RNA–Protein interactions for RNA: ENST00000556422.5

TMEM260-210, Transcript of transmembrane protein 260, humanhuman

TSL 1 (best)

Gene TMEM260, Length 3,864 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TMEM260-210ENST00000556422 SMPD2O60906 423 aa5.15□□□□□ -1.59
TMEM260-210ENST00000556422 HUS1O60921 280 aa5.15□□□□□ -1.59
TMEM260-210ENST00000556422 ADAMTS4O75173 837 aa5.15□□□□□ -1.59
TMEM260-210ENST00000556422 POP4O95707 220 aaKnown RBP5.15□□□□□ -1.59
TMEM260-210ENST00000556422 RETP07949 1114 aa5.15□□□□□ -1.59
TMEM260-210ENST00000556422 KRT16P08779 473 aa5.15□□□□□ -1.59
TMEM260-210ENST00000556422 CLUP10909 449 aa5.15□□□□□ -1.59
TMEM260-210ENST00000556422 NPR3P17342 541 aa5.15□□□□□ -1.59
TMEM260-210ENST00000556422 FOXN2P32314 431 aa5.15□□□□□ -1.59
TMEM260-210ENST00000556422 SOX6P35712 828 aa5.15□□□□□ -1.59
TMEM260-210ENST00000556422 MATKP42679 507 aa5.15□□□□□ -1.59
TMEM260-210ENST00000556422 MAGEA3P43357 314 aa5.15□□□□□ -1.59
TMEM260-210ENST00000556422 MAGEA6P43360 314 aa5.15□□□□□ -1.59
TMEM260-210ENST00000556422 PTPN5P54829 565 aa5.15□□□□□ -1.59
TMEM260-210ENST00000556422 ARL4CP56559 192 aa5.15□□□□□ -1.59
TMEM260-210ENST00000556422 BCAR1P56945 870 aa5.15□□□□□ -1.59
TMEM260-210ENST00000556422 HTRA3P83110 453 aa5.15□□□□□ -1.59
TMEM260-210ENST00000556422 SF3A3Q12874 501 aaKnown RBP eCLIP5.15□□□□□ -1.59
TMEM260-210ENST00000556422 KRT81Q14533 505 aa5.15□□□□□ -1.59
TMEM260-210ENST00000556422 KCTD21Q4G0X4 260 aa5.15□□□□□ -1.59
TMEM260-210ENST00000556422 FNDC1Q4ZHG4 1894 aaPredicted RBP5.15□□□□□ -1.59
TMEM260-210ENST00000556422 GNASQ5JWF2 1037 aa5.15□□□□□ -1.59
TMEM260-210ENST00000556422 COL13A1Q5TAT6 717 aaPredicted RBP5.15□□□□□ -1.59
TMEM260-210ENST00000556422 FAXCQ5TGI0 409 aa5.15□□□□□ -1.59
TMEM260-210ENST00000556422 DARS2Q6PI48 645 aaKnown RBP5.15□□□□□ -1.59
TMEM260-210ENST00000556422 ZNF852Q6ZMS4 543 aa5.15□□□□□ -1.59
TMEM260-210ENST00000556422 HFE2Q6ZVN8 426 aa5.15□□□□□ -1.59
TMEM260-210ENST00000556422 STRADAQ7RTN6 431 aa5.15□□□□□ -1.59
TMEM260-210ENST00000556422 GPRIN1Q7Z2K8 1008 aa5.15□□□□□ -1.59
TMEM260-210ENST00000556422 CTU1Q7Z7A3 348 aaKnown RBP5.15□□□□□ -1.59
TMEM260-210ENST00000556422 EPHX4Q8IUS5 362 aa5.15□□□□□ -1.59
TMEM260-210ENST00000556422 SLC38A6Q8IZM9 456 aa5.15□□□□□ -1.59
