RNA–Protein interactions for RNA: ENST00000556375.5

SLIRP-206, Transcript of SRA stem-loop interacting RNA binding protein, humanhuman

TSL 2

Gene SLIRP, Length 408 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SLIRP-206ENST00000556375 C1QTNF2Q9BXJ5 285 aa11.64□□□□□ -0.55
SLIRP-206ENST00000556375 DDX56Q9NY93 547 aaKnown RBP11.64□□□□□ -0.55
SLIRP-206ENST00000556375 CA5BQ9Y2D0 317 aa11.64□□□□□ -0.55
SLIRP-206ENST00000556375 EPN1Q9Y6I3 576 aaPredicted RBP11.64□□□□□ -0.55
SLIRP-206ENST00000556375 CHD8Q9HCK8 2581 aa11.63□□□□□ -0.55
SLIRP-206ENST00000556375 LOC107983988A0A1B0GUW6 1196 aaPredicted RBP11.63□□□□□ -0.55
SLIRP-206ENST00000556375 IGLON5A6NGN9 336 aa11.63□□□□□ -0.55
SLIRP-206ENST00000556375 A6NNZ2 444 aa11.63□□□□□ -0.55
SLIRP-206ENST00000556375 KCNK3O14649 394 aa11.63□□□□□ -0.55
SLIRP-206ENST00000556375 CBFA2T3O75081 653 aa11.63□□□□□ -0.55
SLIRP-206ENST00000556375 SOCS5O75159 536 aa11.63□□□□□ -0.55
SLIRP-206ENST00000556375 THEGLP0DJG4 465 aa11.63□□□□□ -0.55
SLIRP-206ENST00000556375 EPHA8P29322 1005 aaPredicted RBP11.63□□□□□ -0.55
SLIRP-206ENST00000556375 MMP12P39900 470 aa11.63□□□□□ -0.55
SLIRP-206ENST00000556375 ARRB1P49407 418 aaPredicted RBP11.63□□□□□ -0.55
SLIRP-206ENST00000556375 SGCGQ13326 291 aa11.63□□□□□ -0.55
SLIRP-206ENST00000556375 IFI16Q16666 785 aaKnown RBP11.63□□□□□ -0.55
SLIRP-206ENST00000556375 UGP2Q16851 508 aa11.63□□□□□ -0.55
SLIRP-206ENST00000556375 INAVAQ3KP66 663 aa11.63□□□□□ -0.55
SLIRP-206ENST00000556375 TMEM52BQ4KMG9 183 aa11.63□□□□□ -0.55
SLIRP-206ENST00000556375 N4BP2L1Q5TBK1 243 aaPredicted RBP11.63□□□□□ -0.55
SLIRP-206ENST00000556375 SLC9A4Q6AI14 798 aa11.63□□□□□ -0.55
SLIRP-206ENST00000556375 ERAP2Q6P179 960 aa11.63□□□□□ -0.55
SLIRP-206ENST00000556375 RAD9BQ6WBX8 426 aa11.63□□□□□ -0.55
SLIRP-206ENST00000556375 DBX2Q6ZNG2 339 aa11.63□□□□□ -0.55
SLIRP-206ENST00000556375 ZSWIM9Q86XI8 627 aa11.63□□□□□ -0.55
SLIRP-206ENST00000556375 SPATS2Q86XZ4 545 aaKnown RBP11.63□□□□□ -0.55
SLIRP-206ENST00000556375 PGBD5Q8N414 524 aa11.63□□□□□ -0.55
SLIRP-206ENST00000556375 TEX26Q8N6G2 289 aa11.63□□□□□ -0.55
SLIRP-206ENST00000556375 PLD5Q8N7P1 536 aa11.63□□□□□ -0.55
SLIRP-206ENST00000556375 OR13H1Q8NG92 308 aa11.63□□□□□ -0.55
