RNA–Protein interactions for RNA: ENST00000557311.5

ATXN3-247, Transcript of ataxin 3, humanhuman

TSL 1 (best)

Gene ATXN3, Length 562 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATXN3-247ENST00000557311 NUP210Q8TEM1 1887 aaPredicted RBP5.07□□□□□ -1.6
ATXN3-247ENST00000557311 PCDH15Q96QU1 1955 aa5.06□□□□□ -1.6
ATXN3-247ENST00000557311 BLACEA4D250 179 aa5.06□□□□□ -1.6
ATXN3-247ENST00000557311 PABPN1LA6NDY0 278 aaKnown RBP5.06□□□□□ -1.6
ATXN3-247ENST00000557311 VILLO15195 856 aa5.06□□□□□ -1.6
ATXN3-247ENST00000557311 YKT6O15498 198 aa5.06□□□□□ -1.6
ATXN3-247ENST00000557311 BRINP1O60477 761 aa5.06□□□□□ -1.6
ATXN3-247ENST00000557311 TBCAO75347 108 aaKnown RBP5.06□□□□□ -1.6
ATXN3-247ENST00000557311 TACC1O75410 805 aa5.06□□□□□ -1.6
ATXN3-247ENST00000557311 MMEP08473 750 aa5.06□□□□□ -1.6
ATXN3-247ENST00000557311 TMEM191BP0C7N4 346 aa5.06□□□□□ -1.6
ATXN3-247ENST00000557311 IRF1P10914 325 aa5.06□□□□□ -1.6
ATXN3-247ENST00000557311 PECAM1P16284 738 aaPredicted RBP5.06□□□□□ -1.6
ATXN3-247ENST00000557311 ATP5C1P36542 298 aaKnown RBP5.06□□□□□ -1.6
ATXN3-247ENST00000557311 UBA7P41226 1012 aa5.06□□□□□ -1.6
ATXN3-247ENST00000557311 COPAP53621 1224 aa5.06□□□□□ -1.6
ATXN3-247ENST00000557311 CACNA2D1P54289 1103 aa5.06□□□□□ -1.6
ATXN3-247ENST00000557311 BCAT1P54687 386 aa5.06□□□□□ -1.6
ATXN3-247ENST00000557311 CDH8P55286 799 aa5.06□□□□□ -1.6
ATXN3-247ENST00000557311 C21orf59P57076 290 aa5.06□□□□□ -1.6
ATXN3-247ENST00000557311 TMPRSS3P57727 454 aa5.06□□□□□ -1.6
ATXN3-247ENST00000557311 E2F1Q01094 437 aa5.06□□□□□ -1.6
ATXN3-247ENST00000557311 ZBTB16Q05516 673 aa5.06□□□□□ -1.6
ATXN3-247ENST00000557311 MAP4K2Q12851 820 aa5.06□□□□□ -1.6
ATXN3-247ENST00000557311 DNAJC3Q13217 504 aa5.06□□□□□ -1.6
ATXN3-247ENST00000557311 DHX8Q14562 1220 aaKnown RBP5.06□□□□□ -1.6
ATXN3-247ENST00000557311 SURF1Q15526 300 aa5.06□□□□□ -1.6
ATXN3-247ENST00000557311 ARHGAP40Q5TG30 622 aa5.06□□□□□ -1.6
ATXN3-247ENST00000557311 ARL6IP4Q66PJ3 421 aaKnown RBP5.06□□□□□ -1.6
ATXN3-247ENST00000557311 CD300LDQ6UXZ3 194 aa5.06□□□□□ -1.6
ATXN3-247ENST00000557311 MICALCLQ6ZW33 695 aa5.06□□□□□ -1.6
