RNA–Protein interactions for RNA: ENST00000556952.3

SIX4-203, Transcript of SIX homeobox 4, humanhuman

TSL 5

Gene SIX4, Length 1,573 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SIX4-203ENST00000556952 RAI2Q9Y5P3 530 aa23.95■■□□□ 1.42
SIX4-203ENST00000556952 AGPSO00116 658 aa23.94■■□□□ 1.42
SIX4-203ENST00000556952 SHBGP04278 402 aa23.94■■□□□ 1.42
SIX4-203ENST00000556952 STX2P32856 288 aa23.94■■□□□ 1.42
SIX4-203ENST00000556952 CHRNA4P43681 627 aa23.94■■□□□ 1.42
SIX4-203ENST00000556952 CRADDP78560 199 aa23.94■■□□□ 1.42
SIX4-203ENST00000556952 SIRPB2Q5JXA9 342 aa23.94■■□□□ 1.42
SIX4-203ENST00000556952 CAPN12Q6ZSI9 719 aa23.94■■□□□ 1.42
SIX4-203ENST00000556952 OR2W6PQ8NHA6 318 aa23.94■■□□□ 1.42
SIX4-203ENST00000556952 UHMK1Q8TAS1 419 aaKnown RBP23.94■■□□□ 1.42
SIX4-203ENST00000556952 GSDMBQ8TAX9 411 aa23.94■■□□□ 1.42
SIX4-203ENST00000556952 CYB5D2Q8WUJ1 264 aa23.94■■□□□ 1.42
SIX4-203ENST00000556952 NSMCE3Q96MG7 304 aa23.94■■□□□ 1.42
SIX4-203ENST00000556952 TMEM109Q9BVC6 243 aa23.94■■□□□ 1.42
SIX4-203ENST00000556952 TNKS2Q9H2K2 1166 aa23.94■■□□□ 1.42
SIX4-203ENST00000556952 TRPV5Q9NQA5 729 aa23.94■■□□□ 1.42
SIX4-203ENST00000556952 SOX13Q9UN79 622 aa23.94■■□□□ 1.42
SIX4-203ENST00000556952 F5P12259 2224 aa23.94■■□□□ 1.42
SIX4-203ENST00000556952 SOCS5O75159 536 aa23.93■■□□□ 1.42
SIX4-203ENST00000556952 POLBP06746 335 aa23.93■■□□□ 1.42
SIX4-203ENST00000556952 IVLP07476 585 aa23.93■■□□□ 1.42
SIX4-203ENST00000556952 ST8SIA6P61647 398 aa23.93■■□□□ 1.42
SIX4-203ENST00000556952 ZNF844Q08AG5 666 aa23.93■■□□□ 1.42
SIX4-203ENST00000556952 ACCSLQ4AC99 568 aa23.93■■□□□ 1.42
SIX4-203ENST00000556952 SLC44A4Q53GD3 710 aa23.93■■□□□ 1.42
SIX4-203ENST00000556952 PCID2Q5JVF3 399 aa23.93■■□□□ 1.42
SIX4-203ENST00000556952 UNC5AQ6ZN44 842 aa23.93■■□□□ 1.42
SIX4-203ENST00000556952 NUDT18Q6ZVK8 323 aa23.93■■□□□ 1.42
SIX4-203ENST00000556952 SLC25A41Q8N5S1 370 aa23.93■■□□□ 1.42
SIX4-203ENST00000556952 CHFRQ96EP1 664 aa23.93■■□□□ 1.42
SIX4-203ENST00000556952 TUBGCP5Q96RT8 1024 aa23.93■■□□□ 1.42
SIX4-203ENST00000556952 ADGRE3Q9BY15 652 aa23.93■■□□□ 1.42
SIX4-203ENST00000556952 ROPN1BQ9BZX4 212 aaPredicted RBP23.93■■□□□ 1.42
SIX4-203ENST00000556952 ATP13A3Q9H7F0 1226 aa23.93■■□□□ 1.42
SIX4-203ENST00000556952 PPCSQ9HAB8 311 aa23.93■■□□□ 1.42
SIX4-203ENST00000556952 ROPN1Q9HAT0 212 aaPredicted RBP23.93■■□□□ 1.42
SIX4-203ENST00000556952 MRM3Q9HC36 420 aaKnown RBP23.93■■□□□ 1.42
SIX4-203ENST00000556952 SLCO3A1Q9UIG8 710 aa23.93■■□□□ 1.42
SIX4-203ENST00000556952 FAM237BA0A1B0GVD1 139 aa23.92■■□□□ 1.42
SIX4-203ENST00000556952 PRRT4C9JH25 899 aa23.92■■□□□ 1.42
SIX4-203ENST00000556952 OPA1O60313 960 aa23.92■■□□□ 1.42
SIX4-203ENST00000556952 TCEA3O75764 348 aa23.92■■□□□ 1.42
SIX4-203ENST00000556952 TPH1P17752 444 aa23.92■■□□□ 1.42
SIX4-203ENST00000556952 SOX9P48436 509 aa23.92■■□□□ 1.42
SIX4-203ENST00000556952 GRM3Q14832 879 aa23.92■■□□□ 1.42
SIX4-203ENST00000556952 MLF2Q15773 248 aaPredicted RBP23.92■■□□□ 1.42
SIX4-203ENST00000556952 PTPRNQ16849 979 aa23.92■■□□□ 1.42
SIX4-203ENST00000556952 CARD16Q5EG05 197 aa23.92■■□□□ 1.42
SIX4-203ENST00000556952 SPANXN3Q5MJ09 141 aa23.92■■□□□ 1.42
