RNA–Protein interactions for RNA: ENST00000556433.5

ACTN1-220, Transcript of actinin alpha 1, humanhuman

TSL 3

Gene ACTN1, Length 1,259 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ACTN1-220ENST00000556433 PDFQ9HBH1 243 aa22.83■■□□□ 1.25
ACTN1-220ENST00000556433 NCKIPSDQ9NZQ3 722 aa22.83■■□□□ 1.25
ACTN1-220ENST00000556433 APOBEC3BQ9UH17 382 aaKnown RBP22.83■■□□□ 1.25
ACTN1-220ENST00000556433 ITPR1Q14643 2758 aa22.83■■□□□ 1.24
ACTN1-220ENST00000556433 TMEM191CA6NGB0 347 aa22.82■■□□□ 1.24
ACTN1-220ENST00000556433 ARHGAP42A6NI28 874 aa22.82■■□□□ 1.24
ACTN1-220ENST00000556433 EIF3CLB5ME19 914 aaKnown RBP22.82■■□□□ 1.24
ACTN1-220ENST00000556433 TOR1BO14657 336 aa22.82■■□□□ 1.24
ACTN1-220ENST00000556433 RNF8O76064 485 aa22.82■■□□□ 1.24
ACTN1-220ENST00000556433 FTLP02792 175 aaPredicted RBP22.82■■□□□ 1.24
ACTN1-220ENST00000556433 ADKP55263 362 aaKnown RBP22.82■■□□□ 1.24
ACTN1-220ENST00000556433 UGP2Q16851 508 aa22.82■■□□□ 1.24
ACTN1-220ENST00000556433 PRRT3Q5FWE3 981 aa22.82■■□□□ 1.24
ACTN1-220ENST00000556433 FAXCQ5TGI0 409 aa22.82■■□□□ 1.24
ACTN1-220ENST00000556433 PHACTR4Q8IZ21 702 aa22.82■■□□□ 1.24
ACTN1-220ENST00000556433 SNIP1Q8TAD8 396 aaKnown RBP22.82■■□□□ 1.24
ACTN1-220ENST00000556433 EIF3CQ99613 913 aaKnown RBP22.82■■□□□ 1.24
ACTN1-220ENST00000556433 SLC13A1Q9BZW2 595 aa22.82■■□□□ 1.24
ACTN1-220ENST00000556433 COQ6Q9Y2Z9 468 aa22.82■■□□□ 1.24
ACTN1-220ENST00000556433 BUB1BO60566 1050 aaPredicted RBP22.81■■□□□ 1.24
ACTN1-220ENST00000556433 CSO75390 466 aaKnown RBP22.81■■□□□ 1.24
ACTN1-220ENST00000556433 GCATO75600 419 aa22.81■■□□□ 1.24
ACTN1-220ENST00000556433 LRRC14Q15048 493 aa22.81■■□□□ 1.24
ACTN1-220ENST00000556433 CFAP58Q5T655 872 aa22.81■■□□□ 1.24
ACTN1-220ENST00000556433 GUSBP11Q6P575 273 aa22.81■■□□□ 1.24
ACTN1-220ENST00000556433 EFL1Q7Z2Z2 1120 aaKnown RBP22.81■■□□□ 1.24
ACTN1-220ENST00000556433 ZNF571Q7Z3V5 609 aaPredicted RBP22.81■■□□□ 1.24
ACTN1-220ENST00000556433 CAMK1DQ8IU85 385 aa22.81■■□□□ 1.24
ACTN1-220ENST00000556433 ZNF641Q96N77 438 aaPredicted RBP22.81■■□□□ 1.24
ACTN1-220ENST00000556433 PEBP4Q96S96 227 aa22.81■■□□□ 1.24
ACTN1-220ENST00000556433 KCTD15Q96SI1 283 aaPredicted RBP22.81■■□□□ 1.24