SLIRP-206ENST00000556375 TRAF3IP1Q8TDR0 691 aaPredicted RBP11.63□□□□□ -0.55
SLIRP-206ENST00000556375 CXorf40AQ8TE69 158 aa11.63□□□□□ -0.55
SLIRP-206ENST00000556375 MAML1Q92585 1016 aa11.63□□□□□ -0.55
SLIRP-206ENST00000556375 HDAC11Q96DB2 347 aa11.63□□□□□ -0.55
SLIRP-206ENST00000556375 KLHDC7BQ96G42 594 aa11.63□□□□□ -0.55
SLIRP-206ENST00000556375 CALR3Q96L12 384 aaKnown RBP11.63□□□□□ -0.55
SLIRP-206ENST00000556375 ZNF830Q96NB3 372 aaPredicted RBP11.63□□□□□ -0.55
SLIRP-206ENST00000556375 TSGA13Q96PP4 275 aa11.63□□□□□ -0.55
SLIRP-206ENST00000556375 LENG8Q96PV6 779 aaPredicted RBP11.63□□□□□ -0.55
SLIRP-206ENST00000556375 BAG1Q99933 345 aaPredicted RBP11.63□□□□□ -0.55
SLIRP-206ENST00000556375 C1QTNF7Q9BXJ2 289 aa11.63□□□□□ -0.55
SLIRP-206ENST00000556375 PCDH12Q9NPG4 1184 aa11.63□□□□□ -0.55
SLIRP-206ENST00000556375 GPR27Q9NS67 375 aa11.63□□□□□ -0.55
SLIRP-206ENST00000556375 DTLQ9NZJ0 730 aa11.63□□□□□ -0.55
SLIRP-206ENST00000556375 PCOLCE2Q9UKZ9 415 aa11.63□□□□□ -0.55
SLIRP-206ENST00000556375 TFR2Q9UP52 801 aa11.63□□□□□ -0.55
SLIRP-206ENST00000556375 ATP8A1Q9Y2Q0 1164 aa11.63□□□□□ -0.55
SLIRP-206ENST00000556375 HYOU1Q9Y4L1 999 aa11.63□□□□□ -0.55
SLIRP-206ENST00000556375 HS3ST3A1Q9Y663 406 aa11.63□□□□□ -0.55
SLIRP-206ENST00000556375 A0A1W2PQ67 120 aa11.62□□□□□ -0.55
SLIRP-206ENST00000556375 BTNL10A8MVZ5 291 aa11.62□□□□□ -0.55
SLIRP-206ENST00000556375 GOLGA6L6A8MZA4 724 aa11.62□□□□□ -0.55
SLIRP-206ENST00000556375 TRAFD1O14545 582 aaPredicted RBP11.62□□□□□ -0.55
SLIRP-206ENST00000556375 RIOK3O14730 519 aaKnown RBP11.62□□□□□ -0.55
SLIRP-206ENST00000556375 APOL1O14791 398 aa11.62□□□□□ -0.55
SLIRP-206ENST00000556375 MATN3O15232 486 aa11.62□□□□□ -0.55
SLIRP-206ENST00000556375 RAD51BO15315 384 aa11.62□□□□□ -0.55
SLIRP-206ENST00000556375 HTRA2O43464 458 aaPredicted RBP11.62□□□□□ -0.55
SLIRP-206ENST00000556375 TM7SF2O76062 418 aa11.62□□□□□ -0.55
SLIRP-206ENST00000556375 MAP3K6O95382 1288 aa11.62□□□□□ -0.55
SLIRP-206ENST00000556375 PAK4O96013 591 aaPredicted RBP11.62□□□□□ -0.55
SLIRP-206ENST00000556375 CCNCP24863 283 aa11.62□□□□□ -0.55
SLIRP-206ENST00000556375 PMLP29590 882 aa11.62□□□□□ -0.55
SLIRP-206ENST00000556375 GRK6P43250 576 aa11.62□□□□□ -0.55
SLIRP-206ENST00000556375 RXRGP48443 463 aa11.62□□□□□ -0.55
