RNA–Protein interactions for RNA: ENST00000555890.5

SLIRP-204, Transcript of SRA stem-loop interacting RNA binding protein, humanhuman

TSL 2

Gene SLIRP, Length 471 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SLIRP-204ENST00000555890 BNIP3LO60238 219 aa6.95□□□□□ -1.3
SLIRP-204ENST00000555890 SPAG6O75602 509 aa6.95□□□□□ -1.3
SLIRP-204ENST00000555890 SMNDC1O75940 238 aaKnown RBP eCLIP6.95□□□□□ -1.3
SLIRP-204ENST00000555890 FGF18O76093 207 aa6.95□□□□□ -1.3
SLIRP-204ENST00000555890 ATE1O95260 518 aa6.95□□□□□ -1.3
SLIRP-204ENST00000555890 B3GALT4O96024 378 aa6.95□□□□□ -1.3
SLIRP-204ENST00000555890 GHRHP01286 108 aa6.95□□□□□ -1.3
SLIRP-204ENST00000555890 IGLV3-25P01717 112 aa6.95□□□□□ -1.3
SLIRP-204ENST00000555890 THBS1P07996 1170 aa6.95□□□□□ -1.3
SLIRP-204ENST00000555890 SRGAP2BP0DMP2 458 aa6.95□□□□□ -1.3
SLIRP-204ENST00000555890 ERCC2P18074 760 aa6.95□□□□□ -1.3
SLIRP-204ENST00000555890 TPSB2P20231 275 aa6.95□□□□□ -1.3
SLIRP-204ENST00000555890 EPHB2P29323 1055 aa6.95□□□□□ -1.3
SLIRP-204ENST00000555890 GLUD2P49448 558 aa6.95□□□□□ -1.3
SLIRP-204ENST00000555890 KPNA1P52294 538 aaPredicted RBP6.95□□□□□ -1.3
SLIRP-204ENST00000555890 PPP2R2AP63151 447 aa6.95□□□□□ -1.3
SLIRP-204ENST00000555890 PCDH1Q08174 1060 aa6.95□□□□□ -1.3
SLIRP-204ENST00000555890 AP1B1Q10567 949 aa6.95□□□□□ -1.3
SLIRP-204ENST00000555890 SLC10A2Q12908 348 aaPredicted RBP6.95□□□□□ -1.3
SLIRP-204ENST00000555890 SEMA3BQ13214 749 aa6.95□□□□□ -1.3
SLIRP-204ENST00000555890 KCNJ11Q14654 390 aa6.95□□□□□ -1.3
SLIRP-204ENST00000555890 TPSAB1Q15661 275 aa6.95□□□□□ -1.3
SLIRP-204ENST00000555890 PSMD5Q16401 504 aa6.95□□□□□ -1.3
SLIRP-204ENST00000555890 BBS9Q3SYG4 887 aa6.95□□□□□ -1.3
SLIRP-204ENST00000555890 MGAT5BQ3V5L5 792 aa6.95□□□□□ -1.3
SLIRP-204ENST00000555890 DNAJC21Q5F1R6 531 aaKnown RBP6.95□□□□□ -1.3
SLIRP-204ENST00000555890 RTP2Q5QGT7 225 aa6.95□□□□□ -1.3
SLIRP-204ENST00000555890 ACBD5Q5T8D3 534 aaPredicted RBP6.95□□□□□ -1.3
SLIRP-204ENST00000555890 HIST2H2BCQ6DN03 193 aa6.95□□□□□ -1.3
SLIRP-204ENST00000555890 MSANTD2Q6P1R3 559 aa6.95□□□□□ -1.3
SLIRP-204ENST00000555890 LEKR1Q6ZMV7 388 aa6.95□□□□□ -1.3