TMEM260-210ENST00000556422 CACNA2D3Q8IZS8 1091 aa5.15□□□□□ -1.59
TMEM260-210ENST00000556422 NUP93Q8N1F7 819 aa5.15□□□□□ -1.59
TMEM260-210ENST00000556422 ANKS4BQ8N8V4 417 aa5.15□□□□□ -1.59
TMEM260-210ENST00000556422 FBF1Q8TES7 1133 aa5.15□□□□□ -1.59
TMEM260-210ENST00000556422 DCAKDQ8WVC6 231 aa5.15□□□□□ -1.59
TMEM260-210ENST00000556422 TRMT2BQ96GJ1 504 aaKnown RBP5.15□□□□□ -1.59
TMEM260-210ENST00000556422 VPS39Q96JC1 886 aa5.15□□□□□ -1.59
TMEM260-210ENST00000556422 ART5Q96L15 291 aa5.15□□□□□ -1.59
TMEM260-210ENST00000556422 RPRD1AQ96P16 312 aaPredicted RBP5.15□□□□□ -1.59
TMEM260-210ENST00000556422 GAD1Q99259 594 aa5.15□□□□□ -1.59
TMEM260-210ENST00000556422 UPF3AQ9H1J1 476 aaKnown RBP5.15□□□□□ -1.59
TMEM260-210ENST00000556422 FGFR1OP2Q9NVK5 253 aa5.15□□□□□ -1.59
TMEM260-210ENST00000556422 DTLQ9NZJ0 730 aa5.15□□□□□ -1.59
TMEM260-210ENST00000556422 FETUBQ9UGM5 382 aa5.15□□□□□ -1.59
TMEM260-210ENST00000556422 BAG5Q9UL15 447 aa5.15□□□□□ -1.59
TMEM260-210ENST00000556422 AP4E1Q9UPM8 1137 aa5.15□□□□□ -1.59
TMEM260-210ENST00000556422 MYLKQ15746 1914 aa5.15□□□□□ -1.59
TMEM260-210ENST00000556422 TCRBV9S1A1TA0A576 114 aa5.14□□□□□ -1.59
TMEM260-210ENST00000556422 ANKRD34BA5PLL1 514 aa5.14□□□□□ -1.59
TMEM260-210ENST00000556422 ARL5CA6NH57 179 aa5.14□□□□□ -1.59
TMEM260-210ENST00000556422 TCP11X1B4DZS4 312 aa5.14□□□□□ -1.59
TMEM260-210ENST00000556422 CYB561D2O14569 222 aa5.14□□□□□ -1.59
TMEM260-210ENST00000556422 CHADO15335 359 aa5.14□□□□□ -1.59
TMEM260-210ENST00000556422 PRPF4O43172 522 aaKnown RBP eCLIP5.14□□□□□ -1.59
TMEM260-210ENST00000556422 SPAG7O75391 227 aa5.14□□□□□ -1.59
TMEM260-210ENST00000556422 RASSF9O75901 435 aa5.14□□□□□ -1.59
TMEM260-210ENST00000556422 METTL18O95568 372 aa5.14□□□□□ -1.59
TMEM260-210ENST00000556422 ECDO95905 644 aaPredicted RBP5.14□□□□□ -1.59
TMEM260-210ENST00000556422 EIF2S1P05198 315 aaKnown RBP5.14□□□□□ -1.59
TMEM260-210ENST00000556422 CTSHP09668 335 aa5.14□□□□□ -1.59
TMEM260-210ENST00000556422 GOT1P17174 413 aa5.14□□□□□ -1.59
TMEM260-210ENST00000556422 HTR2BP41595 481 aa5.14□□□□□ -1.59
TMEM260-210ENST00000556422 ELK3P41970 407 aa5.14□□□□□ -1.59
TMEM260-210ENST00000556422 KCNJ5P48544 419 aa5.14□□□□□ -1.59
