RNA–Protein interactions for RNA: ENST00000555904.1

ABCD4-223, Transcript of ATP binding cassette subfamily D member 4, humanhuman

TSL 3

Gene ABCD4, Length 582 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ABCD4-223ENST00000555904 DNAAF3Q8N9W5 541 aa12.62□□□□□ -0.39
ABCD4-223ENST00000555904 NOA1Q8NC60 698 aaKnown RBP12.62□□□□□ -0.39
ABCD4-223ENST00000555904 LPCAT1Q8NF37 534 aa12.62□□□□□ -0.39
ABCD4-223ENST00000555904 TBL1YQ9BQ87 522 aa12.62□□□□□ -0.39
ABCD4-223ENST00000555904 LRRC1Q9BTT6 524 aa12.62□□□□□ -0.39
ABCD4-223ENST00000555904 FICDQ9BVA6 458 aa12.62□□□□□ -0.39
ABCD4-223ENST00000555904 TRIM31Q9BZY9 425 aa12.62□□□□□ -0.39
ABCD4-223ENST00000555904 PABPC3Q9H361 631 aaKnown RBP12.62□□□□□ -0.39
ABCD4-223ENST00000555904 EPHX3Q9H6B9 360 aa12.62□□□□□ -0.39
ABCD4-223ENST00000555904 EIF2B3Q9NR50 452 aaKnown RBP12.62□□□□□ -0.39
ABCD4-223ENST00000555904 DLGAP2Q9P1A6 1054 aa12.62□□□□□ -0.39
ABCD4-223ENST00000555904 SARDHQ9UL12 918 aa12.62□□□□□ -0.39
ABCD4-223ENST00000555904 TPX2Q9ULW0 747 aaKnown RBP12.62□□□□□ -0.39
ABCD4-223ENST00000555904 CHKBQ9Y259 395 aa12.62□□□□□ -0.39
ABCD4-223ENST00000555904 SHROOM3Q8TF72 1996 aa12.61□□□□□ -0.39
ABCD4-223ENST00000555904 NUP205Q92621 2012 aa12.61□□□□□ -0.39
ABCD4-223ENST00000555904 C16orf96A6NNT2 1141 aa12.61□□□□□ -0.39
ABCD4-223ENST00000555904 SMAPO00193 183 aa12.61□□□□□ -0.39
ABCD4-223ENST00000555904 TRAFD1O14545 582 aaPredicted RBP12.61□□□□□ -0.39
ABCD4-223ENST00000555904 HTRA2O43464 458 aaPredicted RBP12.61□□□□□ -0.39
ABCD4-223ENST00000555904 ZNF217O75362 1048 aa12.61□□□□□ -0.39
ABCD4-223ENST00000555904 HEXIM1O94992 359 aaKnown RBP12.61□□□□□ -0.39
ABCD4-223ENST00000555904 PAPSS2O95340 614 aaPredicted RBP12.61□□□□□ -0.39
ABCD4-223ENST00000555904 NDST3O95803 873 aa12.61□□□□□ -0.39
ABCD4-223ENST00000555904 FGF1P05230 155 aa12.61□□□□□ -0.39
ABCD4-223ENST00000555904 HLA-DPA1P20036 260 aa12.61□□□□□ -0.39
ABCD4-223ENST00000555904 MRPS25P82663 173 aaKnown RBP12.61□□□□□ -0.39
ABCD4-223ENST00000555904 TEX35Q5T0J7 233 aa12.61□□□□□ -0.39
ABCD4-223ENST00000555904 SYCP2LQ5T4T6 812 aa12.61□□□□□ -0.39
ABCD4-223ENST00000555904 IZUMO3Q5VZ72 239 aa12.61□□□□□ -0.39
ABCD4-223ENST00000555904 KDELC1Q6UW63 502 aa12.61□□□□□ -0.39