ATXN3-247ENST00000557311 SPATC1Q76KD6 591 aa5.06□□□□□ -1.6
ATXN3-247ENST00000557311 FAM124AQ86V42 546 aa5.06□□□□□ -1.6
ATXN3-247ENST00000557311 FAM129CQ86XR2 697 aa5.06□□□□□ -1.6
ATXN3-247ENST00000557311 CCDC83Q8IWF9 413 aa5.06□□□□□ -1.6
ATXN3-247ENST00000557311 ARL10Q8N8L6 244 aa5.06□□□□□ -1.6
ATXN3-247ENST00000557311 OR6B3Q8NGW1 331 aa5.06□□□□□ -1.6
ATXN3-247ENST00000557311 OR2T3Q8NH03 318 aa5.06□□□□□ -1.6
ATXN3-247ENST00000557311 SCAMP5Q8TAC9 235 aa5.06□□□□□ -1.6
ATXN3-247ENST00000557311 SAP25Q8TEE9 199 aa5.06□□□□□ -1.6
ATXN3-247ENST00000557311 RFFLQ8WZ73 363 aa5.06□□□□□ -1.6
ATXN3-247ENST00000557311 SEC14L1Q92503 715 aa5.06□□□□□ -1.6
ATXN3-247ENST00000557311 UBXN4Q92575 508 aa5.06□□□□□ -1.6
ATXN3-247ENST00000557311 BIRC7Q96CA5 298 aa5.06□□□□□ -1.6
ATXN3-247ENST00000557311 TSPAN17Q96FV3 270 aa5.06□□□□□ -1.6
ATXN3-247ENST00000557311 CALML4Q96GE6 196 aa5.06□□□□□ -1.6
ATXN3-247ENST00000557311 ANKRD36BP1Q96IX9 119 aa5.06□□□□□ -1.6
ATXN3-247ENST00000557311 SCYL1Q96KG9 808 aa5.06□□□□□ -1.6
ATXN3-247ENST00000557311 AK8Q96MA6 479 aa5.06□□□□□ -1.6
ATXN3-247ENST00000557311 ZNF578Q96N58 590 aaPredicted RBP5.06□□□□□ -1.6
ATXN3-247ENST00000557311 ACCSQ96QU6 501 aa5.06□□□□□ -1.6
ATXN3-247ENST00000557311 SRPK1Q96SB4 655 aaKnown RBP5.06□□□□□ -1.6
ATXN3-247ENST00000557311 MMS19Q96T76 1030 aa5.06□□□□□ -1.6
ATXN3-247ENST00000557311 LGMNQ99538 433 aa5.06□□□□□ -1.6
ATXN3-247ENST00000557311 ELF4Q99607 663 aaPredicted RBP5.06□□□□□ -1.6
ATXN3-247ENST00000557311 KCNJ15Q99712 375 aa5.06□□□□□ -1.6
ATXN3-247ENST00000557311 BAG1Q99933 345 aaPredicted RBP5.06□□□□□ -1.6
ATXN3-247ENST00000557311 MRPL45Q9BRJ2 306 aaKnown RBP5.06□□□□□ -1.6
ATXN3-247ENST00000557311 MAK16Q9BXY0 300 aaKnown RBP5.06□□□□□ -1.6
ATXN3-247ENST00000557311 ACE2Q9BYF1 805 aaPredicted RBP5.06□□□□□ -1.6
ATXN3-247ENST00000557311 B3GNT5Q9BYG0 378 aa5.06□□□□□ -1.6
ATXN3-247ENST00000557311 SEMA4CQ9C0C4 833 aa5.06□□□□□ -1.6
ATXN3-247ENST00000557311 ZNF518BQ9C0D4 1074 aa5.06□□□□□ -1.6
ATXN3-247ENST00000557311 FAM107BQ9H098 131 aa5.06□□□□□ -1.6
ATXN3-247ENST00000557311 BTBD1Q9H0C5 482 aa5.06□□□□□ -1.6
ATXN3-247ENST00000557311 C6orf106Q9H6K1 298 aaPredicted RBP5.06□□□□□ -1.6
