS33B-206, Transcript of VPS33B, late endosome and lysosome associated, humanhuman

TSL 4

Gene VPS33B, Length 561 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS33B-206ENST00000557358 PSTPIP1O43586 416 aa13.94□□□□□ -0.18
VPS33B-206ENST00000557358 LZTS3O60299 673 aaPredicted RBP13.94□□□□□ -0.18
VPS33B-206ENST00000557358 MAFKO60675 156 aa13.94□□□□□ -0.18
VPS33B-206ENST00000557358 SOCS5O75159 536 aa13.94□□□□□ -0.18
VPS33B-206ENST00000557358 NDUFA10O95299 355 aa13.94□□□□□ -0.18
VPS33B-206ENST00000557358 CD48P09326 243 aa13.94□□□□□ -0.18
VPS33B-206ENST00000557358 COMTP21964 271 aa13.94□□□□□ -0.18
VPS33B-206ENST00000557358 CCNCP24863 283 aa13.94□□□□□ -0.18
VPS33B-206ENST00000557358 CETN2P41208 172 aa13.94□□□□□ -0.18
VPS33B-206ENST00000557358 GARSP41250 739 aaKnown RBP13.94□□□□□ -0.18
VPS33B-206ENST00000557358 ABL2P42684 1182 aa13.94□□□□□ -0.18
VPS33B-206ENST00000557358 RABIFP47224 123 aa13.94□□□□□ -0.18
VPS33B-206ENST00000557358 ARSEP51690 589 aa13.94□□□□□ -0.18
VPS33B-206ENST00000557358 HADHBP55084 474 aaKnown RBP13.94□□□□□ -0.18
VPS33B-206ENST00000557358 BNC1Q01954 994 aa13.94□□□□□ -0.18
VPS33B-206ENST00000557358 SLC10A7Q0GE19 358 aa13.94□□□□□ -0.18
VPS33B-206ENST00000557358 GALNT2Q10471 571 aa13.94□□□□□ -0.18
VPS33B-206ENST00000557358 TFDP2Q14188 446 aa13.94□□□□□ -0.18
VPS33B-206ENST00000557358 PTK2BQ14289 1009 aa13.94□□□□□ -0.18
VPS33B-206ENST00000557358 ATP13A4Q4VNC1 1196 aa13.94□□□□□ -0.18
VPS33B-206ENST00000557358 TMEM259Q4ZIN3 620 aa13.94□□□□□ -0.18
VPS33B-206ENST00000557358 N4BP2L1Q5TBK1 243 aaPredicted RBP13.94□□□□□ -0.18
VPS33B-206ENST00000557358 RFX6Q8HWS3 928 aa13.94□□□□□ -0.18
VPS33B-206ENST00000557358 TMEM145Q8NBT3 493 aa13.94□□□□□ -0.18
VPS33B-206ENST00000557358 PCDH19Q8TAB3 1148 aa13.94□□□□□ -0.18
VPS33B-206ENST00000557358 LENG8Q96PV6 779 aaPredicted RBP13.94□□□□□ -0.18
VPS33B-206ENST00000557358 RNF157Q96PX1 679 aa13.94□□□□□ -0.18
VPS33B-206ENST00000557358 NUDCD1Q96RS6 583 aa13.94□□□□□ -0.18
VPS33B-206ENST00000557358 C1QTNF2Q9BXJ5 285 aa13.94□□□□□ -0.18
VPS33B-206ENST00000557358 POLR1EQ9GZS1 481 aaKnown RBP13.94□□□□□ -0.18
VPS33B-206ENST00000557358 IL21RQ9HBE5 538 aa13.94□□□□□ -0.18
VPS33B-206ENST00000557358 AMACRQ9UHK6 382 aa13.94□□□□□ -0.18