SIX4-203ENST00000556952 CEP85LQ5SZL2 805 aa23.92■■□□□ 1.42
SIX4-203ENST00000556952 SUGP1Q8IWZ8 645 aaKnown RBP23.92■■□□□ 1.42
SIX4-203ENST00000556952 PPHLN1Q8NEY8 458 aaKnown RBP23.92■■□□□ 1.42
SIX4-203ENST00000556952 UCMAQ8WVF2 138 aa23.92■■□□□ 1.42
SIX4-203ENST00000556952 MYO19Q96H55 970 aa23.92■■□□□ 1.42
SIX4-203ENST00000556952 RANBP9Q96S59 729 aa23.92■■□□□ 1.42
SIX4-203ENST00000556952 KIFC1Q9BW19 673 aa23.92■■□□□ 1.42
SIX4-203ENST00000556952 ACSS3Q9H6R3 686 aa23.92■■□□□ 1.42
SIX4-203ENST00000556952 EVLQ9UI08 416 aaPredicted RBP23.92■■□□□ 1.42
SIX4-203ENST00000556952 PLA2G4CQ9UP65 541 aa23.92■■□□□ 1.42
SIX4-203ENST00000556952 TCRBV9S1A1TA0A576 114 aa23.91■■□□□ 1.42
SIX4-203ENST00000556952 GOLGA6L10A6NI86 522 aa23.91■■□□□ 1.42
SIX4-203ENST00000556952 SHISA7A6NL88 538 aa23.91■■□□□ 1.42
SIX4-203ENST00000556952 USP1O94782 785 aa23.91■■□□□ 1.42
SIX4-203ENST00000556952 RAD51Q06609 339 aa23.91■■□□□ 1.42
SIX4-203ENST00000556952 BCL2L1Q07817 233 aa23.91■■□□□ 1.42
SIX4-203ENST00000556952 MESP2Q0VG99 397 aa23.91■■□□□ 1.42
SIX4-203ENST00000556952 TRAF2Q12933 501 aa23.91■■□□□ 1.42
SIX4-203ENST00000556952 CRYMQ14894 314 aa23.91■■□□□ 1.42
SIX4-203ENST00000556952 KLHL38Q2WGJ6 581 aa23.91■■□□□ 1.42
SIX4-203ENST00000556952 CYS1Q717R9 158 aa23.91■■□□□ 1.42
SIX4-203ENST00000556952 TMEM135Q86UB9 458 aa23.91■■□□□ 1.42
SIX4-203ENST00000556952 GOLGA6L1Q8N7Z2 621 aa23.91■■□□□ 1.42
SIX4-203ENST00000556952 FBF1Q8TES7 1133 aa23.91■■□□□ 1.42
SIX4-203ENST00000556952 FRS2Q8WU20 508 aa23.91■■□□□ 1.42
SIX4-203ENST00000556952 SORCS1Q8WY21 1168 aa23.91■■□□□ 1.42
SIX4-203ENST00000556952 SH3GL2Q99962 352 aa23.91■■□□□ 1.42
SIX4-203ENST00000556952 CPEB1Q9BZB8 566 aaKnown RBP23.91■■□□□ 1.42
SIX4-203ENST00000556952 PLAC1Q9HBJ0 212 aa23.91■■□□□ 1.42
SIX4-203ENST00000556952 MED4Q9NPJ6 270 aa23.91■■□□□ 1.42
SIX4-203ENST00000556952 HECAQ9UBI9 543 aaPredicted RBP23.91■■□□□ 1.42
SIX4-203ENST00000556952 FETUBQ9UGM5 382 aa23.91■■□□□ 1.42
SIX4-203ENST00000556952 CHKBQ9Y259 395 aa23.91■■□□□ 1.42
SIX4-203ENST00000556952 PCDHGC4Q9Y5F7 938 aa23.91■■□□□ 1.42
SIX4-203ENST00000556952 ZDBF2Q9HCK1 2354 aa23.91■■□□□ 1.42
SIX4-203ENST00000556952 FZD6O60353 706 aa23.91■■□□□ 1.42
SIX4-203ENST00000556952 KAT7O95251 611 aa23.91■■□□□ 1.42
SIX4-203ENST00000556952 ADRA1DP25100 572 aa23.91■■□□□ 1.42
SIX4-203ENST00000556952 SERPINA4P29622 427 aa23.91■■□□□ 1.42
SIX4-203ENST00000556952 GRIA2P42262 883 aa23.91■■□□□ 1.42
SIX4-203ENST00000556952 RECQLP46063 649 aaPredicted RBP23.91■■□□□ 1.42
SIX4-203ENST00000556952 CCNHP51946 323 aaPredicted RBP23.91■■□□□ 1.42
SIX4-203ENST00000556952 FRG1Q14331 258 aaKnown RBP23.91■■□□□ 1.42
SIX4-203ENST00000556952 GALNT3Q14435 633 aa23.91■■□□□ 1.42
SIX4-203ENST00000556952 POU6F1Q14863 301 aa23.91■■□□□ 1.42
SIX4-203ENST00000556952 MYLK3Q32MK0 819 aa23.91■■□□□ 1.42
SIX4-203ENST00000556952 RYBPQ8N488 228 aaPredicted RBP23.91■■□□□ 1.42
SIX4-203ENST00000556952 RABGEF1Q9UJ41 708 aa23.91■■□□□ 1.42
SIX4-203ENST00000556952 TCAF1Q9Y4C2 921 aa23.91■■□□□ 1.42
SIX4-203ENST00000556952 RPS6KL1Q9Y6S9 549 aa23.91■■□□□ 1.42
SIX4-203ENST00000556952 EXOC1LA0A1B0GW35 172 aa23.9■■□□□ 1.42
Retrieved 100 of 20,778 RNA–protein pairs in 44.6 ms