RNA–Protein interactions for RNA: ENST00000556486.5

SCFD1-220, Transcript of sec1 family domain containing 1, humanhuman

TSL 2

Gene SCFD1, Length 974 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCFD1-220ENST00000556486 ALPPL2P10696 532 aa10.21□□□□□ -0.77
SCFD1-220ENST00000556486 HGFP14210 728 aa10.21□□□□□ -0.77
SCFD1-220ENST00000556486 ITGB6P18564 788 aa10.21□□□□□ -0.77
SCFD1-220ENST00000556486 CXCR3P49682 368 aa10.21□□□□□ -0.77
SCFD1-220ENST00000556486 CDH4P55283 916 aa10.21□□□□□ -0.77
SCFD1-220ENST00000556486 SNX16P57768 344 aa10.21□□□□□ -0.77
SCFD1-220ENST00000556486 TAS2R38P59533 333 aa10.21□□□□□ -0.77
SCFD1-220ENST00000556486 ZNF177Q13360 481 aaPredicted RBP10.21□□□□□ -0.77
SCFD1-220ENST00000556486 BECN1Q14457 450 aa10.21□□□□□ -0.77
SCFD1-220ENST00000556486 TCEA2Q15560 299 aa10.21□□□□□ -0.77
SCFD1-220ENST00000556486 EXOC3L4Q17RC7 722 aa10.21□□□□□ -0.77
SCFD1-220ENST00000556486 BRMS1LQ5PSV4 323 aa10.21□□□□□ -0.77
SCFD1-220ENST00000556486 OTUD1Q5VV17 481 aaPredicted RBP10.21□□□□□ -0.77
SCFD1-220ENST00000556486 ZNF574Q6ZN55 896 aaPredicted RBP10.21□□□□□ -0.77
SCFD1-220ENST00000556486 GBP6Q6ZN66 633 aa10.21□□□□□ -0.77
SCFD1-220ENST00000556486 C11orf57Q6ZUT1 292 aaPredicted RBP10.21□□□□□ -0.77
SCFD1-220ENST00000556486 VASH2Q86V25 355 aa10.21□□□□□ -0.77
SCFD1-220ENST00000556486 PTRH1Q86Y79 214 aaKnown RBP10.21□□□□□ -0.77
SCFD1-220ENST00000556486 JAMLQ86YT9 394 aa10.21□□□□□ -0.77
SCFD1-220ENST00000556486 IRF2BP1Q8IU81 584 aa10.21□□□□□ -0.77
SCFD1-220ENST00000556486 CCNJLQ8IV13 435 aa10.21□□□□□ -0.77
SCFD1-220ENST00000556486 RPRD1AQ96P16 312 aaPredicted RBP10.21□□□□□ -0.77
SCFD1-220ENST00000556486 NPY6RQ99463 290 aa10.21□□□□□ -0.77
SCFD1-220ENST00000556486 STARD5Q9NSY2 213 aa10.21□□□□□ -0.77
SCFD1-220ENST00000556486 KLHL11Q9NVR0 708 aa10.21□□□□□ -0.77
SCFD1-220ENST00000556486 ARHGEF38Q9NXL2 777 aa10.21□□□□□ -0.77
SCFD1-220ENST00000556486 NLGN3Q9NZ94 848 aa10.21□□□□□ -0.77
SCFD1-220ENST00000556486 SLC25A13Q9UJS0 675 aa10.21□□□□□ -0.77
SCFD1-220ENST00000556486 HS3ST4Q9Y661 456 aa10.21□□□□□ -0.77
SCFD1-220ENST00000556486 IGLV3-10A0A075B6K4 115 aa10.2□□□□□ -0.78
SCFD1-220ENST00000556486 I6L893 689 aaPredicted RBP10.2□□□□□ -0.78
