RNA–Protein interactions for RNA: ENST00000556339.5

ATXN3-240, Transcript of ataxin 3, humanhuman

TSL 1 (best)

Gene ATXN3, Length 525 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATXN3-240ENST00000556339 KCNB1Q14721 858 aa4.16□□□□□ -1.74
ATXN3-240ENST00000556339 VEPH1Q14D04 833 aa4.16□□□□□ -1.74
ATXN3-240ENST00000556339 TCEA2Q15560 299 aa4.16□□□□□ -1.74
ATXN3-240ENST00000556339 TEAD2Q15562 447 aa4.16□□□□□ -1.74
ATXN3-240ENST00000556339 IL17AQ16552 155 aa4.16□□□□□ -1.74
ATXN3-240ENST00000556339 C21orf62-AS1Q17RA5 79 aa4.16□□□□□ -1.74
ATXN3-240ENST00000556339 MGAT5BQ3V5L5 792 aa4.16□□□□□ -1.74
ATXN3-240ENST00000556339 MAP9Q49MG5 647 aa4.16□□□□□ -1.74
ATXN3-240ENST00000556339 COBLL1Q53SF7 1204 aa4.16□□□□□ -1.74
ATXN3-240ENST00000556339 FAM78AQ5JUQ0 283 aa4.16□□□□□ -1.74
ATXN3-240ENST00000556339 FAM102AQ5T9C2 384 aaPredicted RBP4.16□□□□□ -1.74
ATXN3-240ENST00000556339 KCNK18Q7Z418 384 aa4.16□□□□□ -1.74
ATXN3-240ENST00000556339 HAUS6Q7Z4H7 955 aa4.16□□□□□ -1.74
ATXN3-240ENST00000556339 ITIH5Q86UX2 942 aa4.16□□□□□ -1.74
ATXN3-240ENST00000556339 LRRTM3Q86VH5 581 aa4.16□□□□□ -1.74
ATXN3-240ENST00000556339 TCEAL8Q8IYN2 117 aa4.16□□□□□ -1.74
ATXN3-240ENST00000556339 SYCP3Q8IZU3 236 aa4.16□□□□□ -1.74
ATXN3-240ENST00000556339 SYNPOQ8N3V7 929 aa4.16□□□□□ -1.74
ATXN3-240ENST00000556339 DCLK2Q8N568 766 aa4.16□□□□□ -1.74
ATXN3-240ENST00000556339 SYT2Q8N9I0 419 aaPredicted RBP4.16□□□□□ -1.74
ATXN3-240ENST00000556339 LEMD2Q8NC56 503 aa4.16□□□□□ -1.74
ATXN3-240ENST00000556339 MSANTD4Q8NCY6 345 aa4.16□□□□□ -1.74
ATXN3-240ENST00000556339 TMEM161BQ8NDZ6 487 aa4.16□□□□□ -1.74
ATXN3-240ENST00000556339 OR56A1Q8NGH5 318 aa4.16□□□□□ -1.74
ATXN3-240ENST00000556339 TTC8Q8TAM2 541 aa4.16□□□□□ -1.74
ATXN3-240ENST00000556339 SNX33Q8WV41 574 aa4.16□□□□□ -1.74
ATXN3-240ENST00000556339 FAM3CQ92520 227 aa4.16□□□□□ -1.74
ATXN3-240ENST00000556339 SMARCD2Q92925 531 aa4.16□□□□□ -1.74
ATXN3-240ENST00000556339 CCDC47Q96A33 483 aaKnown RBP4.16□□□□□ -1.74
ATXN3-240ENST00000556339 ELSPBP1Q96BH3 223 aa4.16□□□□□ -1.74
ATXN3-240ENST00000556339 PAGE5Q96GU1 130 aa4.16□□□□□ -1.74
ATXN3-240ENST00000556339 AK8Q96MA6 479 aa4.16□□□□□ -1.74