ACTN1-220ENST00000556433 SNRNP25Q9BV90 132 aaKnown RBP22.81■■□□□ 1.24
ACTN1-220ENST00000556433 PCDH12Q9NPG4 1184 aa22.81■■□□□ 1.24
ACTN1-220ENST00000556433 AIPL1Q9NZN9 384 aa22.81■■□□□ 1.24
ACTN1-220ENST00000556433 PNMA8BQ9ULN7 279 aaPredicted RBP22.81■■□□□ 1.24
ACTN1-220ENST00000556433 TSPAN11A1L157 253 aa22.8■■□□□ 1.24
ACTN1-220ENST00000556433 GZMAP12544 262 aa22.8■■□□□ 1.24
ACTN1-220ENST00000556433 ERCC2P18074 760 aa22.8■■□□□ 1.24
ACTN1-220ENST00000556433 MIPP30301 263 aa22.8■■□□□ 1.24
ACTN1-220ENST00000556433 PPARDQ03181 441 aa22.8■■□□□ 1.24
ACTN1-220ENST00000556433 IRF4Q15306 451 aa22.8■■□□□ 1.24
ACTN1-220ENST00000556433 NR0B2Q15466 257 aa22.8■■□□□ 1.24
ACTN1-220ENST00000556433 WSCD2Q2TBF2 565 aa22.8■■□□□ 1.24
ACTN1-220ENST00000556433 TBC1D25Q3MII6 688 aa22.8■■□□□ 1.24
ACTN1-220ENST00000556433 ERAP2Q6P179 960 aa22.8■■□□□ 1.24
ACTN1-220ENST00000556433 MACC1Q6ZN28 852 aa22.8■■□□□ 1.24
ACTN1-220ENST00000556433 RFX8Q6ZV50 586 aa22.8■■□□□ 1.24
ACTN1-220ENST00000556433 SRLQ86TD4 932 aa22.8■■□□□ 1.24
ACTN1-220ENST00000556433 GLMNQ92990 594 aa22.8■■□□□ 1.24
ACTN1-220ENST00000556433 TRIM7Q9C029 511 aa22.8■■□□□ 1.24
ACTN1-220ENST00000556433 CNOT8Q9UFF9 292 aaKnown RBP22.8■■□□□ 1.24
ACTN1-220ENST00000556433 NBEAQ8NFP9 2946 aa22.8■■□□□ 1.24
ACTN1-220ENST00000556433 EME2A4GXA9 379 aaPredicted RBP22.79■■□□□ 1.24
ACTN1-220ENST00000556433 RIOK3O14730 519 aaKnown RBP22.79■■□□□ 1.24
ACTN1-220ENST00000556433 PRPSAP2O60256 369 aa22.79■■□□□ 1.24
ACTN1-220ENST00000556433 USP12O75317 370 aa22.79■■□□□ 1.24
ACTN1-220ENST00000556433 PALMO75781 387 aa22.79■■□□□ 1.24
ACTN1-220ENST00000556433 MPOP05164 745 aa22.79■■□□□ 1.24
ACTN1-220ENST00000556433 ANXA6P08133 673 aa22.79■■□□□ 1.24
ACTN1-220ENST00000556433 C6P13671 934 aa22.79■■□□□ 1.24
ACTN1-220ENST00000556433 RGRP47804 291 aa22.79■■□□□ 1.24
ACTN1-220ENST00000556433 RPIAP49247 311 aa22.79■■□□□ 1.24
ACTN1-220ENST00000556433 PEX5P50542 639 aa22.79■■□□□ 1.24
ACTN1-220ENST00000556433 PPP6R3Q5H9R7 873 aaPredicted RBP22.79■■□□□ 1.24
ACTN1-220ENST00000556433 BRAT1Q6PJG6 821 aa22.79■■□□□ 1.24
ACTN1-220ENST00000556433 TSEN2Q8NCE0 465 aaKnown RBP22.79■■□□□ 1.24