VPS33B-206ENST00000557358 ZFR2Q9UPR6 939 aaKnown RBP13.94□□□□□ -0.18
VPS33B-206ENST00000557358 ATP8A1Q9Y2Q0 1164 aa13.94□□□□□ -0.18
VPS33B-206ENST00000557358 TTLL3Q9Y4R7 772 aa13.94□□□□□ -0.18
VPS33B-206ENST00000557358 SLCO1B1Q9Y6L6 691 aa13.94□□□□□ -0.18
VPS33B-206ENST00000557358 TMEM131Q92545 1883 aa13.93□□□□□ -0.18
VPS33B-206ENST00000557358 TP53BP1Q12888 1972 aaPredicted RBP13.93□□□□□ -0.18
VPS33B-206ENST00000557358 TSPAN11A1L157 253 aa13.93□□□□□ -0.18
VPS33B-206ENST00000557358 C10orf142B7Z368 130 aa13.93□□□□□ -0.18
VPS33B-206ENST00000557358 H3BM21 787 aa13.93□□□□□ -0.18
VPS33B-206ENST00000557358 KCNK3O14649 394 aa13.93□□□□□ -0.18
VPS33B-206ENST00000557358 PPP1R12AO14974 1030 aaPredicted RBP13.93□□□□□ -0.18
VPS33B-206ENST00000557358 AREL1O15033 823 aa13.93□□□□□ -0.18
VPS33B-206ENST00000557358 MATN3O15232 486 aa13.93□□□□□ -0.18
VPS33B-206ENST00000557358 NRDCO43847 1150 aa13.93□□□□□ -0.18
VPS33B-206ENST00000557358 MFSD11O43934 449 aa13.93□□□□□ -0.18
VPS33B-206ENST00000557358 WNT1P04628 370 aa13.93□□□□□ -0.18
VPS33B-206ENST00000557358 TIMP2P16035 220 aa13.93□□□□□ -0.18
VPS33B-206ENST00000557358 IL4RP24394 825 aa13.93□□□□□ -0.18
VPS33B-206ENST00000557358 THOP1P52888 689 aa13.93□□□□□ -0.18
VPS33B-206ENST00000557358 FAM193AP78312 1265 aa13.93□□□□□ -0.18
VPS33B-206ENST00000557358 PDK1Q15118 436 aa13.93□□□□□ -0.18
VPS33B-206ENST00000557358 TMEM52BQ4KMG9 183 aa13.93□□□□□ -0.18
VPS33B-206ENST00000557358 NCBP2-AS2Q69YL0 99 aa13.93□□□□□ -0.18
VPS33B-206ENST00000557358 KYAT3Q6YP21 454 aaKnown RBP13.93□□□□□ -0.18
VPS33B-206ENST00000557358 Q6ZSR6 202 aa13.93□□□□□ -0.18
VPS33B-206ENST00000557358 DAAM2Q86T65 1068 aa13.93□□□□□ -0.18
VPS33B-206ENST00000557358 CAMK1DQ8IU85 385 aa13.93□□□□□ -0.18
VPS33B-206ENST00000557358 ATL2Q8NHH9 583 aa13.93□□□□□ -0.18
VPS33B-206ENST00000557358 PDCD6IPQ8WUM4 868 aaKnown RBP13.93□□□□□ -0.18
VPS33B-206ENST00000557358 RAPGEF5Q92565 580 aa13.93□□□□□ -0.18
VPS33B-206ENST00000557358 FAF2Q96CS3 445 aa13.93□□□□□ -0.18
VPS33B-206ENST00000557358 MGME1Q9BQP7 344 aa13.93□□□□□ -0.18
VPS33B-206ENST00000557358 BRD8Q9H0E9 1235 aa13.93□□□□□ -0.18
VPS33B-206ENST00000557358 FZD3Q9NPG1 666 aa13.93□□□□□ -0.18