ATXN3-240ENST00000556339 Q96MF0 132 aa4.16□□□□□ -1.74
ATXN3-240ENST00000556339 ZMAT2Q96NC0 199 aaKnown RBP4.16□□□□□ -1.74
ATXN3-240ENST00000556339 PGLYRP2Q96PD5 576 aa4.16□□□□□ -1.74
ATXN3-240ENST00000556339 GCNAQ96QF7 691 aa4.16□□□□□ -1.74
ATXN3-240ENST00000556339 NTPCRQ9BSD7 190 aaKnown RBP4.16□□□□□ -1.74
ATXN3-240ENST00000556339 ALOXE3Q9BYJ1 711 aa4.16□□□□□ -1.74
ATXN3-240ENST00000556339 MS4A5Q9H3V2 200 aa4.16□□□□□ -1.74
ATXN3-240ENST00000556339 HAUS4Q9H6D7 363 aa4.16□□□□□ -1.74
ATXN3-240ENST00000556339 VIPAS39Q9H9C1 493 aa4.16□□□□□ -1.74
ATXN3-240ENST00000556339 LTB4R2Q9NPC1 389 aa4.16□□□□□ -1.74
ATXN3-240ENST00000556339 MED4Q9NPJ6 270 aa4.16□□□□□ -1.74
ATXN3-240ENST00000556339 CASS4Q9NQ75 786 aa4.16□□□□□ -1.74
ATXN3-240ENST00000556339 TBCCD1Q9NVR7 557 aa4.16□□□□□ -1.74
ATXN3-240ENST00000556339 ZSCAN32Q9NX65 697 aa4.16□□□□□ -1.74
ATXN3-240ENST00000556339 DKK2Q9UBU2 259 aa4.16□□□□□ -1.74
ATXN3-240ENST00000556339 GMEB2Q9UKD1 530 aa4.16□□□□□ -1.74
ATXN3-240ENST00000556339 FBXO4Q9UKT5 387 aa4.16□□□□□ -1.74
ATXN3-240ENST00000556339 MAFFQ9ULX9 164 aa4.16□□□□□ -1.74
ATXN3-240ENST00000556339 UBQLN1Q9UMX0 589 aaKnown RBP4.16□□□□□ -1.74
ATXN3-240ENST00000556339 CACNA1BQ00975 2339 aa4.16□□□□□ -1.74
ATXN3-240ENST00000556339 OTOGLQ3ZCN5 2332 aa4.16□□□□□ -1.74
ATXN3-240ENST00000556339 MYH10P35580 1976 aa4.15□□□□□ -1.74
ATXN3-240ENST00000556339 ANO9A1A5B4 782 aa4.15□□□□□ -1.75
ATXN3-240ENST00000556339 TARSL2A2RTX5 802 aaKnown RBP4.15□□□□□ -1.75
ATXN3-240ENST00000556339 HEPACAM2A8MVW5 462 aa4.15□□□□□ -1.75
ATXN3-240ENST00000556339 CYB561D2O14569 222 aa4.15□□□□□ -1.75
ATXN3-240ENST00000556339 OGTO15294 1046 aa4.15□□□□□ -1.75
ATXN3-240ENST00000556339 FGFR1OPO95684 399 aaKnown RBP4.15□□□□□ -1.75
ATXN3-240ENST00000556339 CFIP05156 583 aa4.15□□□□□ -1.75
ATXN3-240ENST00000556339 POU2F2P09086 479 aa4.15□□□□□ -1.75
ATXN3-240ENST00000556339 OR4Q2P0C623 313 aa4.15□□□□□ -1.75
ATXN3-240ENST00000556339 ODC1P11926 461 aa4.15□□□□□ -1.75
ATXN3-240ENST00000556339 IDEP14735 1019 aa4.15□□□□□ -1.75
ATXN3-240ENST00000556339 GLULP15104 373 aa4.15□□□□□ -1.75