TMEM260-210ENST00000556422 YWHAZP63104 245 aaKnown RBP5.14□□□□□ -1.59
TMEM260-210ENST00000556422 NKX3-2P78367 333 aa5.14□□□□□ -1.59
TMEM260-210ENST00000556422 COG7P83436 770 aa5.14□□□□□ -1.59
TMEM260-210ENST00000556422 DOC2AQ14183 400 aa5.14□□□□□ -1.59
TMEM260-210ENST00000556422 SLC25A52Q3SY17 297 aa5.14□□□□□ -1.59
TMEM260-210ENST00000556422 SYPL2Q5VXT5 272 aa5.14□□□□□ -1.59
TMEM260-210ENST00000556422 MZT2BQ6NZ67 158 aa5.14□□□□□ -1.59
TMEM260-210ENST00000556422 PGM2L1Q6PCE3 622 aa5.14□□□□□ -1.59
TMEM260-210ENST00000556422 AAGABQ6PD74 315 aa5.14□□□□□ -1.59
TMEM260-210ENST00000556422 ADGRD1Q6QNK2 874 aa5.14□□□□□ -1.59
TMEM260-210ENST00000556422 TRIM67Q6ZTA4 783 aa5.14□□□□□ -1.59
TMEM260-210ENST00000556422 C3orf62Q6ZUJ4 267 aa5.14□□□□□ -1.59
TMEM260-210ENST00000556422 BHLHA9Q7RTU4 235 aa5.14□□□□□ -1.59
TMEM260-210ENST00000556422 SPATA24Q86W54 205 aa5.14□□□□□ -1.59
TMEM260-210ENST00000556422 FAM131BQ86XD5 332 aa5.14□□□□□ -1.59
TMEM260-210ENST00000556422 DEFB106AQ8N104 65 aa5.14□□□□□ -1.59
TMEM260-210ENST00000556422 C4orf33Q8N1A6 199 aa5.14□□□□□ -1.59
TMEM260-210ENST00000556422 ZNF276Q8N554 614 aa5.14□□□□□ -1.59
TMEM260-210ENST00000556422 TBC1D19Q8N5T2 526 aa5.14□□□□□ -1.59
TMEM260-210ENST00000556422 ANKLE1Q8NAG6 615 aa5.14□□□□□ -1.59
TMEM260-210ENST00000556422 PYROXD1Q8WU10 500 aa5.14□□□□□ -1.59
TMEM260-210ENST00000556422 TRIM43Q96BQ3 446 aaPredicted RBP5.14□□□□□ -1.59
TMEM260-210ENST00000556422 METTL2AQ96IZ6 378 aaKnown RBP5.14□□□□□ -1.59
TMEM260-210ENST00000556422 CEP19Q96LK0 163 aa5.14□□□□□ -1.59
TMEM260-210ENST00000556422 PAFAH2Q99487 392 aa5.14□□□□□ -1.59
TMEM260-210ENST00000556422 ZPBPQ9BS86 351 aa5.14□□□□□ -1.59
TMEM260-210ENST00000556422 PITHD1Q9GZP4 211 aaPredicted RBP5.14□□□□□ -1.59
TMEM260-210ENST00000556422 OLA1Q9NTK5 396 aaKnown RBP5.14□□□□□ -1.59
TMEM260-210ENST00000556422 SLC24A2Q9UI40 661 aa5.14□□□□□ -1.59
TMEM260-210ENST00000556422 ZC3H11BA0A1B0GUI2 810 aaPredicted RBP5.14□□□□□ -1.59
TMEM260-210ENST00000556422 FAM47DPA6NHR8 397 aa5.14□□□□□ -1.59
TMEM260-210ENST00000556422 KBTBD13C9JR72 458 aa5.14□□□□□ -1.59
TMEM260-210ENST00000556422 J3KRW8 73 aa5.14□□□□□ -1.59
TMEM260-210ENST00000556422 NRP1O14786 923 aa5.14□□□□□ -1.59
Retrieved 100 of 20,778 RNA–protein pairs in 36.2 ms