VPS33B-206ENST00000557358 PCDH12Q9NPG4 1184 aa13.93□□□□□ -0.18
VPS33B-206ENST00000557358 EVA1BQ9NVM1 165 aa13.93□□□□□ -0.18
VPS33B-206ENST00000557358 KCTD5Q9NXV2 234 aa13.93□□□□□ -0.18
VPS33B-206ENST00000557358 ANGPTL2Q9UKU9 493 aa13.93□□□□□ -0.18
VPS33B-206ENST00000557358 HEY1Q9Y5J3 304 aa13.93□□□□□ -0.18
VPS33B-206ENST00000557358 ANKRD36A6QL64 1941 aa13.93□□□□□ -0.18
VPS33B-206ENST00000557358 CFAP69A5D8W1 941 aa13.92□□□□□ -0.18
VPS33B-206ENST00000557358 SOWAHDA6NJG2 315 aa13.92□□□□□ -0.18
VPS33B-206ENST00000557358 RNF103O00237 685 aa13.92□□□□□ -0.18
VPS33B-206ENST00000557358 GIPC1O14908 333 aa13.92□□□□□ -0.18
VPS33B-206ENST00000557358 MMP20O60882 483 aa13.92□□□□□ -0.18
VPS33B-206ENST00000557358 ELFN1P0C7U0 828 aa13.92□□□□□ -0.18
VPS33B-206ENST00000557358 ALPPL2P10696 532 aa13.92□□□□□ -0.18
VPS33B-206ENST00000557358 CYP2A6P11509 494 aaPredicted RBP13.92□□□□□ -0.18
VPS33B-206ENST00000557358 RXRGP48443 463 aa13.92□□□□□ -0.18
VPS33B-206ENST00000557358 EPHB1P54762 984 aa13.92□□□□□ -0.18
VPS33B-206ENST00000557358 IL9RQ01113 521 aa13.92□□□□□ -0.18
VPS33B-206ENST00000557358 LRRC73Q5JTD7 316 aa13.92□□□□□ -0.18
VPS33B-206ENST00000557358 ARMC12Q5T9G4 340 aa13.92□□□□□ -0.18
VPS33B-206ENST00000557358 C11orf63Q6NUN7 778 aa13.92□□□□□ -0.18
VPS33B-206ENST00000557358 ABI3BPQ7Z7G0 1075 aa13.92□□□□□ -0.18
VPS33B-206ENST00000557358 CCDC50Q8IVM0 306 aa13.92□□□□□ -0.18
VPS33B-206ENST00000557358 CCDC13Q8IYE1 715 aa13.92□□□□□ -0.18
VPS33B-206ENST00000557358 FATE1Q969F0 183 aa13.92□□□□□ -0.18
VPS33B-206ENST00000557358 HDAC11Q96DB2 347 aa13.92□□□□□ -0.18
VPS33B-206ENST00000557358 IFT43Q96FT9 208 aa13.92□□□□□ -0.18
VPS33B-206ENST00000557358 RBM41Q96IZ5 413 aaKnown RBP13.92□□□□□ -0.18
VPS33B-206ENST00000557358 TSGA13Q96PP4 275 aa13.92□□□□□ -0.18
VPS33B-206ENST00000557358 FERMT1Q9BQL6 677 aa13.92□□□□□ -0.18
VPS33B-206ENST00000557358 WRAP53Q9BUR4 548 aaKnown RBP13.92□□□□□ -0.18
VPS33B-206ENST00000557358 NT5MQ9NPB1 228 aa13.92□□□□□ -0.18
VPS33B-206ENST00000557358 RBM22Q9NW64 420 aaKnown RBP eCLIP13.92□□□□□ -0.18
VPS33B-206ENST00000557358 FTSJ1Q9UET6 329 aa13.92□□□□□ -0.18
VPS33B-206ENST00000557358 PCOLCE2Q9UKZ9 415 aa13.92□□□□□ -0.18
Retrieved 100 of 20,778 RNA–protein pairs in 31.4 ms