SLIRP-204ENST00000555890 DENND5BQ6ZUT9 1274 aa6.95□□□□□ -1.3
SLIRP-204ENST00000555890 B4GALNT4Q76KP1 1039 aa6.95□□□□□ -1.3
SLIRP-204ENST00000555890 PALM2Q8IXS6 379 aa6.95□□□□□ -1.3
SLIRP-204ENST00000555890 ZBED8Q8IZ13 594 aa6.95□□□□□ -1.3
SLIRP-204ENST00000555890 TAB3Q8N5C8 712 aaPredicted RBP6.95□□□□□ -1.3
SLIRP-204ENST00000555890 SH2D3CQ8N5H7 860 aa6.95□□□□□ -1.3
SLIRP-204ENST00000555890 LZTR1Q8N653 840 aa6.95□□□□□ -1.3
SLIRP-204ENST00000555890 C12orf76Q8N812 135 aaPredicted RBP6.95□□□□□ -1.3
SLIRP-204ENST00000555890 ATP11CQ8NB49 1132 aa6.95□□□□□ -1.3
SLIRP-204ENST00000555890 ATAD1Q8NBU5 361 aa6.95□□□□□ -1.3
SLIRP-204ENST00000555890 MCUQ8NE86 351 aa6.95□□□□□ -1.3
SLIRP-204ENST00000555890 ST13P5Q8NFI4 369 aaPredicted RBP6.95□□□□□ -1.3
SLIRP-204ENST00000555890 PJA1Q8NG27 643 aa6.95□□□□□ -1.3
SLIRP-204ENST00000555890 FBXO32Q969P5 355 aa6.95□□□□□ -1.3
SLIRP-204ENST00000555890 WBP1Q96G27 269 aa6.95□□□□□ -1.3
SLIRP-204ENST00000555890 IGSF21Q96ID5 467 aa6.95□□□□□ -1.3
SLIRP-204ENST00000555890 C9orf72Q96LT7 481 aa6.95□□□□□ -1.3
SLIRP-204ENST00000555890 PWWP2AQ96N64 755 aa6.95□□□□□ -1.3
SLIRP-204ENST00000555890 SPATA13Q96N96 652 aa6.95□□□□□ -1.3
SLIRP-204ENST00000555890 ZNF558Q96NG5 402 aa6.95□□□□□ -1.3
SLIRP-204ENST00000555890 OLFM3Q96PB7 478 aa6.95□□□□□ -1.3
SLIRP-204ENST00000555890 CDK5RAP1Q96SZ6 601 aaKnown RBP6.95□□□□□ -1.3
SLIRP-204ENST00000555890 SEPT5Q99719 369 aaPredicted RBP6.95□□□□□ -1.3
SLIRP-204ENST00000555890 MAGEB5Q9BZ81 275 aa6.95□□□□□ -1.3
SLIRP-204ENST00000555890 TRIM4Q9C037 500 aa6.95□□□□□ -1.3
SLIRP-204ENST00000555890 CWH43Q9H720 699 aa6.95□□□□□ -1.3
SLIRP-204ENST00000555890 CATSPERBQ9H7T0 1116 aa6.95□□□□□ -1.3
SLIRP-204ENST00000555890 VPS37BQ9H9H4 285 aa6.95□□□□□ -1.3
SLIRP-204ENST00000555890 NDFIP2Q9NV92 336 aa6.95□□□□□ -1.3
SLIRP-204ENST00000555890 ETNK2Q9NVF9 386 aa6.95□□□□□ -1.3
SLIRP-204ENST00000555890 DNAJC17Q9NVM6 304 aaKnown RBP6.95□□□□□ -1.3
SLIRP-204ENST00000555890 DONSONQ9NYP3 566 aa6.95□□□□□ -1.3
SLIRP-204ENST00000555890 ZKSCAN7Q9P0L1 754 aaPredicted RBP6.95□□□□□ -1.3
SLIRP-204ENST00000555890 MTRRQ9UBK8 725 aa6.95□□□□□ -1.3
SLIRP-204ENST00000555890 DNMT3LQ9UJW3 386 aa6.95□□□□□ -1.3