ABCD4-223ENST00000555904 USP30Q70CQ3 517 aa12.61□□□□□ -0.39
ABCD4-223ENST00000555904 ERN2Q76MJ5 926 aaKnown RBP12.61□□□□□ -0.39
ABCD4-223ENST00000555904 TTC7BQ86TV6 843 aa12.61□□□□□ -0.39
ABCD4-223ENST00000555904 HOOK3Q86VS8 718 aa12.61□□□□□ -0.39
ABCD4-223ENST00000555904 HDDC3Q8N4P3 179 aa12.61□□□□□ -0.39
ABCD4-223ENST00000555904 MDGA1Q8NFP4 955 aa12.61□□□□□ -0.39
ABCD4-223ENST00000555904 TADA1Q96BN2 335 aa12.61□□□□□ -0.39
ABCD4-223ENST00000555904 ECHDC3Q96DC8 303 aa12.61□□□□□ -0.39
ABCD4-223ENST00000555904 SPACA7Q96KW9 195 aa12.61□□□□□ -0.39
ABCD4-223ENST00000555904 MLPHQ9BV36 600 aaPredicted RBP12.61□□□□□ -0.39
ABCD4-223ENST00000555904 C1QTNF1Q9BXJ1 281 aa12.61□□□□□ -0.39
ABCD4-223ENST00000555904 HDAC8Q9BY41 377 aa12.61□□□□□ -0.39
ABCD4-223ENST00000555904 CD248Q9HCU0 757 aa12.61□□□□□ -0.39
ABCD4-223ENST00000555904 POLR3BQ9NW08 1133 aaPredicted RBP12.61□□□□□ -0.39
ABCD4-223ENST00000555904 FBXL12Q9NXK8 326 aa12.61□□□□□ -0.39
ABCD4-223ENST00000555904 FZD4Q9ULV1 537 aa12.61□□□□□ -0.39
ABCD4-223ENST00000555904 A0A1W2PP55 124 aa12.6□□□□□ -0.39
ABCD4-223ENST00000555904 TSPAN11A1L157 253 aa12.6□□□□□ -0.39
ABCD4-223ENST00000555904 FAM86C2PA6NEL3 165 aa12.6□□□□□ -0.39
ABCD4-223ENST00000555904 PRR33A8MZF0 331 aa12.6□□□□□ -0.39
ABCD4-223ENST00000555904 UPK3BL1B0FP48 263 aa12.6□□□□□ -0.39
ABCD4-223ENST00000555904 UPK3BL2E5RIL1 263 aa12.6□□□□□ -0.39
ABCD4-223ENST00000555904 NEMP1O14524 444 aa12.6□□□□□ -0.39
ABCD4-223ENST00000555904 DNALI1O14645 258 aaPredicted RBP12.6□□□□□ -0.39
ABCD4-223ENST00000555904 SLC7A4O43246 635 aa12.6□□□□□ -0.39
ABCD4-223ENST00000555904 ADRB3P13945 408 aa12.6□□□□□ -0.39
ABCD4-223ENST00000555904 ITIH2P19823 946 aa12.6□□□□□ -0.39
ABCD4-223ENST00000555904 TPSB2P20231 275 aa12.6□□□□□ -0.39
ABCD4-223ENST00000555904 SLC7A5Q01650 507 aa12.6□□□□□ -0.39
ABCD4-223ENST00000555904 GUCY2DQ02846 1103 aa12.6□□□□□ -0.39
ABCD4-223ENST00000555904 CAV1Q03135 178 aa12.6□□□□□ -0.39
ABCD4-223ENST00000555904 ELP6Q0PNE2 266 aa12.6□□□□□ -0.39
ABCD4-223ENST00000555904 CNTN1Q12860 1018 aa12.6□□□□□ -0.39
ABCD4-223ENST00000555904 GALNT3Q14435 633 aa12.6□□□□□ -0.39
ABCD4-223ENST00000555904 SPARCL1Q14515 664 aa12.6□□□□□ -0.39