ATXN3-240ENST00000556339 PRLRP16471 622 aa4.15□□□□□ -1.75
ATXN3-240ENST00000556339 PSMC3P17980 439 aa4.15□□□□□ -1.75
ATXN3-240ENST00000556339 CYP3A5P20815 502 aa4.15□□□□□ -1.75
ATXN3-240ENST00000556339 PAX3P23760 479 aa4.15□□□□□ -1.75
ATXN3-240ENST00000556339 CCNE1P24864 410 aa4.15□□□□□ -1.75
ATXN3-240ENST00000556339 NMT1P30419 496 aaKnown RBP4.15□□□□□ -1.75
ATXN3-240ENST00000556339 ABCD1P33897 745 aa4.15□□□□□ -1.75
ATXN3-240ENST00000556339 TNFSF9P41273 254 aa4.15□□□□□ -1.75
ATXN3-240ENST00000556339 CXCL12P48061 93 aa4.15□□□□□ -1.75
ATXN3-240ENST00000556339 TUFMP49411 452 aaKnown RBP4.15□□□□□ -1.75
ATXN3-240ENST00000556339 ACOT2P49753 483 aa4.15□□□□□ -1.75
ATXN3-240ENST00000556339 GUCY2FP51841 1108 aa4.15□□□□□ -1.75
ATXN3-240ENST00000556339 SLC12A3P55017 1021 aa4.15□□□□□ -1.75
ATXN3-240ENST00000556339 CLRN1P58418 232 aa4.15□□□□□ -1.75
ATXN3-240ENST00000556339 AMPD3Q01432 767 aa4.15□□□□□ -1.75
ATXN3-240ENST00000556339 CKAP4Q07065 602 aaKnown RBP4.15□□□□□ -1.75
ATXN3-240ENST00000556339 MCL1Q07820 350 aa4.15□□□□□ -1.75
ATXN3-240ENST00000556339 GPR17Q13304 367 aa4.15□□□□□ -1.75
ATXN3-240ENST00000556339 TMEM132DQ14C87 1099 aa4.15□□□□□ -1.75
ATXN3-240ENST00000556339 KARSQ15046 597 aaKnown RBP4.15□□□□□ -1.75
ATXN3-240ENST00000556339 NAB2Q15742 525 aa4.15□□□□□ -1.75
ATXN3-240ENST00000556339 LPAL2Q16609 132 aa4.15□□□□□ -1.75
ATXN3-240ENST00000556339 SLC5A9Q2M3M2 681 aa4.15□□□□□ -1.75
ATXN3-240ENST00000556339 SLC39A12Q504Y0 691 aa4.15□□□□□ -1.75
ATXN3-240ENST00000556339 C19orf54Q5BKX5 351 aa4.15□□□□□ -1.75
ATXN3-240ENST00000556339 XKR4Q5GH76 650 aa4.15□□□□□ -1.75
ATXN3-240ENST00000556339 PRAMEF14Q5SWL7 426 aa4.15□□□□□ -1.75
ATXN3-240ENST00000556339 ZNF362Q5T0B9 420 aaPredicted RBP4.15□□□□□ -1.75
ATXN3-240ENST00000556339 ZNF658Q5TYW1 1059 aaPredicted RBP4.15□□□□□ -1.75
ATXN3-240ENST00000556339 RRAGBQ5VZM2 374 aa4.15□□□□□ -1.75
ATXN3-240ENST00000556339 JADE1Q6IE81 842 aa4.15□□□□□ -1.75
ATXN3-240ENST00000556339 SLC8B1Q6J4K2 584 aa4.15□□□□□ -1.75
ATXN3-240ENST00000556339 WDR93Q6P2C0 686 aa4.15□□□□□ -1.75
ATXN3-240ENST00000556339 TSSK4Q6SA08 328 aa4.15□□□□□ -1.75
Retrieved 100 of 20,778 RNA–protein pairs in 34.9 ms