SLIRP-206ENST00000556375 CLDN2P57739 230 aa11.62□□□□□ -0.55
SLIRP-206ENST00000556375 MAXP61244 160 aa11.62□□□□□ -0.55
SLIRP-206ENST00000556375 SIM1P81133 766 aaPredicted RBP11.62□□□□□ -0.55
SLIRP-206ENST00000556375 IL9RQ01113 521 aa11.62□□□□□ -0.55
SLIRP-206ENST00000556375 SHBQ15464 509 aa11.62□□□□□ -0.55
SLIRP-206ENST00000556375 ODF2Q5BJF6 829 aa11.62□□□□□ -0.55
SLIRP-206ENST00000556375 ALG1LQ6GMV1 187 aa11.62□□□□□ -0.55
SLIRP-206ENST00000556375 PTAR1Q7Z6K3 402 aaPredicted RBP11.62□□□□□ -0.55
SLIRP-206ENST00000556375 DCP2Q8IU60 420 aaKnown RBP11.62□□□□□ -0.55
SLIRP-206ENST00000556375 TMEM139Q8IV31 216 aa11.62□□□□□ -0.55
SLIRP-206ENST00000556375 PAF1Q8N7H5 531 aa11.62□□□□□ -0.55
SLIRP-206ENST00000556375 BAHD1Q8TBE0 780 aaPredicted RBP11.62□□□□□ -0.55
SLIRP-206ENST00000556375 SETD7Q8WTS6 366 aaKnown RBP11.62□□□□□ -0.55
SLIRP-206ENST00000556375 NSMCE3Q96MG7 304 aa11.62□□□□□ -0.55
SLIRP-206ENST00000556375 CAMK1GQ96NX5 476 aa11.62□□□□□ -0.55
SLIRP-206ENST00000556375 KLF6Q99612 283 aaPredicted RBP11.62□□□□□ -0.55
SLIRP-206ENST00000556375 WRAP53Q9BUR4 548 aaKnown RBP11.62□□□□□ -0.55
SLIRP-206ENST00000556375 GOLPH3Q9H4A6 298 aa11.62□□□□□ -0.55
SLIRP-206ENST00000556375 NT5MQ9NPB1 228 aa11.62□□□□□ -0.55
SLIRP-206ENST00000556375 SCUBE2Q9NQ36 999 aa11.62□□□□□ -0.55
SLIRP-206ENST00000556375 HAUS2Q9NVX0 235 aa11.62□□□□□ -0.55
SLIRP-206ENST00000556375 AMACRQ9UHK6 382 aa11.62□□□□□ -0.55
SLIRP-206ENST00000556375 REXO2Q9Y3B8 237 aaKnown RBP11.62□□□□□ -0.55
SLIRP-206ENST00000556375 ALG6Q9Y672 507 aa11.62□□□□□ -0.55
SLIRP-206ENST00000556375 TDRD6O60522 2096 aaKnown RBP11.61□□□□□ -0.55
SLIRP-206ENST00000556375 SPAARA0A1B0GVQ0 90 aa11.61□□□□□ -0.55
SLIRP-206ENST00000556375 CFAP69A5D8W1 941 aa11.61□□□□□ -0.55
SLIRP-206ENST00000556375 RCCD1A6NED2 376 aa11.61□□□□□ -0.55
SLIRP-206ENST00000556375 POM121BA6NF01 834 aa11.61□□□□□ -0.55
SLIRP-206ENST00000556375 FPGTO14772 594 aa11.61□□□□□ -0.55
SLIRP-206ENST00000556375 MMP20O60882 483 aa11.61□□□□□ -0.55
SLIRP-206ENST00000556375 CPP00450 1065 aa11.61□□□□□ -0.55
SLIRP-206ENST00000556375 C6P13671 934 aa11.61□□□□□ -0.55
SLIRP-206ENST00000556375 TNNT1P13805 278 aa11.61□□□□□ -0.55
Retrieved 100 of 20,778 RNA–protein pairs in 23 ms