SCFD1-220ENST00000556486 BIN1O00499 593 aa10.2□□□□□ -0.78
SCFD1-220ENST00000556486 PAGE1O75459 146 aa10.2□□□□□ -0.78
SCFD1-220ENST00000556486 GP1BAP07359 652 aa10.2□□□□□ -0.78
SCFD1-220ENST00000556486 SRCP12931 536 aa10.2□□□□□ -0.78
SCFD1-220ENST00000556486 ZNF18P17022 549 aa10.2□□□□□ -0.78
SCFD1-220ENST00000556486 SLC9A1P19634 815 aa10.2□□□□□ -0.78
SCFD1-220ENST00000556486 PON1P27169 355 aa10.2□□□□□ -0.78
SCFD1-220ENST00000556486 CDH5P33151 784 aaPredicted RBP10.2□□□□□ -0.78
SCFD1-220ENST00000556486 IRAK1P51617 712 aa10.2□□□□□ -0.78
SCFD1-220ENST00000556486 PDX1P52945 283 aa10.2□□□□□ -0.78
SCFD1-220ENST00000556486 STX17P56962 302 aa10.2□□□□□ -0.78
SCFD1-220ENST00000556486 SLC6A3Q01959 620 aa10.2□□□□□ -0.78
SCFD1-220ENST00000556486 CCDC15Q0P6D6 951 aa10.2□□□□□ -0.78
SCFD1-220ENST00000556486 DLG2Q15700 870 aa10.2□□□□□ -0.78
SCFD1-220ENST00000556486 IGFBP7Q16270 282 aa10.2□□□□□ -0.78
SCFD1-220ENST00000556486 PTPN20Q4JDL3 420 aa10.2□□□□□ -0.78
SCFD1-220ENST00000556486 ARTNQ5T4W7 220 aa10.2□□□□□ -0.78
SCFD1-220ENST00000556486 PIP5KL1Q5T9C9 394 aa10.2□□□□□ -0.78
SCFD1-220ENST00000556486 SEL1L3Q68CR1 1132 aa10.2□□□□□ -0.78
SCFD1-220ENST00000556486 GJB7Q6PEY0 223 aa10.2□□□□□ -0.78
SCFD1-220ENST00000556486 GCNT7Q6ZNI0 430 aa10.2□□□□□ -0.78
SCFD1-220ENST00000556486 RBM44Q6ZP01 1051 aaKnown RBP10.2□□□□□ -0.78
SCFD1-220ENST00000556486 FAM183BPQ6ZVS7 135 aa10.2□□□□□ -0.78
SCFD1-220ENST00000556486 SETD3Q86TU7 594 aaPredicted RBP10.2□□□□□ -0.78
SCFD1-220ENST00000556486 ARL14Q8N4G2 192 aa10.2□□□□□ -0.78
SCFD1-220ENST00000556486 DCAF4L2Q8NA75 395 aa10.2□□□□□ -0.78
SCFD1-220ENST00000556486 ZNF548Q8NEK5 533 aaPredicted RBP10.2□□□□□ -0.78
SCFD1-220ENST00000556486 TMIEQ8NEW7 156 aa10.2□□□□□ -0.78
SCFD1-220ENST00000556486 OR2A12Q8NGT7 310 aa10.2□□□□□ -0.78
SCFD1-220ENST00000556486 C1orf74Q96LT6 269 aa10.2□□□□□ -0.78
SCFD1-220ENST00000556486 CRACR2AQ9BSW2 395 aa10.2□□□□□ -0.78
SCFD1-220ENST00000556486 GSX2Q9BZM3 304 aa10.2□□□□□ -0.78
SCFD1-220ENST00000556486 BRINP2Q9C0B6 783 aa10.2□□□□□ -0.78
SCFD1-220ENST00000556486 SIX2Q9NPC8 291 aa10.2□□□□□ -0.78
SCFD1-220ENST00000556486 GPR27Q9NS67 375 aa10.2□□□□□ -0.78