ABCD4-223ENST00000555904 MORF4L2Q15014 288 aa12.6□□□□□ -0.39
ABCD4-223ENST00000555904 TPSAB1Q15661 275 aa12.6□□□□□ -0.39
ABCD4-223ENST00000555904 SLC1A5Q15758 541 aa12.6□□□□□ -0.39
ABCD4-223ENST00000555904 UGP2Q16851 508 aa12.6□□□□□ -0.39
ABCD4-223ENST00000555904 KCTD19Q17RG1 926 aaPredicted RBP12.6□□□□□ -0.39
ABCD4-223ENST00000555904 PARS2Q7L3T8 475 aaKnown RBP12.6□□□□□ -0.39
ABCD4-223ENST00000555904 C1orf210Q8IVY1 113 aa12.6□□□□□ -0.39
ABCD4-223ENST00000555904 SLC25A41Q8N5S1 370 aa12.6□□□□□ -0.39
ABCD4-223ENST00000555904 TMEM105Q8N8V8 129 aa12.6□□□□□ -0.39
ABCD4-223ENST00000555904 DTWD2Q8NBA8 298 aa12.6□□□□□ -0.39
ABCD4-223ENST00000555904 SPOCK2Q92563 424 aa12.6□□□□□ -0.39
ABCD4-223ENST00000555904 RAB7BQ96AH8 199 aa12.6□□□□□ -0.39
ABCD4-223ENST00000555904 MRGPRX2Q96LB1 330 aa12.6□□□□□ -0.39
ABCD4-223ENST00000555904 SRPK1Q96SB4 655 aaKnown RBP12.6□□□□□ -0.39
ABCD4-223ENST00000555904 GORASP1Q9BQQ3 440 aa12.6□□□□□ -0.39
ABCD4-223ENST00000555904 FRMD8Q9BZ67 464 aaPredicted RBP12.6□□□□□ -0.39
ABCD4-223ENST00000555904 SLC6A17Q9H1V8 727 aa12.6□□□□□ -0.39
ABCD4-223ENST00000555904 DPH5Q9H2P9 285 aa12.6□□□□□ -0.39
ABCD4-223ENST00000555904 ANAPC5Q9UJX4 755 aa12.6□□□□□ -0.39
ABCD4-223ENST00000555904 PHTF1Q9UMS5 762 aa12.6□□□□□ -0.39
ABCD4-223ENST00000555904 SHOC2Q9UQ13 582 aa12.6□□□□□ -0.39
ABCD4-223ENST00000555904 F5P12259 2224 aa12.6□□□□□ -0.39
ABCD4-223ENST00000555904 LOC285095A0A1B0GVY8 99 aa12.59□□□□□ -0.39
ABCD4-223ENST00000555904 ANKRD66B4E2M5 251 aa12.59□□□□□ -0.39
ABCD4-223ENST00000555904 RIOK3O14730 519 aaKnown RBP12.59□□□□□ -0.39
ABCD4-223ENST00000555904 USP12O75317 370 aa12.59□□□□□ -0.39
ABCD4-223ENST00000555904 SUN1O94901 812 aa12.59□□□□□ -0.39
ABCD4-223ENST00000555904 SEC31AO94979 1220 aaKnown RBP12.59□□□□□ -0.39
ABCD4-223ENST00000555904 AGTP01019 485 aa12.59□□□□□ -0.39
ABCD4-223ENST00000555904 RHOXF2BP0C7M4 288 aa12.59□□□□□ -0.39
ABCD4-223ENST00000555904 CYP2A6P11509 494 aaPredicted RBP12.59□□□□□ -0.39
ABCD4-223ENST00000555904 OXTRP30559 389 aa12.59□□□□□ -0.39
ABCD4-223ENST00000555904 P2RY2P41231 377 aa12.59□□□□□ -0.39
ABCD4-223ENST00000555904 MAGEA6P43360 314 aa12.59□□□□□ -0.39
Retrieved 100 of 20,778 RNA–protein pairs in 41.7 ms