RNA–Protein interactions for RNA: ENST00000557030.5

ATXN3-246, Transcript of ataxin 3, humanhuman

TSL 1 (best)

Gene ATXN3, Length 807 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATXN3-246ENST00000557030 TRAPPC3O43617 180 aa4.94□□□□□ -1.62
ATXN3-246ENST00000557030 NCK2O43639 380 aa4.94□□□□□ -1.62
ATXN3-246ENST00000557030 CCNT1O60563 726 aaKnown RBP4.94□□□□□ -1.62
ATXN3-246ENST00000557030 PALMO75781 387 aa4.94□□□□□ -1.62
ATXN3-246ENST00000557030 FLOT1O75955 427 aa4.94□□□□□ -1.62
ATXN3-246ENST00000557030 GFPT2O94808 682 aa4.94□□□□□ -1.62
ATXN3-246ENST00000557030 KRT14P02533 472 aa4.94□□□□□ -1.62
ATXN3-246ENST00000557030 MT-ND5P03915 603 aa4.94□□□□□ -1.62
ATXN3-246ENST00000557030 LDHCP07864 332 aa4.94□□□□□ -1.62
ATXN3-246ENST00000557030 GSTA1P08263 222 aa4.94□□□□□ -1.62
ATXN3-246ENST00000557030 PLEKP08567 350 aaPredicted RBP4.94□□□□□ -1.62
ATXN3-246ENST00000557030 NPSP0C0P6 89 aa4.94□□□□□ -1.62
ATXN3-246ENST00000557030 HGFP14210 728 aa4.94□□□□□ -1.62
ATXN3-246ENST00000557030 CALRP27797 417 aaKnown RBP4.94□□□□□ -1.62
ATXN3-246ENST00000557030 CTGFP29279 349 aa4.94□□□□□ -1.62
ATXN3-246ENST00000557030 CTNNA1P35221 906 aaKnown RBP4.94□□□□□ -1.62
ATXN3-246ENST00000557030 EPS15P42566 896 aa4.94□□□□□ -1.62
ATXN3-246ENST00000557030 SLC1A4P43007 532 aa4.94□□□□□ -1.62
ATXN3-246ENST00000557030 NOVP48745 357 aa4.94□□□□□ -1.62
ATXN3-246ENST00000557030 CPT1AP50416 773 aa4.94□□□□□ -1.62
ATXN3-246ENST00000557030 CASP5P51878 434 aa4.94□□□□□ -1.62
ATXN3-246ENST00000557030 GSTO1P78417 241 aa4.94□□□□□ -1.62
ATXN3-246ENST00000557030 FKBP3Q00688 224 aaKnown RBP4.94□□□□□ -1.62
ATXN3-246ENST00000557030 KLHL30Q0D2K2 578 aa4.94□□□□□ -1.62
ATXN3-246ENST00000557030 IFT88Q13099 833 aa4.94□□□□□ -1.62
ATXN3-246ENST00000557030 CCNIQ14094 377 aa4.94□□□□□ -1.62
ATXN3-246ENST00000557030 SLMAPQ14BN4 828 aa4.94□□□□□ -1.62
ATXN3-246ENST00000557030 GPR162Q16538 588 aa4.94□□□□□ -1.62
ATXN3-246ENST00000557030 SLC4A8Q2Y0W8 1093 aa4.94□□□□□ -1.62
ATXN3-246ENST00000557030 ODF2Q5BJF6 829 aa4.94□□□□□ -1.62
ATXN3-246ENST00000557030 FAM83BQ5T0W9 1011 aa4.94□□□□□ -1.62
ATXN3-246ENST00000557030 WLSQ5T9L3 541 aa4.94□□□□□ -1.62
ATXN3-246ENST00000557030 KRT79Q5XKE5 535 aa4.94□□□□□ -1.62
ATXN3-246ENST00000557030 KCTD16Q68DU8 428 aa4.94□□□□□ -1.62
ATXN3-246ENST00000557030 Q6ZWC4 215 aa4.94□□□□□ -1.62
ATXN3-246ENST00000557030 PARS2Q7L3T8 475 aaKnown RBP4.94□□□□□ -1.62
ATXN3-246ENST00000557030 ZNF804AQ7Z570 1209 aa4.94□□□□□ -1.62
ATXN3-246ENST00000557030 HOOK3Q86VS8 718 aa4.94□□□□□ -1.62
ATXN3-246ENST00000557030 MYOCDQ8IZQ8 938 aa4.94□□□□□ -1.62
ATXN3-246ENST00000557030 SPICE1Q8N0Z3 855 aa4.94□□□□□ -1.62
ATXN3-246ENST00000557030 CCDC33Q8N5R6 958 aa4.94□□□□□ -1.62
ATXN3-246ENST00000557030 SLC44A5Q8NCS7 719 aa4.94□□□□□ -1.62
ATXN3-246ENST00000557030 KIAA0895Q8NCT3 520 aa4.94□□□□□ -1.62
ATXN3-246ENST00000557030 TBC1D16Q8TBP0 767 aa4.94□□□□□ -1.62
ATXN3-246ENST00000557030 SCFD2Q8WU76 684 aa4.94□□□□□ -1.62
ATXN3-246ENST00000557030 RAD54LQ92698 747 aa4.94□□□□□ -1.62
ATXN3-246ENST00000557030 RBM17Q96I25 401 aaKnown RBP4.94□□□□□ -1.62
ATXN3-246ENST00000557030 TNIP3Q96KP6 325 aa4.94□□□□□ -1.62
ATXN3-246ENST00000557030 NAP1L3Q99457 506 aaPredicted RBP4.94□□□□□ -1.62