SCFD1-220ENST00000556486 KLF15Q9UIH9 416 aa10.2□□□□□ -0.78
SCFD1-220ENST00000556486 VPS28Q9UK41 221 aa10.2□□□□□ -0.78
SCFD1-220ENST00000556486 VANGL2Q9ULK5 521 aa10.2□□□□□ -0.78
SCFD1-220ENST00000556486 TLN1Q9Y490 2541 aaKnown RBP10.2□□□□□ -0.78
SCFD1-220ENST00000556486 PAXBP1Q9Y5B6 917 aa10.2□□□□□ -0.78
SCFD1-220ENST00000556486 NBPF19A0A087WUL8 3843 aa10.2□□□□□ -0.78
SCFD1-220ENST00000556486 USP9XQ93008 2570 aaPredicted RBP10.19□□□□□ -0.78
SCFD1-220ENST00000556486 DRGXA6NNA5 263 aa10.19□□□□□ -0.78
SCFD1-220ENST00000556486 SCAMP1O15126 338 aa10.19□□□□□ -0.78
SCFD1-220ENST00000556486 F9P00740 461 aa10.19□□□□□ -0.78
SCFD1-220ENST00000556486 ERBB2P04626 1255 aa10.19□□□□□ -0.78
SCFD1-220ENST00000556486 RARAP10276 462 aa10.19□□□□□ -0.78
SCFD1-220ENST00000556486 SLC5A2P31639 672 aa10.19□□□□□ -0.78
SCFD1-220ENST00000556486 GABRB2P47870 512 aa10.19□□□□□ -0.78
SCFD1-220ENST00000556486 DUSP3P51452 185 aaPredicted RBP10.19□□□□□ -0.78
SCFD1-220ENST00000556486 KRT83P78385 493 aa10.19□□□□□ -0.78
SCFD1-220ENST00000556486 UBAP2LQ14157 1087 aaKnown RBP10.19□□□□□ -0.78
SCFD1-220ENST00000556486 SKIDA1Q1XH10 827 aa10.19□□□□□ -0.78
SCFD1-220ENST00000556486 ZNF284Q2VY69 593 aa10.19□□□□□ -0.78
SCFD1-220ENST00000556486 TPRG1LQ5T0D9 272 aa10.19□□□□□ -0.78
SCFD1-220ENST00000556486 ZNF783Q6ZMS7 281 aa10.19□□□□□ -0.78
SCFD1-220ENST00000556486 Q6ZSR6 202 aa10.19□□□□□ -0.78
SCFD1-220ENST00000556486 ARCQ7LC44 396 aa10.19□□□□□ -0.78
SCFD1-220ENST00000556486 BNIPLQ7Z465 357 aa10.19□□□□□ -0.78
SCFD1-220ENST00000556486 B3GNT8Q7Z7M8 397 aa10.19□□□□□ -0.78
SCFD1-220ENST00000556486 C14orf80Q86SX3 495 aa10.19□□□□□ -0.78
SCFD1-220ENST00000556486 SLITRK4Q8IW52 837 aa10.19□□□□□ -0.78
SCFD1-220ENST00000556486 FAM71AQ8IYT1 594 aa10.19□□□□□ -0.78
SCFD1-220ENST00000556486 SGF29Q96ES7 293 aa10.19□□□□□ -0.78
SCFD1-220ENST00000556486 CCDC114Q96M63 670 aa10.19□□□□□ -0.78
SCFD1-220ENST00000556486 PSMB7Q99436 277 aa10.19□□□□□ -0.78
SCFD1-220ENST00000556486 HDAC8Q9BY41 377 aa10.19□□□□□ -0.78
SCFD1-220ENST00000556486 FOXP3Q9BZS1 431 aa10.19□□□□□ -0.78
SCFD1-220ENST00000556486 TCEAL2Q9H3H9 227 aaPredicted RBP10.19□□□□□ -0.78
Retrieved 100 of 20,778 RNA–protein pairs in 18.8 ms