ATXN3-247ENST00000557311 INTS13Q9NVM9 706 aa5.06□□□□□ -1.6
ATXN3-247ENST00000557311 ELOVL2Q9NXB9 296 aa5.06□□□□□ -1.6
ATXN3-247ENST00000557311 RBAKQ9NYW8 714 aaPredicted RBP5.06□□□□□ -1.6
ATXN3-247ENST00000557311 ZKSCAN7Q9P0L1 754 aaPredicted RBP5.06□□□□□ -1.6
ATXN3-247ENST00000557311 C6orf203Q9P0P8 240 aaPredicted RBP5.06□□□□□ -1.6
ATXN3-247ENST00000557311 SPATA7Q9P0W8 599 aa5.06□□□□□ -1.6
ATXN3-247ENST00000557311 IL17BQ9UHF5 180 aa5.06□□□□□ -1.6
ATXN3-247ENST00000557311 SIX4Q9UIU6 781 aa5.06□□□□□ -1.6
ATXN3-247ENST00000557311 CLCA2Q9UQC9 943 aa5.06□□□□□ -1.6
ATXN3-247ENST00000557311 ZNF510Q9Y2H8 683 aa5.06□□□□□ -1.6
ATXN3-247ENST00000557311 SLCO1B1Q9Y6L6 691 aa5.06□□□□□ -1.6
ATXN3-247ENST00000557311 ARID2Q68CP9 1835 aa5.06□□□□□ -1.6
ATXN3-247ENST00000557311 PLXNB3Q9ULL4 1909 aa5.05□□□□□ -1.6
ATXN3-247ENST00000557311 PTPRJQ12913 1337 aa5.05□□□□□ -1.6
ATXN3-247ENST00000557311 FAM92AA1XBS5 289 aa5.05□□□□□ -1.6
ATXN3-247ENST00000557311 VWA3AA6NCI4 1184 aa5.05□□□□□ -1.6
ATXN3-247ENST00000557311 GOLGA6L10A6NI86 522 aa5.05□□□□□ -1.6
ATXN3-247ENST00000557311 A8MXQ7 604 aa5.05□□□□□ -1.6
ATXN3-247ENST00000557311 PYCARD-AS1I3L0S3 204 aa5.05□□□□□ -1.6
ATXN3-247ENST00000557311 CLDN5O00501 218 aa5.05□□□□□ -1.6
ATXN3-247ENST00000557311 DLX3O60479 287 aa5.05□□□□□ -1.6
ATXN3-247ENST00000557311 TLR5O60602 858 aa5.05□□□□□ -1.6
ATXN3-247ENST00000557311 FSBPO95073 299 aa5.05□□□□□ -1.6
ATXN3-247ENST00000557311 SEMA4FO95754 770 aa5.05□□□□□ -1.6
ATXN3-247ENST00000557311 TBX18O95935 607 aa5.05□□□□□ -1.6
ATXN3-247ENST00000557311 TNNC2P02585 160 aa5.05□□□□□ -1.6
ATXN3-247ENST00000557311 ABCB4P21439 1286 aa5.05□□□□□ -1.6
ATXN3-247ENST00000557311 ACSL1P33121 698 aa5.05□□□□□ -1.6
ATXN3-247ENST00000557311 DDIT3P35638 169 aa5.05□□□□□ -1.6
ATXN3-247ENST00000557311 CHKAP35790 457 aa5.05□□□□□ -1.6
ATXN3-247ENST00000557311 ACADVLP49748 655 aa5.05□□□□□ -1.6
ATXN3-247ENST00000557311 NEK4P51957 841 aa5.05□□□□□ -1.6
ATXN3-247ENST00000557311 MFAP3P55082 362 aa5.05□□□□□ -1.6
ATXN3-247ENST00000557311 CLDN6P56747 220 aa5.05□□□□□ -1.6
Retrieved 100 of 20,778 RNA–protein pairs in 33.5 ms