ATXN3-246ENST00000557030 ARPC5LQ9BPX5 153 aa4.94□□□□□ -1.62
ATXN3-246ENST00000557030 MACROD1Q9BQ69 325 aa4.94□□□□□ -1.62
ATXN3-246ENST00000557030 NSRP1Q9H0G5 558 aaKnown RBP4.94□□□□□ -1.62
ATXN3-246ENST00000557030 RAB17Q9H0T7 212 aa4.94□□□□□ -1.62
ATXN3-246ENST00000557030 STMN4Q9H169 189 aaPredicted RBP4.94□□□□□ -1.62
ATXN3-246ENST00000557030 CD209Q9NNX6 404 aa4.94□□□□□ -1.62
ATXN3-246ENST00000557030 SLC40A1Q9NP59 571 aa4.94□□□□□ -1.62
ATXN3-246ENST00000557030 NLRC4Q9NPP4 1024 aa4.94□□□□□ -1.62
ATXN3-246ENST00000557030 MCM9Q9NXL9 1143 aa4.94□□□□□ -1.62
ATXN3-246ENST00000557030 AIPL1Q9NZN9 384 aa4.94□□□□□ -1.62
ATXN3-246ENST00000557030 ZNF212Q9UDV6 495 aa4.94□□□□□ -1.62
ATXN3-246ENST00000557030 POLLQ9UGP5 575 aa4.94□□□□□ -1.62
ATXN3-246ENST00000557030 MAD2L2Q9UI95 211 aa4.94□□□□□ -1.62
ATXN3-246ENST00000557030 ADAMTS5Q9UNA0 930 aa4.94□□□□□ -1.62
ATXN3-246ENST00000557030 DAAM1Q9Y4D1 1078 aa4.94□□□□□ -1.62
ATXN3-246ENST00000557030 CEP83Q9Y592 693 aa4.94□□□□□ -1.62
ATXN3-246ENST00000557030 LRRC37AA6NMS7 1700 aa4.94□□□□□ -1.62
ATXN3-246ENST00000557030 NAV1Q8NEY1 1877 aa4.94□□□□□ -1.62
ATXN3-246ENST00000557030 CDK5RAP2Q96SN8 1893 aa4.94□□□□□ -1.62
ATXN3-246ENST00000557030 GAKO14976 1311 aa4.94□□□□□ -1.62
ATXN3-246ENST00000557030 GOLGA6L10A0A0M3HER8 536 aa4.93□□□□□ -1.62
ATXN3-246ENST00000557030 SMCO2A6NFE2 343 aa4.93□□□□□ -1.62
ATXN3-246ENST00000557030 CFAP73A6NFT4 308 aa4.93□□□□□ -1.62
ATXN3-246ENST00000557030 MYMKA6NI61 221 aa4.93□□□□□ -1.62
ATXN3-246ENST00000557030 TISP43B9A030 160 aa4.93□□□□□ -1.62
ATXN3-246ENST00000557030 CD3EAPO15446 510 aaKnown RBP4.93□□□□□ -1.62
ATXN3-246ENST00000557030 RAD51CO43502 376 aa4.93□□□□□ -1.62
ATXN3-246ENST00000557030 BUB1O43683 1085 aa4.93□□□□□ -1.62
ATXN3-246ENST00000557030 CYTH3O43739 400 aa4.93□□□□□ -1.62
ATXN3-246ENST00000557030 BBOX1O75936 387 aa4.93□□□□□ -1.62
ATXN3-246ENST00000557030 UFL1O94874 794 aa4.93□□□□□ -1.62
ATXN3-246ENST00000557030 BAG3O95817 575 aa4.93□□□□□ -1.62
ATXN3-246ENST00000557030 TSPY3P0CV98 308 aa4.93□□□□□ -1.62
ATXN3-246ENST00000557030 TSPY8P0CW00 308 aa4.93□□□□□ -1.62
ATXN3-246ENST00000557030 CDK4P11802 303 aa4.93□□□□□ -1.62
ATXN3-246ENST00000557030 GCFC2P16383 781 aaKnown RBP4.93□□□□□ -1.62
ATXN3-246ENST00000557030 TPH1P17752 444 aa4.93□□□□□ -1.62
ATXN3-246ENST00000557030 IL1R2P27930 398 aa4.93□□□□□ -1.62
ATXN3-246ENST00000557030 ELF1P32519 619 aa4.93□□□□□ -1.62
ATXN3-246ENST00000557030 HPDP32754 393 aaPredicted RBP4.93□□□□□ -1.62
ATXN3-246ENST00000557030 HSD17B3P37058 310 aa4.93□□□□□ -1.62
ATXN3-246ENST00000557030 TECP42680 631 aa4.93□□□□□ -1.62
ATXN3-246ENST00000557030 BTDP43251 543 aa4.93□□□□□ -1.62
ATXN3-246ENST00000557030 MRPL12P52815 198 aaKnown RBP4.93□□□□□ -1.62
ATXN3-246ENST00000557030 KRTAP10-11P60412 298 aa4.93□□□□□ -1.62
ATXN3-246ENST00000557030 CYP4F2P78329 520 aa4.93□□□□□ -1.62
ATXN3-246ENST00000557030 E2F1Q01094 437 aa4.93□□□□□ -1.62
ATXN3-246ENST00000557030 GFPT1Q06210 699 aaPredicted RBP4.93□□□□□ -1.62
ATXN3-246ENST00000557030 SRSF4Q08170 494 aaKnown RBP4.93□□□□□ -1.62
ATXN3-246ENST00000557030 XRCC4Q13426 336 aa4.93□□□□□ -1.62
ATXN3-246ENST00000557030 DAG1Q14118 895 aa4.93□□□□□ -1.62
Retrieved 100 of 20,778 RNA–protein pairs in 37.2 ms