ACTN1-220ENST00000556433 TBATAQ96M53 351 aa22.79■■□□□ 1.24
ACTN1-220ENST00000556433 NAP1L5Q96NT1 182 aaPredicted RBP22.79■■□□□ 1.24
ACTN1-220ENST00000556433 TUBGCP5Q96RT8 1024 aa22.79■■□□□ 1.24
ACTN1-220ENST00000556433 LRRC61Q9BV99 259 aa22.79■■□□□ 1.24
ACTN1-220ENST00000556433 A0A1W2PQC6 194 aa22.78■■□□□ 1.24
ACTN1-220ENST00000556433 TMEM110-MUSTN1A8MSY1 372 aa22.78■■□□□ 1.24
ACTN1-220ENST00000556433 LMO7DNF2Z398 122 aa22.78■■□□□ 1.24
ACTN1-220ENST00000556433 DFFAO00273 331 aa22.78■■□□□ 1.24
ACTN1-220ENST00000556433 DDX3XO00571 662 aaKnown RBP eCLIP22.78■■□□□ 1.24
ACTN1-220ENST00000556433 MUSKO15146 869 aa22.78■■□□□ 1.24
ACTN1-220ENST00000556433 YY2O15391 372 aa22.78■■□□□ 1.24
ACTN1-220ENST00000556433 LZTS3O60299 673 aaPredicted RBP22.78■■□□□ 1.24
ACTN1-220ENST00000556433 PRKCGP05129 697 aa22.78■■□□□ 1.24
ACTN1-220ENST00000556433 TSHRP16473 764 aa22.78■■□□□ 1.24
ACTN1-220ENST00000556433 TGM2P21980 687 aa22.78■■□□□ 1.24
ACTN1-220ENST00000556433 PRKCIP41743 596 aa22.78■■□□□ 1.24
ACTN1-220ENST00000556433 CSNK1DP48730 415 aa22.78■■□□□ 1.24
ACTN1-220ENST00000556433 LIG3P49916 1009 aa22.78■■□□□ 1.24
ACTN1-220ENST00000556433 KLHL30Q0D2K2 578 aa22.78■■□□□ 1.24
ACTN1-220ENST00000556433 CCDC173Q0VFZ6 552 aa22.78■■□□□ 1.24
ACTN1-220ENST00000556433 AFMIDQ63HM1 303 aa22.78■■□□□ 1.24
ACTN1-220ENST00000556433 E4F1Q66K89 784 aaPredicted RBP22.78■■□□□ 1.24
ACTN1-220ENST00000556433 ARHGAP12Q8IWW6 846 aa22.78■■□□□ 1.24
ACTN1-220ENST00000556433 FNIP1Q8TF40 1166 aa22.78■■□□□ 1.24
ACTN1-220ENST00000556433 ZNF653Q96CK0 615 aa22.78■■□□□ 1.24
ACTN1-220ENST00000556433 BBC3Q96PG8 261 aaPredicted RBP22.78■■□□□ 1.24
ACTN1-220ENST00000556433 BOCQ9BWV1 1114 aa22.78■■□□□ 1.24
ACTN1-220ENST00000556433 CLPBQ9H078 707 aa22.78■■□□□ 1.24
ACTN1-220ENST00000556433 ATP13A3Q9H7F0 1226 aa22.78■■□□□ 1.24
ACTN1-220ENST00000556433 SP110Q9HB58 689 aa22.78■■□□□ 1.24
ACTN1-220ENST00000556433 ATP8A1Q9Y2Q0 1164 aa22.78■■□□□ 1.24
ACTN1-220ENST00000556433 RAI2Q9Y5P3 530 aa22.78■■□□□ 1.24
ACTN1-220ENST00000556433 SKILP12757 684 aa22.77■■□□□ 1.24
ACTN1-220ENST00000556433 SERPINA4P29622 427 aa22.77■■□□□ 1.24
Retrieved 100 of 20,778 RNA–protein pairs in 23 ms