SLIRP-204ENST00000555890 CA14Q9ULX7 337 aa6.95□□□□□ -1.3
SLIRP-204ENST00000555890 ANKHD1Q8IWZ3 2542 aaKnown RBP6.95□□□□□ -1.3
SLIRP-204ENST00000555890 STAB1Q9NY15 2570 aa6.95□□□□□ -1.3
SLIRP-204ENST00000555890 SDK1Q7Z5N4 2213 aa6.95□□□□□ -1.3
SLIRP-204ENST00000555890 NUP205Q92621 2012 aa6.94□□□□□ -1.3
SLIRP-204ENST00000555890 EXOC1LA0A1B0GW35 172 aa6.94□□□□□ -1.3
SLIRP-204ENST00000555890 FAM92AA1XBS5 289 aa6.94□□□□□ -1.3
SLIRP-204ENST00000555890 SLC38A8A6NNN8 435 aa6.94□□□□□ -1.3
SLIRP-204ENST00000555890 KCNU1A8MYU2 1149 aa6.94□□□□□ -1.3
SLIRP-204ENST00000555890 E7ESA3 106 aa6.94□□□□□ -1.3
SLIRP-204ENST00000555890 DCLK1O15075 740 aa6.94□□□□□ -1.3
SLIRP-204ENST00000555890 PSMD3O43242 534 aa6.94□□□□□ -1.3
SLIRP-204ENST00000555890 MFSD11O43934 449 aa6.94□□□□□ -1.3
SLIRP-204ENST00000555890 OPHN1O60890 802 aa6.94□□□□□ -1.3
SLIRP-204ENST00000555890 CDH16O75309 829 aa6.94□□□□□ -1.3
SLIRP-204ENST00000555890 APOEP02649 317 aa6.94□□□□□ -1.3
SLIRP-204ENST00000555890 GSTA2P09210 222 aa6.94□□□□□ -1.3
SLIRP-204ENST00000555890 LAG3P18627 525 aa6.94□□□□□ -1.3
SLIRP-204ENST00000555890 ARNTP27540 789 aa6.94□□□□□ -1.3
SLIRP-204ENST00000555890 HPDP32754 393 aaPredicted RBP6.94□□□□□ -1.3
SLIRP-204ENST00000555890 OR1D2P34982 312 aa6.94□□□□□ -1.3
SLIRP-204ENST00000555890 IL12RB1P42701 662 aa6.94□□□□□ -1.3
SLIRP-204ENST00000555890 MAGEA6P43360 314 aa6.94□□□□□ -1.3
SLIRP-204ENST00000555890 SLCO1A2P46721 670 aa6.94□□□□□ -1.3
SLIRP-204ENST00000555890 GPR15P49685 360 aa6.94□□□□□ -1.3
SLIRP-204ENST00000555890 TBX4P57082 545 aa6.94□□□□□ -1.3
SLIRP-204ENST00000555890 MAGOHP61326 146 aaKnown RBP6.94□□□□□ -1.3
SLIRP-204ENST00000555890 GNGT1P63211 74 aa6.94□□□□□ -1.3
SLIRP-204ENST00000555890 CDK16Q00536 496 aa6.94□□□□□ -1.3
SLIRP-204ENST00000555890 NRG1Q02297 640 aaPredicted RBP6.94□□□□□ -1.3
SLIRP-204ENST00000555890 RPL6Q02878 288 aaKnown RBP6.94□□□□□ -1.3
SLIRP-204ENST00000555890 ZNF33AQ06730 810 aa6.94□□□□□ -1.3
SLIRP-204ENST00000555890 DUSP4Q13115 394 aa6.94□□□□□ -1.3
SLIRP-204ENST00000555890 EIF4EBP2Q13542 120 aaPredicted RBP6.94□□□□□ -1.3
Retrieved 100 of 20,778 RNA–protein pairs in 25.6 ms